RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 CDK12Q9NYV4 1490 aaPredicted RBP11.03□□□□□ -0.64
SIN3B-208ENST00000596638 PRR36Q9H6K5 1346 aa11.03□□□□□ -0.64
SIN3B-208ENST00000596638 APAF1O14727 1248 aa11.02□□□□□ -0.65
SIN3B-208ENST00000596638 POGKQ9P215 609 aa11.02□□□□□ -0.65
SIN3B-208ENST00000596638 CDC42BPGQ6DT37 1551 aa11.02□□□□□ -0.65
SIN3B-208ENST00000596638 ATRNO75882 1429 aa11.01□□□□□ -0.65
SIN3B-208ENST00000596638 GJD4Q96KN9 370 aaPredicted RBP11.01□□□□□ -0.65
SIN3B-208ENST00000596638 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
SIN3B-208ENST00000596638 FAM83GA6ND36 823 aa11□□□□□ -0.65
SIN3B-208ENST00000596638 PSME1Q06323 249 aa11□□□□□ -0.65
SIN3B-208ENST00000596638 CCDC27Q2M243 656 aa11□□□□□ -0.65
SIN3B-208ENST00000596638 WDR63Q8IWG1 891 aa11□□□□□ -0.65
SIN3B-208ENST00000596638 CENPJQ9HC77 1338 aaPredicted RBP11□□□□□ -0.65
SIN3B-208ENST00000596638 ADGRB1O14514 1584 aa10.99□□□□□ -0.65
SIN3B-208ENST00000596638 WASLO00401 505 aaPredicted RBP10.99□□□□□ -0.65
SIN3B-208ENST00000596638 BECN1Q14457 450 aa10.99□□□□□ -0.65
SIN3B-208ENST00000596638 SKAP1Q86WV1 359 aa10.99□□□□□ -0.65
SIN3B-208ENST00000596638 UNC5CLQ8IV45 518 aa10.99□□□□□ -0.65
SIN3B-208ENST00000596638 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
SIN3B-208ENST00000596638 CLUAP1Q96AJ1 413 aa10.99□□□□□ -0.65
SIN3B-208ENST00000596638 USP19O94966 1318 aa10.99□□□□□ -0.65
SIN3B-208ENST00000596638 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
SIN3B-208ENST00000596638 RGPD8O14715 1765 aaPredicted RBP10.98□□□□□ -0.65
SIN3B-208ENST00000596638 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
SIN3B-208ENST00000596638 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
SIN3B-208ENST00000596638 CARD14Q9BXL6 1004 aa10.98□□□□□ -0.65
SIN3B-208ENST00000596638 SPINK5Q9NQ38 1064 aaPredicted RBP10.98□□□□□ -0.65
SIN3B-208ENST00000596638 FMN2Q9NZ56 1722 aa10.98□□□□□ -0.65
SIN3B-208ENST00000596638 BCAR3O75815 825 aa10.97□□□□□ -0.65
SIN3B-208ENST00000596638 IGHDP01880 384 aa10.97□□□□□ -0.65
SIN3B-208ENST00000596638 CT47B1P0C2W7 299 aaPredicted RBP10.97□□□□□ -0.65
SIN3B-208ENST00000596638 WWC1Q8IX03 1113 aa10.97□□□□□ -0.65
SIN3B-208ENST00000596638 FRAT1Q92837 279 aaPredicted RBP10.97□□□□□ -0.65
SIN3B-208ENST00000596638 SLIT2O94813 1529 aa10.97□□□□□ -0.65
SIN3B-208ENST00000596638 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
SIN3B-208ENST00000596638 SBNO1A3KN83 1393 aa10.96□□□□□ -0.65
SIN3B-208ENST00000596638 NSD2O96028 1365 aa10.96□□□□□ -0.65
SIN3B-208ENST00000596638 ONECUT3O60422 494 aaPredicted RBP10.96□□□□□ -0.65
SIN3B-208ENST00000596638 RGS3P49796 1198 aa10.96□□□□□ -0.65
SIN3B-208ENST00000596638 CCDC146Q8IYE0 955 aa10.96□□□□□ -0.65
SIN3B-208ENST00000596638 NUDT16Q96DE0 195 aaKnown RBP10.95□□□□□ -0.66
SIN3B-208ENST00000596638 CDK19Q9BWU1 502 aa10.95□□□□□ -0.66
SIN3B-208ENST00000596638 DLC1Q96QB1 1528 aa10.94□□□□□ -0.66
SIN3B-208ENST00000596638 SLC4A3P48751 1232 aa10.94□□□□□ -0.66
SIN3B-208ENST00000596638 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
SIN3B-208ENST00000596638 VPS72Q15906 364 aa10.94□□□□□ -0.66
SIN3B-208ENST00000596638 SEPT12Q8IYM1 358 aa10.94□□□□□ -0.66
SIN3B-208ENST00000596638 TNS3Q68CZ2 1445 aa10.93□□□□□ -0.66
SIN3B-208ENST00000596638 FRAT2O75474 233 aaPredicted RBP10.93□□□□□ -0.66
SIN3B-208ENST00000596638 FAM43AQ8N2R8 423 aa10.93□□□□□ -0.66
SIN3B-208ENST00000596638 RWDD1Q9H446 243 aaPredicted RBP10.93□□□□□ -0.66
SIN3B-208ENST00000596638 ADGRB2O60241 1585 aa10.92□□□□□ -0.66
SIN3B-208ENST00000596638 GLI3P10071 1580 aa10.92□□□□□ -0.66
SIN3B-208ENST00000596638 MORC1Q86VD1 984 aa10.92□□□□□ -0.66
SIN3B-208ENST00000596638 NGDNQ8NEJ9 315 aaKnown RBP10.92□□□□□ -0.66
SIN3B-208ENST00000596638 CFAP53Q96M91 514 aa10.92□□□□□ -0.66
SIN3B-208ENST00000596638 UPF2Q9HAU5 1272 aaKnown RBP10.92□□□□□ -0.66
SIN3B-208ENST00000596638 ANKARQ7Z5J8 1434 aa10.92□□□□□ -0.66
SIN3B-208ENST00000596638 NSD3Q9BZ95 1437 aa10.92□□□□□ -0.66
SIN3B-208ENST00000596638 ATAD2Q6PL18 1390 aa10.91□□□□□ -0.66
SIN3B-208ENST00000596638 CANXP27824 592 aaKnown RBP10.91□□□□□ -0.66
SIN3B-208ENST00000596638 HAP1P54257 671 aaPredicted RBP10.91□□□□□ -0.66
SIN3B-208ENST00000596638 L1TD1Q5T7N2 865 aaKnown RBP10.91□□□□□ -0.66
SIN3B-208ENST00000596638 NUTM2GQ5VZR2 741 aa10.91□□□□□ -0.66
SIN3B-208ENST00000596638 DEFB132Q7Z7B7 95 aa10.91□□□□□ -0.66
SIN3B-208ENST00000596638 TBC1D32Q96NH3 1257 aa10.91□□□□□ -0.66
SIN3B-208ENST00000596638 MYH16Q9H6N6 1097 aa10.91□□□□□ -0.66
SIN3B-208ENST00000596638 ANTXR1Q9H6X2 564 aa10.91□□□□□ -0.66
SIN3B-208ENST00000596638 BTG4Q9NY30 223 aa10.91□□□□□ -0.66
SIN3B-208ENST00000596638 QRICH2Q9H0J4 1663 aa10.91□□□□□ -0.66
SIN3B-208ENST00000596638 TCP11L2Q8N4U5 519 aa10.9□□□□□ -0.66
SIN3B-208ENST00000596638 PANK1Q8TE04 598 aa10.9□□□□□ -0.66
SIN3B-208ENST00000596638 BRPF3Q9ULD4 1205 aa10.9□□□□□ -0.66
SIN3B-208ENST00000596638 COG6Q9Y2V7 657 aa10.9□□□□□ -0.66
SIN3B-208ENST00000596638 ACEP12821 1306 aa10.89□□□□□ -0.67
SIN3B-208ENST00000596638 PLEKHG3A1L390 1219 aa10.89□□□□□ -0.67
SIN3B-208ENST00000596638 CHRNA2Q15822 529 aa10.89□□□□□ -0.67
SIN3B-208ENST00000596638 FAM182BQ5T319 152 aa10.89□□□□□ -0.67
SIN3B-208ENST00000596638 CCDC9Q9Y3X0 531 aaKnown RBP10.89□□□□□ -0.67
SIN3B-208ENST00000596638 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
SIN3B-208ENST00000596638 MARF1Q9Y4F3 1742 aaKnown RBP10.89□□□□□ -0.67
SIN3B-208ENST00000596638 ARHGEF10O15013 1369 aa10.89□□□□□ -0.67
SIN3B-208ENST00000596638 KIF1AQ12756 1690 aa10.89□□□□□ -0.67
SIN3B-208ENST00000596638 IL16Q14005 1332 aa10.88□□□□□ -0.67
SIN3B-208ENST00000596638 ZC3H6P61129 1189 aaKnown RBP10.88□□□□□ -0.67
SIN3B-208ENST00000596638 FAM98CQ17RN3 349 aaKnown RBP10.88□□□□□ -0.67
SIN3B-208ENST00000596638 CABP2Q9NPB3 220 aa10.88□□□□□ -0.67
SIN3B-208ENST00000596638 PDZRN3Q9UPQ7 1066 aa10.88□□□□□ -0.67
SIN3B-208ENST00000596638 ANKRD36BQ8N2N9 1353 aa10.88□□□□□ -0.67
SIN3B-208ENST00000596638 SEC24BO95487 1268 aa10.87□□□□□ -0.67
SIN3B-208ENST00000596638 HDAC1Q13547 482 aaPredicted RBP10.87□□□□□ -0.67
SIN3B-208ENST00000596638 CCDC125Q86Z20 511 aa10.87□□□□□ -0.67
SIN3B-208ENST00000596638 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
SIN3B-208ENST00000596638 PCDHB15Q9Y5E8 787 aa10.87□□□□□ -0.67
SIN3B-208ENST00000596638 TULP4Q9NRJ4 1543 aa10.87□□□□□ -0.67
SIN3B-208ENST00000596638 TRPM3Q9HCF6 1732 aaPredicted RBP10.87□□□□□ -0.67
SIN3B-208ENST00000596638 MVPQ14764 893 aaKnown RBP10.86□□□□□ -0.67
SIN3B-208ENST00000596638 ZKSCAN2Q63HK3 967 aa10.86□□□□□ -0.67
SIN3B-208ENST00000596638 KRT27Q7Z3Y8 459 aa10.86□□□□□ -0.67
SIN3B-208ENST00000596638 ATP7BP35670 1465 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms