RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 NUTM2GQ5VZR2 741 aa28.89■■■□□ 2.22
RUNDC3A-205ENST00000590834 ABTB2Q8N961 1025 aa28.89■■■□□ 2.22
RUNDC3A-205ENST00000590834 PAK3O75914 559 aaPredicted RBP28.89■■■□□ 2.21
RUNDC3A-205ENST00000590834 RARSP54136 660 aaKnown RBP28.89■■■□□ 2.21
RUNDC3A-205ENST00000590834 FLT4P35916 1363 aa28.88■■■□□ 2.21
RUNDC3A-205ENST00000590834 AEBP1Q8IUX7 1158 aa28.87■■■□□ 2.21
RUNDC3A-205ENST00000590834 HSPA2P54652 639 aa28.86■■■□□ 2.21
RUNDC3A-205ENST00000590834 ANP32EQ9BTT0 268 aa28.86■■■□□ 2.21
RUNDC3A-205ENST00000590834 SULT6B1Q6IMI4 303 aa28.85■■■□□ 2.21
RUNDC3A-205ENST00000590834 ORAI2Q96SN7 254 aa28.84■■■□□ 2.21
RUNDC3A-205ENST00000590834 STRCP1A6NGW2 1772 aa28.84■■■□□ 2.21
RUNDC3A-205ENST00000590834 KDM4FA0A1W2PPD8 638 aa28.84■■■□□ 2.21
RUNDC3A-205ENST00000590834 DLG5Q8TDM6 1919 aa28.83■■■□□ 2.21
RUNDC3A-205ENST00000590834 PSME1Q06323 249 aa28.82■■■□□ 2.2
RUNDC3A-205ENST00000590834 AMPHP49418 695 aa28.82■■■□□ 2.2
RUNDC3A-205ENST00000590834 EXOSC9Q06265 439 aaKnown RBP28.82■■■□□ 2.2
RUNDC3A-205ENST00000590834 C19orf44Q9H6X5 657 aa28.81■■■□□ 2.2
RUNDC3A-205ENST00000590834 CT47B1P0C2W7 299 aaPredicted RBP28.81■■■□□ 2.2
RUNDC3A-205ENST00000590834 ARHGEF10O15013 1369 aa28.79■■■□□ 2.2
RUNDC3A-205ENST00000590834 KIF24Q5T7B8 1368 aa28.79■■■□□ 2.2
RUNDC3A-205ENST00000590834 THUMPD2Q9BTF0 503 aaKnown RBP28.79■■■□□ 2.2
RUNDC3A-205ENST00000590834 C1orf167Q5SNV9 1468 aa28.78■■■□□ 2.2
RUNDC3A-205ENST00000590834 PDE3AQ14432 1141 aa28.78■■■□□ 2.2
RUNDC3A-205ENST00000590834 BCL2L13Q9BXK5 485 aa28.77■■■□□ 2.2
RUNDC3A-205ENST00000590834 TMEM94Q12767 1356 aa28.77■■■□□ 2.2
RUNDC3A-205ENST00000590834 FOXO3O43524 673 aa28.76■■■□□ 2.2
RUNDC3A-205ENST00000590834 HOXC9P31274 260 aa28.76■■■□□ 2.2
RUNDC3A-205ENST00000590834 FRAT1Q92837 279 aaPredicted RBP28.75■■■□□ 2.19
RUNDC3A-205ENST00000590834 LMTK3Q96Q04 1460 aa28.75■■■□□ 2.19
RUNDC3A-205ENST00000590834 CANXP27824 592 aaKnown RBP28.75■■■□□ 2.19
RUNDC3A-205ENST00000590834 LMOD3Q0VAK6 560 aa28.75■■■□□ 2.19
RUNDC3A-205ENST00000590834 CALD1Q05682 793 aaKnown RBP28.74■■■□□ 2.19
RUNDC3A-205ENST00000590834 NFAT5O94916 1531 aa28.74■■■□□ 2.19
RUNDC3A-205ENST00000590834 KDRP35968 1356 aa28.73■■■□□ 2.19
RUNDC3A-205ENST00000590834 IGSF1Q8N6C5 1336 aa28.73■■■□□ 2.19
RUNDC3A-205ENST00000590834 FAM83GA6ND36 823 aa28.73■■■□□ 2.19
RUNDC3A-205ENST00000590834 EYA1Q99502 592 aa28.73■■■□□ 2.19
RUNDC3A-205ENST00000590834 KIF1AQ12756 1690 aa28.72■■■□□ 2.19
RUNDC3A-205ENST00000590834 XPCQ01831 940 aaPredicted RBP28.72■■■□□ 2.19
RUNDC3A-205ENST00000590834 NCOA3Q9Y6Q9 1424 aa28.72■■■□□ 2.19
RUNDC3A-205ENST00000590834 LTN1O94822 1766 aa28.72■■■□□ 2.19
RUNDC3A-205ENST00000590834 PANK1Q8TE04 598 aa28.72■■■□□ 2.19
RUNDC3A-205ENST00000590834 LAS1LQ9Y4W2 734 aaKnown RBP28.72■■■□□ 2.19
RUNDC3A-205ENST00000590834 ZNF853P0CG23 659 aa28.71■■■□□ 2.19
RUNDC3A-205ENST00000590834 IFT57Q9NWB7 429 aa28.71■■■□□ 2.19
RUNDC3A-205ENST00000590834 TRPM3Q9HCF6 1732 aaPredicted RBP28.7■■■□□ 2.19
RUNDC3A-205ENST00000590834 MST1RQ04912 1400 aa28.7■■■□□ 2.18
RUNDC3A-205ENST00000590834 RTL1A6NKG5 1358 aa28.7■■■□□ 2.18
RUNDC3A-205ENST00000590834 DCCP43146 1447 aa28.7■■■□□ 2.18
RUNDC3A-205ENST00000590834 GNAI1P63096 354 aa28.69■■■□□ 2.18
RUNDC3A-205ENST00000590834 STRCQ7RTU9 1775 aa28.69■■■□□ 2.18
RUNDC3A-205ENST00000590834 DCTN1Q14203 1278 aa28.68■■■□□ 2.18
RUNDC3A-205ENST00000590834 TNNQ9UQP3 1299 aa28.68■■■□□ 2.18
RUNDC3A-205ENST00000590834 SSH1Q8WYL5 1049 aa28.68■■■□□ 2.18
RUNDC3A-205ENST00000590834 ATF3P18847 181 aa28.67■■■□□ 2.18
RUNDC3A-205ENST00000590834 COG6Q9Y2V7 657 aa28.67■■■□□ 2.18
RUNDC3A-205ENST00000590834 CFAP44Q96MT7 982 aa28.66■■■□□ 2.18
RUNDC3A-205ENST00000590834 MBIPQ9NS73 344 aa28.66■■■□□ 2.18
RUNDC3A-205ENST00000590834 SMC4Q9NTJ3 1288 aa28.66■■■□□ 2.18
RUNDC3A-205ENST00000590834 RBM19Q9Y4C8 960 aaKnown RBP28.66■■■□□ 2.18
RUNDC3A-205ENST00000590834 RLBP1P12271 317 aa28.66■■■□□ 2.18
RUNDC3A-205ENST00000590834 KRT28Q7Z3Y7 464 aa28.66■■■□□ 2.18
RUNDC3A-205ENST00000590834 KCNH5Q8NCM2 988 aa28.66■■■□□ 2.18
RUNDC3A-205ENST00000590834 KDM2BQ8NHM5 1336 aa28.65■■■□□ 2.18
RUNDC3A-205ENST00000590834 IP6K1Q92551 441 aa28.64■■■□□ 2.18
RUNDC3A-205ENST00000590834 SLIT3O75094 1523 aa28.64■■■□□ 2.18
RUNDC3A-205ENST00000590834 PHRF1Q9P1Y6 1649 aaKnown RBP28.63■■■□□ 2.17
RUNDC3A-205ENST00000590834 MTHFSDQ2M296 383 aaKnown RBP28.62■■■□□ 2.17
RUNDC3A-205ENST00000590834 ZKSCAN2Q63HK3 967 aa28.62■■■□□ 2.17
RUNDC3A-205ENST00000590834 LTV1Q96GA3 475 aaPredicted RBP28.61■■■□□ 2.17
RUNDC3A-205ENST00000590834 XIRP1Q702N8 1843 aaKnown RBP28.6■■■□□ 2.17
RUNDC3A-205ENST00000590834 GCP02774 474 aa28.6■■■□□ 2.17
RUNDC3A-205ENST00000590834 ALDH1L2Q3SY69 923 aa28.6■■■□□ 2.17
RUNDC3A-205ENST00000590834 MCM10Q7L590 875 aa28.6■■■□□ 2.17
RUNDC3A-205ENST00000590834 CLUAP1Q96AJ1 413 aa28.6■■■□□ 2.17
RUNDC3A-205ENST00000590834 USP19O94966 1318 aa28.59■■■□□ 2.17
RUNDC3A-205ENST00000590834 VAMP4O75379 141 aa28.59■■■□□ 2.17
RUNDC3A-205ENST00000590834 CADPS2Q86UW7 1296 aa28.59■■■□□ 2.17
RUNDC3A-205ENST00000590834 TSPYL6Q8N831 410 aa28.59■■■□□ 2.17
RUNDC3A-205ENST00000590834 LMOD2Q6P5Q4 547 aa28.58■■■□□ 2.17
RUNDC3A-205ENST00000590834 ZNF428Q96B54 188 aa28.58■■■□□ 2.17
RUNDC3A-205ENST00000590834 ALS2Q96Q42 1657 aa28.58■■■□□ 2.17
RUNDC3A-205ENST00000590834 CENPQQ7L2Z9 268 aaPredicted RBP28.58■■■□□ 2.17
RUNDC3A-205ENST00000590834 TRIM27P14373 513 aa28.56■■■□□ 2.16
RUNDC3A-205ENST00000590834 NOB1Q9ULX3 412 aaKnown RBP28.56■■■□□ 2.16
RUNDC3A-205ENST00000590834 MSH6P52701 1360 aa28.56■■■□□ 2.16
RUNDC3A-205ENST00000590834 ARHGEF25Q86VW2 580 aa28.55■■■□□ 2.16
RUNDC3A-205ENST00000590834 DZIP1LQ8IYY4 767 aaKnown RBP28.55■■■□□ 2.16
RUNDC3A-205ENST00000590834 GAS2L2Q8NHY3 880 aa28.55■■■□□ 2.16
RUNDC3A-205ENST00000590834 CRB1P82279 1406 aa28.55■■■□□ 2.16
RUNDC3A-205ENST00000590834 DDX17Q92841 729 aaKnown RBP28.54■■■□□ 2.16
RUNDC3A-205ENST00000590834 ZBTB7CA1YPR0 619 aa28.54■■■□□ 2.16
RUNDC3A-205ENST00000590834 ATF7IPQ6VMQ6 1270 aa28.54■■■□□ 2.16
RUNDC3A-205ENST00000590834 C8orf58Q8NAV2 365 aa28.54■■■□□ 2.16
RUNDC3A-205ENST00000590834 CHL1O00533 1208 aa28.53■■■□□ 2.16
RUNDC3A-205ENST00000590834 PLEKHG5O94827 1062 aa28.53■■■□□ 2.16
RUNDC3A-205ENST00000590834 BRPF1P55201 1214 aaPredicted RBP28.53■■■□□ 2.16
RUNDC3A-205ENST00000590834 KIF16BQ96L93 1317 aa28.53■■■□□ 2.16
RUNDC3A-205ENST00000590834 USHBP1Q8N6Y0 703 aa28.53■■■□□ 2.16
RUNDC3A-205ENST00000590834 ELL2O00472 640 aaPredicted RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms