RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 IRX6P78412 446 aaPredicted RBP13.09□□□□□ -0.31
PTPN2-210ENST00000591115 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
PTPN2-210ENST00000591115 COL22A1Q8NFW1 1626 aaPredicted RBP13.08□□□□□ -0.32
PTPN2-210ENST00000591115 SLIT3O75094 1523 aa13.08□□□□□ -0.32
PTPN2-210ENST00000591115 LMOD2Q6P5Q4 547 aa13.08□□□□□ -0.32
PTPN2-210ENST00000591115 TRMT2AQ8IZ69 625 aaKnown RBP13.08□□□□□ -0.32
PTPN2-210ENST00000591115 ABTB2Q8N961 1025 aa13.08□□□□□ -0.32
PTPN2-210ENST00000591115 MAP2P11137 1827 aaKnown RBP13.08□□□□□ -0.32
PTPN2-210ENST00000591115 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
PTPN2-210ENST00000591115 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
PTPN2-210ENST00000591115 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
PTPN2-210ENST00000591115 SLFN5Q08AF3 891 aa13.07□□□□□ -0.32
PTPN2-210ENST00000591115 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
PTPN2-210ENST00000591115 SPATA31A3Q5VYP0 1347 aa13.07□□□□□ -0.32
PTPN2-210ENST00000591115 NFAT5O94916 1531 aa13.07□□□□□ -0.32
PTPN2-210ENST00000591115 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
PTPN2-210ENST00000591115 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
PTPN2-210ENST00000591115 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
PTPN2-210ENST00000591115 E9PSI1 815 aa13.06□□□□□ -0.32
PTPN2-210ENST00000591115 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
PTPN2-210ENST00000591115 SOX12O15370 315 aa13.05□□□□□ -0.32
PTPN2-210ENST00000591115 NLRP6P59044 892 aa13.05□□□□□ -0.32
PTPN2-210ENST00000591115 COG3Q96JB2 828 aa13.05□□□□□ -0.32
PTPN2-210ENST00000591115 PNNQ9H307 717 aaKnown RBP13.05□□□□□ -0.32
PTPN2-210ENST00000591115 U2AF1L5P0DN76 240 aaPredicted RBP13.04□□□□□ -0.32
PTPN2-210ENST00000591115 U2AF1Q01081 240 aaKnown RBP eCLIP13.04□□□□□ -0.32
PTPN2-210ENST00000591115 DIAPH1O60610 1272 aaKnown RBP13.03□□□□□ -0.32
PTPN2-210ENST00000591115 FBLN1P23142 703 aa13.03□□□□□ -0.32
PTPN2-210ENST00000591115 WDR63Q8IWG1 891 aa13.03□□□□□ -0.32
PTPN2-210ENST00000591115 WWC1Q8IX03 1113 aa13.03□□□□□ -0.32
PTPN2-210ENST00000591115 TCP11L2Q8N4U5 519 aa13.03□□□□□ -0.32
PTPN2-210ENST00000591115 USP19O94966 1318 aa13.03□□□□□ -0.32
PTPN2-210ENST00000591115 POLKQ9UBT6 870 aa13.02□□□□□ -0.32
PTPN2-210ENST00000591115 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.32
PTPN2-210ENST00000591115 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
PTPN2-210ENST00000591115 RGPD5Q99666 1765 aa13.01□□□□□ -0.33
PTPN2-210ENST00000591115 HSPA1LP34931 641 aa13.01□□□□□ -0.33
PTPN2-210ENST00000591115 LRRC59Q96AG4 307 aaKnown RBP13□□□□□ -0.33
PTPN2-210ENST00000591115 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
PTPN2-210ENST00000591115 FCHSD2O94868 740 aa12.99□□□□□ -0.33
PTPN2-210ENST00000591115 RRS1Q15050 365 aaKnown RBP12.99□□□□□ -0.33
PTPN2-210ENST00000591115 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
PTPN2-210ENST00000591115 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.99□□□□□ -0.33
PTPN2-210ENST00000591115 EMILIN1Q9Y6C2 1016 aa12.99□□□□□ -0.33
PTPN2-210ENST00000591115 COL18A1P39060 1754 aa12.99□□□□□ -0.33
PTPN2-210ENST00000591115 MAPK8IP3Q9UPT6 1336 aa12.98□□□□□ -0.33
PTPN2-210ENST00000591115 PLCH1Q4KWH8 1693 aa12.98□□□□□ -0.33
PTPN2-210ENST00000591115 MAP3K19Q56UN5 1328 aa12.97□□□□□ -0.33
PTPN2-210ENST00000591115 GCP02774 474 aa12.97□□□□□ -0.33
PTPN2-210ENST00000591115 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
PTPN2-210ENST00000591115 LMO7Q8WWI1 1683 aa12.97□□□□□ -0.33
PTPN2-210ENST00000591115 JCADQ9P266 1359 aa12.97□□□□□ -0.33
PTPN2-210ENST00000591115 LRP6O75581 1613 aa12.96□□□□□ -0.33
PTPN2-210ENST00000591115 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.34
PTPN2-210ENST00000591115 IL16Q14005 1332 aa12.96□□□□□ -0.34
PTPN2-210ENST00000591115 ZBTB7CA1YPR0 619 aa12.95□□□□□ -0.34
PTPN2-210ENST00000591115 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
PTPN2-210ENST00000591115 IL13P35225 146 aa12.95□□□□□ -0.34
PTPN2-210ENST00000591115 TMPOP42166 694 aaKnown RBP12.95□□□□□ -0.34
PTPN2-210ENST00000591115 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
PTPN2-210ENST00000591115 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
PTPN2-210ENST00000591115 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
PTPN2-210ENST00000591115 KIAA0232Q92628 1395 aa12.95□□□□□ -0.34
PTPN2-210ENST00000591115 NEFMP07197 916 aa12.95□□□□□ -0.34
PTPN2-210ENST00000591115 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
PTPN2-210ENST00000591115 CCDC136Q96JN2 1154 aa12.95□□□□□ -0.34
PTPN2-210ENST00000591115 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
PTPN2-210ENST00000591115 MYH16Q9H6N6 1097 aa12.95□□□□□ -0.34
PTPN2-210ENST00000591115 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
PTPN2-210ENST00000591115 COL14A1Q05707 1796 aaKnown RBP12.95□□□□□ -0.34
PTPN2-210ENST00000591115 ABCC6O95255 1503 aa12.94□□□□□ -0.34
PTPN2-210ENST00000591115 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
PTPN2-210ENST00000591115 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
PTPN2-210ENST00000591115 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
PTPN2-210ENST00000591115 CPDO75976 1380 aa12.94□□□□□ -0.34
PTPN2-210ENST00000591115 FLT4P35916 1363 aa12.94□□□□□ -0.34
PTPN2-210ENST00000591115 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
PTPN2-210ENST00000591115 FBXO41Q8TF61 875 aa12.93□□□□□ -0.34
PTPN2-210ENST00000591115 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
PTPN2-210ENST00000591115 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
PTPN2-210ENST00000591115 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
PTPN2-210ENST00000591115 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
PTPN2-210ENST00000591115 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
PTPN2-210ENST00000591115 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
PTPN2-210ENST00000591115 EXOC6Q8TAG9 804 aa12.92□□□□□ -0.34
PTPN2-210ENST00000591115 NRAPQ86VF7 1730 aa12.92□□□□□ -0.34
PTPN2-210ENST00000591115 AMPHP49418 695 aa12.91□□□□□ -0.34
PTPN2-210ENST00000591115 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
PTPN2-210ENST00000591115 FAM208AQ9UK61 1670 aaKnown RBP12.91□□□□□ -0.34
PTPN2-210ENST00000591115 CAMTA1Q9Y6Y1 1673 aa12.91□□□□□ -0.34
PTPN2-210ENST00000591115 HOXC9P31274 260 aa12.91□□□□□ -0.34
PTPN2-210ENST00000591115 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
PTPN2-210ENST00000591115 HSP90AB2PQ58FF8 381 aa12.91□□□□□ -0.34
PTPN2-210ENST00000591115 PRDM11Q9NQV5 511 aa12.91□□□□□ -0.34
PTPN2-210ENST00000591115 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
PTPN2-210ENST00000591115 NWD2Q9ULI1 1742 aa12.9□□□□□ -0.34
PTPN2-210ENST00000591115 PLIN1O60240 522 aa12.9□□□□□ -0.34
PTPN2-210ENST00000591115 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
PTPN2-210ENST00000591115 RIPK4P57078 832 aa12.9□□□□□ -0.34
PTPN2-210ENST00000591115 CALD1Q05682 793 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms