RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 PHACTR3Q96KR7 559 aa25.49■■□□□ 1.67
MMP28-201ENST00000605424 STRCQ7RTU9 1775 aa25.48■■□□□ 1.67
MMP28-201ENST00000605424 PMFBP1Q8TBY8 1022 aa25.48■■□□□ 1.67
MMP28-201ENST00000605424 ALDH1L2Q3SY69 923 aa25.47■■□□□ 1.67
MMP28-201ENST00000605424 BCL2L13Q9BXK5 485 aa25.47■■□□□ 1.67
MMP28-201ENST00000605424 SMC4Q9NTJ3 1288 aa25.47■■□□□ 1.67
MMP28-201ENST00000605424 NUTM2FA1L443 756 aa25.46■■□□□ 1.67
MMP28-201ENST00000605424 RLBP1P12271 317 aa25.45■■□□□ 1.67
MMP28-201ENST00000605424 DZIP1LQ8IYY4 767 aaKnown RBP25.45■■□□□ 1.66
MMP28-201ENST00000605424 IFT57Q9NWB7 429 aa25.45■■□□□ 1.66
MMP28-201ENST00000605424 GNAI1P63096 354 aa25.44■■□□□ 1.66
MMP28-201ENST00000605424 MVPQ14764 893 aaKnown RBP25.44■■□□□ 1.66
MMP28-201ENST00000605424 SSH1Q8WYL5 1049 aa25.44■■□□□ 1.66
MMP28-201ENST00000605424 NPHP4O75161 1426 aaPredicted RBP25.44■■□□□ 1.66
MMP28-201ENST00000605424 BRPF1P55201 1214 aaPredicted RBP25.43■■□□□ 1.66
MMP28-201ENST00000605424 KIF16BQ96L93 1317 aa25.43■■□□□ 1.66
MMP28-201ENST00000605424 IGHDP01880 384 aa25.43■■□□□ 1.66
MMP28-201ENST00000605424 KCNA6P17658 529 aa25.43■■□□□ 1.66
MMP28-201ENST00000605424 AEBP2Q6ZN18 517 aaPredicted RBP25.43■■□□□ 1.66
MMP28-201ENST00000605424 ERICH6Q7L0X2 663 aa25.43■■□□□ 1.66
MMP28-201ENST00000605424 FTSJ3Q8IY81 847 aaKnown RBP25.43■■□□□ 1.66
MMP28-201ENST00000605424 NGDNQ8NEJ9 315 aaKnown RBP25.43■■□□□ 1.66
MMP28-201ENST00000605424 IPO9Q96P70 1041 aaKnown RBP25.43■■□□□ 1.66
MMP28-201ENST00000605424 IPO8O15397 1037 aaKnown RBP25.42■■□□□ 1.66
MMP28-201ENST00000605424 EIF4A2Q14240 407 aaKnown RBP25.42■■□□□ 1.66
MMP28-201ENST00000605424 FMN2Q9NZ56 1722 aa25.41■■□□□ 1.66
MMP28-201ENST00000605424 ZNF853P0CG23 659 aa25.41■■□□□ 1.66
MMP28-201ENST00000605424 ATF7IPQ6VMQ6 1270 aa25.41■■□□□ 1.66
MMP28-201ENST00000605424 RGPD8O14715 1765 aaPredicted RBP25.4■■□□□ 1.66
MMP28-201ENST00000605424 CHD2O14647 1828 aaKnown RBP25.39■■□□□ 1.66
MMP28-201ENST00000605424 TNNQ9UQP3 1299 aa25.39■■□□□ 1.65
MMP28-201ENST00000605424 DLG5Q8TDM6 1919 aa25.38■■□□□ 1.65
MMP28-201ENST00000605424 TRIM27P14373 513 aa25.37■■□□□ 1.65
MMP28-201ENST00000605424 FAM161AQ3B820 660 aa25.37■■□□□ 1.65
MMP28-201ENST00000605424 SKAP1Q86WV1 359 aa25.37■■□□□ 1.65
MMP28-201ENST00000605424 DDX19BQ9UMR2 479 aa25.37■■□□□ 1.65
MMP28-201ENST00000605424 RGPD1P0DJD0 1748 aa25.37■■□□□ 1.65
MMP28-201ENST00000605424 PEAK1Q9H792 1746 aa25.37■■□□□ 1.65
MMP28-201ENST00000605424 CFAP44Q96MT7 982 aa25.37■■□□□ 1.65
MMP28-201ENST00000605424 RWDD1Q9H446 243 aaPredicted RBP25.37■■□□□ 1.65
MMP28-201ENST00000605424 SBNO1A3KN83 1393 aa25.36■■□□□ 1.65
MMP28-201ENST00000605424 NOB1Q9ULX3 412 aaKnown RBP25.35■■□□□ 1.65
MMP28-201ENST00000605424 NOP58Q9Y2X3 529 aaKnown RBP25.35■■□□□ 1.65
MMP28-201ENST00000605424 SULT6B1Q6IMI4 303 aa25.35■■□□□ 1.65
MMP28-201ENST00000605424 PCDHB15Q9Y5E8 787 aa25.35■■□□□ 1.65
MMP28-201ENST00000605424 FLT4P35916 1363 aa25.35■■□□□ 1.65
MMP28-201ENST00000605424 KIF24Q5T7B8 1368 aa25.35■■□□□ 1.65
MMP28-201ENST00000605424 USP54Q70EL1 1684 aa25.34■■□□□ 1.65
MMP28-201ENST00000605424 LAS1LQ9Y4W2 734 aaKnown RBP25.34■■□□□ 1.65
MMP28-201ENST00000605424 ARHGEF10O15013 1369 aa25.34■■□□□ 1.65
MMP28-201ENST00000605424 PIK3C2AO00443 1686 aa25.33■■□□□ 1.65
MMP28-201ENST00000605424 MAP3K19Q56UN5 1328 aa25.33■■□□□ 1.65
MMP28-201ENST00000605424 HSP90AB2PQ58FF8 381 aa25.33■■□□□ 1.65
MMP28-201ENST00000605424 VAMP4O75379 141 aa25.32■■□□□ 1.64
MMP28-201ENST00000605424 ARHGAP45Q92619 1136 aa25.32■■□□□ 1.64
MMP28-201ENST00000605424 RGS3P49796 1198 aa25.31■■□□□ 1.64
MMP28-201ENST00000605424 MBIPQ9NS73 344 aa25.31■■□□□ 1.64
MMP28-201ENST00000605424 THUMPD2Q9BTF0 503 aaKnown RBP25.3■■□□□ 1.64
MMP28-201ENST00000605424 C8orf34Q49A92 452 aa25.29■■□□□ 1.64
MMP28-201ENST00000605424 ZBTB47Q9UFB7 747 aaPredicted RBP25.29■■□□□ 1.64
MMP28-201ENST00000605424 HAP1P54257 671 aaPredicted RBP25.28■■□□□ 1.64
MMP28-201ENST00000605424 AEBP1Q8IUX7 1158 aa25.28■■□□□ 1.64
MMP28-201ENST00000605424 CHMP4BQ9H444 224 aaKnown RBP25.28■■□□□ 1.64
MMP28-201ENST00000605424 ITPRIPQ8IWB1 547 aa25.27■■□□□ 1.64
MMP28-201ENST00000605424 NLRP6P59044 892 aa25.27■■□□□ 1.64
MMP28-201ENST00000605424 KDRP35968 1356 aa25.27■■□□□ 1.64
MMP28-201ENST00000605424 HDAC1Q13547 482 aaPredicted RBP25.26■■□□□ 1.63
MMP28-201ENST00000605424 MRPL50Q8N5N7 158 aaKnown RBP25.26■■□□□ 1.63
MMP28-201ENST00000605424 AMPHP49418 695 aa25.25■■□□□ 1.63
MMP28-201ENST00000605424 TWISTNBQ3B726 338 aaPredicted RBP25.25■■□□□ 1.63
MMP28-201ENST00000605424 TMEM57Q8N5G2 664 aa25.25■■□□□ 1.63
MMP28-201ENST00000605424 ADGRL3Q9HAR2 1447 aa25.25■■□□□ 1.63
MMP28-201ENST00000605424 NPM2Q86SE8 214 aaKnown RBP25.24■■□□□ 1.63
MMP28-201ENST00000605424 PHF8Q9UPP1 1060 aa25.24■■□□□ 1.63
MMP28-201ENST00000605424 DDRGK1Q96HY6 314 aa25.24■■□□□ 1.63
MMP28-201ENST00000605424 ZBTB40Q9NUA8 1239 aa25.24■■□□□ 1.63
MMP28-201ENST00000605424 FAM83GA6ND36 823 aa25.23■■□□□ 1.63
MMP28-201ENST00000605424 IGSF1Q8N6C5 1336 aa25.23■■□□□ 1.63
MMP28-201ENST00000605424 STRCP1A6NGW2 1772 aa25.23■■□□□ 1.63
MMP28-201ENST00000605424 TSPYL6Q8N831 410 aa25.22■■□□□ 1.63
MMP28-201ENST00000605424 MARF1Q9Y4F3 1742 aaKnown RBP25.22■■□□□ 1.63
MMP28-201ENST00000605424 SOX12O15370 315 aa25.22■■□□□ 1.63
MMP28-201ENST00000605424 CHL1O00533 1208 aa25.21■■□□□ 1.63
MMP28-201ENST00000605424 RBM33Q96EV2 1170 aaKnown RBP25.21■■□□□ 1.63
MMP28-201ENST00000605424 ABTB2Q8N961 1025 aa25.2■■□□□ 1.62
MMP28-201ENST00000605424 PDZRN3Q9UPQ7 1066 aa25.2■■□□□ 1.62
MMP28-201ENST00000605424 KIAA0232Q92628 1395 aa25.2■■□□□ 1.62
MMP28-201ENST00000605424 VIRMAQ69YN4 1812 aaKnown RBP25.2■■□□□ 1.62
MMP28-201ENST00000605424 DCTN1Q14203 1278 aa25.19■■□□□ 1.62
MMP28-201ENST00000605424 C8orf58Q8NAV2 365 aa25.19■■□□□ 1.62
MMP28-201ENST00000605424 ZNF335Q9H4Z2 1342 aaPredicted RBP25.19■■□□□ 1.62
MMP28-201ENST00000605424 RTL1A6NKG5 1358 aa25.19■■□□□ 1.62
MMP28-201ENST00000605424 GAS2L2Q8NHY3 880 aa25.18■■□□□ 1.62
MMP28-201ENST00000605424 EYA1Q99502 592 aa25.18■■□□□ 1.62
MMP28-201ENST00000605424 API5Q9BZZ5 524 aaKnown RBP25.18■■□□□ 1.62
MMP28-201ENST00000605424 HTATSF1O43719 755 aaKnown RBP25.17■■□□□ 1.62
MMP28-201ENST00000605424 PAK3O75914 559 aaPredicted RBP25.17■■□□□ 1.62
MMP28-201ENST00000605424 HOXC9P31274 260 aa25.17■■□□□ 1.62
MMP28-201ENST00000605424 ABCC4O15439 1325 aa25.16■■□□□ 1.62
MMP28-201ENST00000605424 NWD1Q149M9 1564 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms