RNA–Protein interactions for RNA: ENST00000592224.5

SAFB-211, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 3,014 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-211ENST00000592224 ARID3AQ99856 593 aa17.42■□□□□ 0.38
SAFB-211ENST00000592224 DDX49Q9Y6V7 483 aaKnown RBP17.42■□□□□ 0.38
SAFB-211ENST00000592224 PLEKHG5O94827 1062 aa17.42■□□□□ 0.38
SAFB-211ENST00000592224 RBM10P98175 930 aaKnown RBP17.42■□□□□ 0.38
SAFB-211ENST00000592224 SBNO2Q9Y2G9 1366 aa17.42■□□□□ 0.38
SAFB-211ENST00000592224 PREX1Q8TCU6 1659 aa17.41■□□□□ 0.38
SAFB-211ENST00000592224 KIAA1210Q9ULL0 1709 aa17.41■□□□□ 0.38
SAFB-211ENST00000592224 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
SAFB-211ENST00000592224 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
SAFB-211ENST00000592224 RRP9O43818 475 aaKnown RBP17.41■□□□□ 0.38
SAFB-211ENST00000592224 KIAA1211Q6ZU35 1233 aa17.41■□□□□ 0.38
SAFB-211ENST00000592224 SNX21Q969T3 373 aa17.41■□□□□ 0.38
SAFB-211ENST00000592224 ZBTB7CA1YPR0 619 aa17.4■□□□□ 0.38
SAFB-211ENST00000592224 NASPP49321 788 aaPredicted RBP17.4■□□□□ 0.38
SAFB-211ENST00000592224 PKP1Q13835 747 aa17.4■□□□□ 0.38
SAFB-211ENST00000592224 APBB1O00213 710 aa17.4■□□□□ 0.38
SAFB-211ENST00000592224 TMEM131LA2VDJ0 1609 aa17.4■□□□□ 0.38
SAFB-211ENST00000592224 K7ELQ4 463 aaPredicted RBP17.39■□□□□ 0.38
SAFB-211ENST00000592224 TSPYL6Q8N831 410 aa17.39■□□□□ 0.38
SAFB-211ENST00000592224 TERF2IPQ9NYB0 399 aa17.39■□□□□ 0.38
SAFB-211ENST00000592224 A2ML1A8K2U0 1454 aa17.39■□□□□ 0.37
SAFB-211ENST00000592224 FOXD4L5Q5VV16 416 aaPredicted RBP17.39■□□□□ 0.37
SAFB-211ENST00000592224 MCTP1Q6DN14 999 aa17.39■□□□□ 0.37
SAFB-211ENST00000592224 FOXD4L4Q8WXT5 416 aaPredicted RBP17.39■□□□□ 0.37
SAFB-211ENST00000592224 NME9Q86XW9 330 aa17.39■□□□□ 0.37
SAFB-211ENST00000592224 HDGFL2Q7Z4V5 671 aaPredicted RBP17.38■□□□□ 0.37
SAFB-211ENST00000592224 ANKRD36BQ8N2N9 1353 aa17.38■□□□□ 0.37
SAFB-211ENST00000592224 HMOX1P09601 288 aa17.38■□□□□ 0.37
SAFB-211ENST00000592224 CAVIN1Q6NZI2 390 aaKnown RBP17.37■□□□□ 0.37
SAFB-211ENST00000592224 SETBP1Q9Y6X0 1596 aa17.37■□□□□ 0.37
SAFB-211ENST00000592224 SIRT2Q8IXJ6 389 aa17.37■□□□□ 0.37
SAFB-211ENST00000592224 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
SAFB-211ENST00000592224 IPO8O15397 1037 aaKnown RBP17.37■□□□□ 0.37
SAFB-211ENST00000592224 BMP2KLQ5H9B9 411 aa17.37■□□□□ 0.37
SAFB-211ENST00000592224 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
SAFB-211ENST00000592224 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
SAFB-211ENST00000592224 BAG4O95429 457 aaKnown RBP17.36■□□□□ 0.37
SAFB-211ENST00000592224 PTPRMP28827 1452 aa17.36■□□□□ 0.37
SAFB-211ENST00000592224 RRS1Q15050 365 aaKnown RBP17.36■□□□□ 0.37
SAFB-211ENST00000592224 RBM27Q9P2N5 1060 aaKnown RBP17.35■□□□□ 0.37
SAFB-211ENST00000592224 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
SAFB-211ENST00000592224 EMILIN1Q9Y6C2 1016 aa17.35■□□□□ 0.37
SAFB-211ENST00000592224 KIF16BQ96L93 1317 aa17.35■□□□□ 0.37
SAFB-211ENST00000592224 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
SAFB-211ENST00000592224 TNRQ92752 1358 aa17.34■□□□□ 0.37
SAFB-211ENST00000592224 CIZ1Q9ULV3 898 aaPredicted RBP17.34■□□□□ 0.37
SAFB-211ENST00000592224 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
SAFB-211ENST00000592224 PRKAR2BP31323 418 aa17.34■□□□□ 0.37
SAFB-211ENST00000592224 SKOR2Q2VWA4 1001 aaPredicted RBP17.34■□□□□ 0.37
SAFB-211ENST00000592224 NUDT16Q96DE0 195 aaKnown RBP17.34■□□□□ 0.37
SAFB-211ENST00000592224 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.37
SAFB-211ENST00000592224 WASLO00401 505 aaPredicted RBP17.33■□□□□ 0.36
SAFB-211ENST00000592224 OTUD7AQ8TE49 926 aaPredicted RBP17.33■□□□□ 0.36
SAFB-211ENST00000592224 DIAPH1O60610 1272 aaKnown RBP17.32■□□□□ 0.36
SAFB-211ENST00000592224 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
SAFB-211ENST00000592224 R3HCC1Q9Y3T6 440 aaKnown RBP17.32■□□□□ 0.36
SAFB-211ENST00000592224 ARHGEF28Q8N1W1 1705 aaKnown RBP17.32■□□□□ 0.36
SAFB-211ENST00000592224 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
SAFB-211ENST00000592224 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
SAFB-211ENST00000592224 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
SAFB-211ENST00000592224 ZGPATQ8N5A5 531 aaKnown RBP17.31■□□□□ 0.36
SAFB-211ENST00000592224 MSNP26038 577 aaKnown RBP17.31■□□□□ 0.36
SAFB-211ENST00000592224 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
SAFB-211ENST00000592224 ANP32BQ92688 251 aaKnown RBP17.31■□□□□ 0.36
SAFB-211ENST00000592224 ZFYVE9O95405 1425 aa17.31■□□□□ 0.36
SAFB-211ENST00000592224 ZSCAN30Q86W11 494 aa17.3■□□□□ 0.36
SAFB-211ENST00000592224 RBSNQ9H1K0 784 aa17.3■□□□□ 0.36
SAFB-211ENST00000592224 ISY1Q9ULR0 285 aaKnown RBP17.3■□□□□ 0.36
SAFB-211ENST00000592224 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
SAFB-211ENST00000592224 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
SAFB-211ENST00000592224 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
SAFB-211ENST00000592224 MPNDQ8N594 471 aa17.3■□□□□ 0.36
SAFB-211ENST00000592224 FAM13BQ9NYF5 915 aa17.3■□□□□ 0.36
SAFB-211ENST00000592224 PRPF40AO75400 957 aaKnown RBP17.29■□□□□ 0.36
SAFB-211ENST00000592224 SMARCA5O60264 1052 aaPredicted RBP17.29■□□□□ 0.36
SAFB-211ENST00000592224 NUTM2GQ5VZR2 741 aa17.29■□□□□ 0.36
SAFB-211ENST00000592224 MYO3AQ8NEV4 1616 aa17.29■□□□□ 0.36
SAFB-211ENST00000592224 KLHL40Q2TBA0 621 aa17.29■□□□□ 0.36
SAFB-211ENST00000592224 ZSCAN23Q3MJ62 389 aa17.29■□□□□ 0.36
SAFB-211ENST00000592224 VAMP4O75379 141 aa17.28■□□□□ 0.36
SAFB-211ENST00000592224 PRIM1P49642 420 aaKnown RBP17.28■□□□□ 0.36
SAFB-211ENST00000592224 FOXD4L6Q3SYB3 417 aaPredicted RBP17.28■□□□□ 0.36
SAFB-211ENST00000592224 FOXD4L3Q6VB84 417 aaPredicted RBP17.28■□□□□ 0.36
SAFB-211ENST00000592224 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.28■□□□□ 0.36
SAFB-211ENST00000592224 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
SAFB-211ENST00000592224 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
SAFB-211ENST00000592224 ZC3H13Q5T200 1668 aaKnown RBP17.27■□□□□ 0.36
SAFB-211ENST00000592224 FAM83GA6ND36 823 aa17.27■□□□□ 0.36
SAFB-211ENST00000592224 CDC45O75419 566 aa17.27■□□□□ 0.36
SAFB-211ENST00000592224 MRPL50Q8N5N7 158 aaKnown RBP17.27■□□□□ 0.36
SAFB-211ENST00000592224 PPP1R9BQ96SB3 815 aa17.27■□□□□ 0.36
SAFB-211ENST00000592224 POLKQ9UBT6 870 aa17.27■□□□□ 0.36
SAFB-211ENST00000592224 PRR36Q9H6K5 1346 aa17.27■□□□□ 0.36
SAFB-211ENST00000592224 RNF214Q8ND24 703 aa17.27■□□□□ 0.35
SAFB-211ENST00000592224 NSFL1CQ9UNZ2 370 aaKnown RBP17.27■□□□□ 0.35
SAFB-211ENST00000592224 ROBO2Q9HCK4 1378 aa17.27■□□□□ 0.35
SAFB-211ENST00000592224 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
SAFB-211ENST00000592224 CD163L1Q9NR16 1453 aa17.26■□□□□ 0.35
SAFB-211ENST00000592224 NOL8Q76FK4 1167 aaKnown RBP17.26■□□□□ 0.35
SAFB-211ENST00000592224 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms