RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
USHBP1-207ENST00000597928 BCL11BQ9C0K0 894 aaPredicted RBP15.28■□□□□ 0.04
USHBP1-207ENST00000597928 GAS2L2Q8NHY3 880 aa15.27■□□□□ 0.04
USHBP1-207ENST00000597928 HDGFP51858 240 aaKnown RBP15.27■□□□□ 0.03
USHBP1-207ENST00000597928 G2E3Q7L622 706 aa15.27■□□□□ 0.03
USHBP1-207ENST00000597928 NUTM1Q86Y26 1132 aa15.26■□□□□ 0.03
USHBP1-207ENST00000597928 K7ELQ4 463 aaPredicted RBP15.26■□□□□ 0.03
USHBP1-207ENST00000597928 ZBTB7BO15156 539 aaPredicted RBP15.26■□□□□ 0.03
USHBP1-207ENST00000597928 HMMRO75330 724 aa15.26■□□□□ 0.03
USHBP1-207ENST00000597928 CCDC27Q2M243 656 aa15.26■□□□□ 0.03
USHBP1-207ENST00000597928 GDPD2Q9HCC8 539 aa15.26■□□□□ 0.03
USHBP1-207ENST00000597928 ABCC1P33527 1531 aa15.26■□□□□ 0.03
USHBP1-207ENST00000597928 ST18O60284 1047 aa15.25■□□□□ 0.03
USHBP1-207ENST00000597928 HDAC1Q13547 482 aaPredicted RBP15.25■□□□□ 0.03
USHBP1-207ENST00000597928 SMC5Q8IY18 1101 aa15.25■□□□□ 0.03
USHBP1-207ENST00000597928 ABTB2Q8N961 1025 aa15.25■□□□□ 0.03
USHBP1-207ENST00000597928 GCC1Q96CN9 775 aa15.25■□□□□ 0.03
USHBP1-207ENST00000597928 GRPEL1Q9HAV7 217 aa15.25■□□□□ 0.03
USHBP1-207ENST00000597928 RRAGDQ9NQL2 400 aaPredicted RBP15.25■□□□□ 0.03
USHBP1-207ENST00000597928 NINLQ9Y2I6 1382 aa15.25■□□□□ 0.03
USHBP1-207ENST00000597928 NPC1L1Q9UHC9 1359 aa15.25■□□□□ 0.03
USHBP1-207ENST00000597928 YEATS2Q9ULM3 1422 aa15.25■□□□□ 0.03
USHBP1-207ENST00000597928 EID1Q9Y6B2 187 aa15.25■□□□□ 0.03
USHBP1-207ENST00000597928 RBM27Q9P2N5 1060 aaKnown RBP15.24■□□□□ 0.03
USHBP1-207ENST00000597928 ZCCHC11Q5TAX3 1644 aaKnown RBP15.24■□□□□ 0.03
USHBP1-207ENST00000597928 SURF6O75683 361 aaKnown RBP15.24■□□□□ 0.03
USHBP1-207ENST00000597928 EIF4A2Q14240 407 aaKnown RBP15.24■□□□□ 0.03
USHBP1-207ENST00000597928 INTS3Q68E01 1043 aaKnown RBP15.24■□□□□ 0.03
USHBP1-207ENST00000597928 MSNP26038 577 aaKnown RBP15.23■□□□□ 0.03
USHBP1-207ENST00000597928 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
USHBP1-207ENST00000597928 POLR1AO95602 1720 aaPredicted RBP15.23■□□□□ 0.03
USHBP1-207ENST00000597928 ZNF518AQ6AHZ1 1483 aa15.23■□□□□ 0.03
USHBP1-207ENST00000597928 ZGPATQ8N5A5 531 aaKnown RBP15.23■□□□□ 0.03
USHBP1-207ENST00000597928 ACEP12821 1306 aa15.23■□□□□ 0.03
USHBP1-207ENST00000597928 E9PCH4 1651 aa15.22■□□□□ 0.03
USHBP1-207ENST00000597928 AAMPQ13685 434 aa15.22■□□□□ 0.03
USHBP1-207ENST00000597928 SYNMO15061 1565 aa15.22■□□□□ 0.03
USHBP1-207ENST00000597928 CT47B1P0C2W7 299 aaPredicted RBP15.22■□□□□ 0.03
USHBP1-207ENST00000597928 IFT57Q9NWB7 429 aa15.22■□□□□ 0.03
USHBP1-207ENST00000597928 IQGAP3Q86VI3 1631 aa15.22■□□□□ 0.03
USHBP1-207ENST00000597928 TRPM2O94759 1503 aa15.22■□□□□ 0.03
USHBP1-207ENST00000597928 SDSP20132 328 aa15.21■□□□□ 0.03
USHBP1-207ENST00000597928 FOSBP53539 338 aa15.21■□□□□ 0.03
USHBP1-207ENST00000597928 PKP1Q13835 747 aa15.21■□□□□ 0.03
USHBP1-207ENST00000597928 ALDH1L2Q3SY69 923 aa15.21■□□□□ 0.03
USHBP1-207ENST00000597928 KDM5AP29375 1690 aaKnown RBP15.21■□□□□ 0.02
USHBP1-207ENST00000597928 SIRT2Q8IXJ6 389 aa15.2■□□□□ 0.02
USHBP1-207ENST00000597928 ZFYVE16Q7Z3T8 1539 aa15.2■□□□□ 0.02
USHBP1-207ENST00000597928 MCCP23508 829 aa15.2■□□□□ 0.02
USHBP1-207ENST00000597928 NASPP49321 788 aaPredicted RBP15.2■□□□□ 0.02
USHBP1-207ENST00000597928 KIAA1211Q6ZU35 1233 aa15.2■□□□□ 0.02
USHBP1-207ENST00000597928 MRE11P49959 708 aa15.2■□□□□ 0.02
USHBP1-207ENST00000597928 JARID2Q92833 1246 aaPredicted RBP15.2■□□□□ 0.02
USHBP1-207ENST00000597928 MADDQ8WXG6 1647 aa15.19■□□□□ 0.02
USHBP1-207ENST00000597928 IL13P35225 146 aa15.19■□□□□ 0.02
USHBP1-207ENST00000597928 BMP2KLQ5H9B9 411 aa15.19■□□□□ 0.02
USHBP1-207ENST00000597928 YTHDC2Q9H6S0 1430 aaKnown RBP15.19■□□□□ 0.02
USHBP1-207ENST00000597928 TEFQ10587 303 aa15.19■□□□□ 0.02
USHBP1-207ENST00000597928 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
USHBP1-207ENST00000597928 SIL1Q9H173 461 aa15.19■□□□□ 0.02
USHBP1-207ENST00000597928 PPIP5K1Q6PFW1 1433 aa15.18■□□□□ 0.02
USHBP1-207ENST00000597928 PLEKHM2Q8IWE5 1019 aa15.18■□□□□ 0.02
USHBP1-207ENST00000597928 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
USHBP1-207ENST00000597928 LRRFIP2Q9Y608 721 aaKnown RBP15.18■□□□□ 0.02
USHBP1-207ENST00000597928 UNC13BO14795 1591 aa15.18■□□□□ 0.02
USHBP1-207ENST00000597928 REC8O95072 547 aa15.18■□□□□ 0.02
USHBP1-207ENST00000597928 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
USHBP1-207ENST00000597928 UBTFL1P0CB47 393 aaPredicted RBP15.18■□□□□ 0.02
USHBP1-207ENST00000597928 GSPT1P15170 499 aaKnown RBP15.17■□□□□ 0.02
USHBP1-207ENST00000597928 FGD1P98174 961 aa15.17■□□□□ 0.02
USHBP1-207ENST00000597928 HAP1P54257 671 aaPredicted RBP15.17■□□□□ 0.02
USHBP1-207ENST00000597928 FAM43AQ8N2R8 423 aa15.17■□□□□ 0.02
USHBP1-207ENST00000597928 PPFIA3O75145 1194 aa15.16■□□□□ 0.02
USHBP1-207ENST00000597928 GNAI2P04899 355 aa15.16■□□□□ 0.02
USHBP1-207ENST00000597928 CSB-PGBD3P0DP91 1061 aa15.16■□□□□ 0.02
USHBP1-207ENST00000597928 C9orf78Q9NZ63 289 aaPredicted RBP15.16■□□□□ 0.02
USHBP1-207ENST00000597928 AMOTL2Q9Y2J4 779 aa15.16■□□□□ 0.02
USHBP1-207ENST00000597928 RBM10P98175 930 aaKnown RBP15.16■□□□□ 0.02
USHBP1-207ENST00000597928 PSME1Q06323 249 aa15.16■□□□□ 0.02
USHBP1-207ENST00000597928 PIP4K2AP48426 406 aaPredicted RBP15.15■□□□□ 0.02
USHBP1-207ENST00000597928 ESCO1Q5FWF5 840 aa15.15■□□□□ 0.02
USHBP1-207ENST00000597928 GAS2L3Q86XJ1 694 aa15.15■□□□□ 0.02
USHBP1-207ENST00000597928 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
USHBP1-207ENST00000597928 ABCC11Q96J66 1382 aa15.15■□□□□ 0.02
USHBP1-207ENST00000597928 SYCE3A1L190 88 aa15.15■□□□□ 0.02
USHBP1-207ENST00000597928 MPRIPQ6WCQ1 1025 aa15.15■□□□□ 0.02
USHBP1-207ENST00000597928 SRGAP3O43295 1099 aa15.14■□□□□ 0.01
USHBP1-207ENST00000597928 TTC22Q5TAA0 569 aa15.14■□□□□ 0.01
USHBP1-207ENST00000597928 VPS37CA5D8V6 355 aaPredicted RBP15.14■□□□□ 0.01
USHBP1-207ENST00000597928 BAG4O95429 457 aaKnown RBP15.14■□□□□ 0.01
USHBP1-207ENST00000597928 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
USHBP1-207ENST00000597928 ERC2O15083 957 aa15.13■□□□□ 0.01
USHBP1-207ENST00000597928 CPA1P15085 419 aa15.13■□□□□ 0.01
USHBP1-207ENST00000597928 RABEP1Q15276 862 aa15.13■□□□□ 0.01
USHBP1-207ENST00000597928 CEP85Q6P2H3 762 aa15.13■□□□□ 0.01
USHBP1-207ENST00000597928 PHF23Q9BUL5 403 aaPredicted RBP15.13■□□□□ 0.01
USHBP1-207ENST00000597928 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
USHBP1-207ENST00000597928 PHAXQ9H814 394 aaKnown RBP15.13■□□□□ 0.01
USHBP1-207ENST00000597928 TTC21BQ7Z4L5 1316 aa15.13■□□□□ 0.01
USHBP1-207ENST00000597928 NSD2O96028 1365 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms