RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 RLBP1P12271 317 aa19.41■□□□□ 0.7
CCDC12-211ENST00000604367 NUTM2GQ5VZR2 741 aa19.41■□□□□ 0.7
CCDC12-211ENST00000604367 SULT6B1Q6IMI4 303 aa19.41■□□□□ 0.7
CCDC12-211ENST00000604367 SMC4Q9NTJ3 1288 aa19.41■□□□□ 0.7
CCDC12-211ENST00000604367 USP31Q70CQ4 1352 aa19.4■□□□□ 0.7
CCDC12-211ENST00000604367 CHD2O14647 1828 aaKnown RBP19.4■□□□□ 0.7
CCDC12-211ENST00000604367 CT47B1P0C2W7 299 aaPredicted RBP19.4■□□□□ 0.7
CCDC12-211ENST00000604367 ANKARQ7Z5J8 1434 aa19.39■□□□□ 0.69
CCDC12-211ENST00000604367 MAP3K19Q56UN5 1328 aa19.39■□□□□ 0.69
CCDC12-211ENST00000604367 PAK3O75914 559 aaPredicted RBP19.39■□□□□ 0.69
CCDC12-211ENST00000604367 NLRP6P59044 892 aa19.39■□□□□ 0.69
CCDC12-211ENST00000604367 SSH1Q8WYL5 1049 aa19.39■□□□□ 0.69
CCDC12-211ENST00000604367 NALCNQ8IZF0 1738 aa19.38■□□□□ 0.69
CCDC12-211ENST00000604367 PEAK1Q9H792 1746 aa19.38■□□□□ 0.69
CCDC12-211ENST00000604367 FMN2Q9NZ56 1722 aa19.38■□□□□ 0.69
CCDC12-211ENST00000604367 FAM83GA6ND36 823 aa19.37■□□□□ 0.69
CCDC12-211ENST00000604367 ZKSCAN2Q63HK3 967 aa19.36■□□□□ 0.69
CCDC12-211ENST00000604367 C14orf37Q86TY3 774 aa19.36■□□□□ 0.69
CCDC12-211ENST00000604367 DCTN1Q14203 1278 aa19.35■□□□□ 0.69
CCDC12-211ENST00000604367 ABTB2Q8N961 1025 aa19.35■□□□□ 0.69
CCDC12-211ENST00000604367 NPHP4O75161 1426 aaPredicted RBP19.35■□□□□ 0.69
CCDC12-211ENST00000604367 AMPHP49418 695 aa19.35■□□□□ 0.69
CCDC12-211ENST00000604367 FTSJ3Q8IY81 847 aaKnown RBP19.35■□□□□ 0.69
CCDC12-211ENST00000604367 PIK3C2AO00443 1686 aa19.35■□□□□ 0.69
CCDC12-211ENST00000604367 IGHDP01880 384 aa19.34■□□□□ 0.69
CCDC12-211ENST00000604367 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
CCDC12-211ENST00000604367 BCL11AQ9H165 835 aa19.34■□□□□ 0.69
CCDC12-211ENST00000604367 PHF8Q9UPP1 1060 aa19.34■□□□□ 0.69
CCDC12-211ENST00000604367 DLG5Q8TDM6 1919 aa19.34■□□□□ 0.69
CCDC12-211ENST00000604367 MSH5O43196 834 aa19.33■□□□□ 0.69
CCDC12-211ENST00000604367 PDE4AP27815 886 aa19.33■□□□□ 0.69
CCDC12-211ENST00000604367 LMOD3Q0VAK6 560 aa19.33■□□□□ 0.68
CCDC12-211ENST00000604367 DZIP1LQ8IYY4 767 aaKnown RBP19.33■□□□□ 0.68
CCDC12-211ENST00000604367 MS4A1P11836 297 aa19.32■□□□□ 0.68
CCDC12-211ENST00000604367 TRIM27P14373 513 aa19.32■□□□□ 0.68
CCDC12-211ENST00000604367 GNAI1P63096 354 aa19.32■□□□□ 0.68
CCDC12-211ENST00000604367 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
CCDC12-211ENST00000604367 NOB1Q9ULX3 412 aaKnown RBP19.32■□□□□ 0.68
CCDC12-211ENST00000604367 ELL2O00472 640 aaPredicted RBP19.32■□□□□ 0.68
CCDC12-211ENST00000604367 MBIPQ9NS73 344 aa19.32■□□□□ 0.68
CCDC12-211ENST00000604367 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
CCDC12-211ENST00000604367 FLT4P35916 1363 aa19.32■□□□□ 0.68
CCDC12-211ENST00000604367 SBNO1A3KN83 1393 aa19.31■□□□□ 0.68
CCDC12-211ENST00000604367 RGS3P49796 1198 aa19.3■□□□□ 0.68
CCDC12-211ENST00000604367 MVPQ14764 893 aaKnown RBP19.3■□□□□ 0.68
CCDC12-211ENST00000604367 ATF7IPQ6VMQ6 1270 aa19.3■□□□□ 0.68
CCDC12-211ENST00000604367 TSPYL6Q8N831 410 aa19.3■□□□□ 0.68
CCDC12-211ENST00000604367 ADGRL3Q9HAR2 1447 aa19.29■□□□□ 0.68
CCDC12-211ENST00000604367 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
CCDC12-211ENST00000604367 PCDHB15Q9Y5E8 787 aa19.29■□□□□ 0.68
CCDC12-211ENST00000604367 BACH2Q9BYV9 841 aa19.29■□□□□ 0.68
CCDC12-211ENST00000604367 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
CCDC12-211ENST00000604367 PSME1Q06323 249 aa19.27■□□□□ 0.68
CCDC12-211ENST00000604367 VAMP4O75379 141 aa19.27■□□□□ 0.68
CCDC12-211ENST00000604367 MCM10Q7L590 875 aa19.27■□□□□ 0.68
CCDC12-211ENST00000604367 ALDH1L2Q3SY69 923 aa19.26■□□□□ 0.67
CCDC12-211ENST00000604367 ITPRIPQ8IWB1 547 aa19.26■□□□□ 0.67
CCDC12-211ENST00000604367 EYA1Q99502 592 aa19.26■□□□□ 0.67
CCDC12-211ENST00000604367 RGPD1P0DJD0 1748 aa19.26■□□□□ 0.67
CCDC12-211ENST00000604367 KIF16BQ96L93 1317 aa19.26■□□□□ 0.67
CCDC12-211ENST00000604367 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
CCDC12-211ENST00000604367 LTV1Q96GA3 475 aaPredicted RBP19.25■□□□□ 0.67
CCDC12-211ENST00000604367 ARHGEF10O15013 1369 aa19.25■□□□□ 0.67
CCDC12-211ENST00000604367 PLEKHG5O94827 1062 aa19.25■□□□□ 0.67
CCDC12-211ENST00000604367 HOXC9P31274 260 aa19.25■□□□□ 0.67
CCDC12-211ENST00000604367 AAMPQ13685 434 aa19.25■□□□□ 0.67
CCDC12-211ENST00000604367 C8orf58Q8NAV2 365 aa19.25■□□□□ 0.67
CCDC12-211ENST00000604367 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
CCDC12-211ENST00000604367 IPO8O15397 1037 aaKnown RBP19.24■□□□□ 0.67
CCDC12-211ENST00000604367 FOXO3O43524 673 aa19.24■□□□□ 0.67
CCDC12-211ENST00000604367 TWISTNBQ3B726 338 aaPredicted RBP19.24■□□□□ 0.67
CCDC12-211ENST00000604367 ANP32AP39687 249 aaKnown RBP19.24■□□□□ 0.67
CCDC12-211ENST00000604367 XPCQ01831 940 aaPredicted RBP19.24■□□□□ 0.67
CCDC12-211ENST00000604367 PROSER2Q86WR7 435 aaPredicted RBP19.24■□□□□ 0.67
CCDC12-211ENST00000604367 TMEM57Q8N5G2 664 aa19.24■□□□□ 0.67
CCDC12-211ENST00000604367 MARF1Q9Y4F3 1742 aaKnown RBP19.24■□□□□ 0.67
CCDC12-211ENST00000604367 ZNF428Q96B54 188 aa19.23■□□□□ 0.67
CCDC12-211ENST00000604367 MTHFSDQ2M296 383 aaKnown RBP19.23■□□□□ 0.67
CCDC12-211ENST00000604367 KDM4FA0A1W2PPD8 638 aa19.22■□□□□ 0.67
CCDC12-211ENST00000604367 DDX19BQ9UMR2 479 aa19.22■□□□□ 0.67
CCDC12-211ENST00000604367 IGSF1Q8N6C5 1336 aa19.22■□□□□ 0.67
CCDC12-211ENST00000604367 ZBTB7CA1YPR0 619 aa19.21■□□□□ 0.67
CCDC12-211ENST00000604367 MRPL50Q8N5N7 158 aaKnown RBP19.2■□□□□ 0.66
CCDC12-211ENST00000604367 KDRP35968 1356 aa19.2■□□□□ 0.66
CCDC12-211ENST00000604367 KRT24Q2M2I5 525 aa19.2■□□□□ 0.66
CCDC12-211ENST00000604367 LMOD2Q6P5Q4 547 aa19.19■□□□□ 0.66
CCDC12-211ENST00000604367 RTF1Q92541 710 aaKnown RBP19.19■□□□□ 0.66
CCDC12-211ENST00000604367 RWDD1Q9H446 243 aaPredicted RBP19.19■□□□□ 0.66
CCDC12-211ENST00000604367 BRPF1P55201 1214 aaPredicted RBP19.18■□□□□ 0.66
CCDC12-211ENST00000604367 MIS18AQ9NYP9 233 aa19.18■□□□□ 0.66
CCDC12-211ENST00000604367 KIF24Q5T7B8 1368 aa19.17■□□□□ 0.66
CCDC12-211ENST00000604367 CHL1O00533 1208 aa19.17■□□□□ 0.66
CCDC12-211ENST00000604367 USHBP1Q8N6Y0 703 aa19.17■□□□□ 0.66
CCDC12-211ENST00000604367 USP54Q70EL1 1684 aa19.16■□□□□ 0.66
CCDC12-211ENST00000604367 FAM161AQ3B820 660 aa19.16■□□□□ 0.66
CCDC12-211ENST00000604367 NWD1Q149M9 1564 aa19.16■□□□□ 0.66
CCDC12-211ENST00000604367 GAS2L2Q8NHY3 880 aa19.15■□□□□ 0.66
CCDC12-211ENST00000604367 LTN1O94822 1766 aa19.15■□□□□ 0.66
CCDC12-211ENST00000604367 HSPA2P54652 639 aa19.14■□□□□ 0.66
CCDC12-211ENST00000604367 C8orf34Q49A92 452 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms