RNA–Protein interactions for RNA: ENST00000589333.2

UCA1-202, Transcript of urothelial cancer associated 1, humanhuman

TSL 3

Gene UCA1, Length 433 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-202ENST00000589333 HIRIP3Q9BW71 556 aaPredicted RBP8.83□□□□□ -1
UCA1-202ENST00000589333 CD163L1Q9NR16 1453 aa8.83□□□□□ -1
UCA1-202ENST00000589333 WASHC2AQ641Q2 1341 aa8.82□□□□□ -1
UCA1-202ENST00000589333 MINK1Q8N4C8 1332 aaPredicted RBP8.82□□□□□ -1
UCA1-202ENST00000589333 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
UCA1-202ENST00000589333 SAFB2Q14151 953 aaKnown RBP eCLIP8.82□□□□□ -1
UCA1-202ENST00000589333 KIF7Q2M1P5 1343 aa8.81□□□□□ -1
UCA1-202ENST00000589333 PRR36Q9H6K5 1346 aa8.81□□□□□ -1
UCA1-202ENST00000589333 NHSL1Q5SYE7 1610 aa8.81□□□□□ -1
UCA1-202ENST00000589333 CERKQ8TCT0 537 aa8.81□□□□□ -1
UCA1-202ENST00000589333 KHSRPQ92945 711 aaKnown RBP eCLIP8.81□□□□□ -1
UCA1-202ENST00000589333 POGKQ9P215 609 aa8.81□□□□□ -1
UCA1-202ENST00000589333 TRPM3Q9HCF6 1732 aaPredicted RBP8.8□□□□□ -1
UCA1-202ENST00000589333 WASLO00401 505 aaPredicted RBP8.8□□□□□ -1
UCA1-202ENST00000589333 GPR153Q6NV75 609 aa8.8□□□□□ -1
UCA1-202ENST00000589333 RBM33Q96EV2 1170 aaKnown RBP8.8□□□□□ -1
UCA1-202ENST00000589333 C1orf167Q5SNV9 1468 aa8.8□□□□□ -1
UCA1-202ENST00000589333 USP54Q70EL1 1684 aa8.8□□□□□ -1
UCA1-202ENST00000589333 EVC2Q86UK5 1308 aa8.8□□□□□ -1
UCA1-202ENST00000589333 ROBO1Q9Y6N7 1651 aa8.79□□□□□ -1
UCA1-202ENST00000589333 MSH6P52701 1360 aa8.79□□□□□ -1
UCA1-202ENST00000589333 ATAD2Q6PL18 1390 aa8.79□□□□□ -1
UCA1-202ENST00000589333 NINLQ9Y2I6 1382 aa8.79□□□□□ -1
UCA1-202ENST00000589333 TMF1P82094 1093 aa8.79□□□□□ -1
UCA1-202ENST00000589333 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
UCA1-202ENST00000589333 PUS7Q96PZ0 661 aaKnown RBP8.79□□□□□ -1
UCA1-202ENST00000589333 ANKRD26Q9UPS8 1709 aa8.79□□□□□ -1
UCA1-202ENST00000589333 MARF1Q9Y4F3 1742 aaKnown RBP8.79□□□□□ -1
UCA1-202ENST00000589333 KIF20BQ96Q89 1820 aa8.78□□□□□ -1
UCA1-202ENST00000589333 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
UCA1-202ENST00000589333 CPSF1Q10570 1443 aaKnown RBP8.78□□□□□ -1
UCA1-202ENST00000589333 PPIP5K1Q6PFW1 1433 aa8.78□□□□□ -1
UCA1-202ENST00000589333 CRYBG1Q9Y4K1 1723 aa8.77□□□□□ -1
UCA1-202ENST00000589333 AHDC1Q5TGY3 1603 aaPredicted RBP8.77□□□□□ -1.01
UCA1-202ENST00000589333 ARSIQ5FYB1 569 aa8.77□□□□□ -1.01
UCA1-202ENST00000589333 PIK3C2AO00443 1686 aa8.77□□□□□ -1.01
UCA1-202ENST00000589333 ALS2Q96Q42 1657 aa8.77□□□□□ -1.01
UCA1-202ENST00000589333 POLR3AO14802 1390 aaPredicted RBP8.76□□□□□ -1.01
UCA1-202ENST00000589333 SOX12O15370 315 aa8.76□□□□□ -1.01
UCA1-202ENST00000589333 SLC24A1O60721 1099 aa8.76□□□□□ -1.01
UCA1-202ENST00000589333 CDK19Q9BWU1 502 aa8.76□□□□□ -1.01
UCA1-202ENST00000589333 C19orf44Q9H6X5 657 aa8.76□□□□□ -1.01
UCA1-202ENST00000589333 A0A1W2PP64 1363 aa8.75□□□□□ -1.01
UCA1-202ENST00000589333 ANKRD36BQ8N2N9 1353 aa8.75□□□□□ -1.01
UCA1-202ENST00000589333 ABCA3Q99758 1704 aa8.75□□□□□ -1.01
UCA1-202ENST00000589333 SSH2Q76I76 1423 aa8.75□□□□□ -1.01
UCA1-202ENST00000589333 PXDNQ92626 1479 aa8.75□□□□□ -1.01
UCA1-202ENST00000589333 USP6P35125 1406 aa8.74□□□□□ -1.01
UCA1-202ENST00000589333 COL16A1Q07092 1604 aaPredicted RBP8.74□□□□□ -1.01
UCA1-202ENST00000589333 RIMBP2O15034 1052 aa8.74□□□□□ -1.01
UCA1-202ENST00000589333 SRPK2P78362 688 aaKnown RBP8.74□□□□□ -1.01
UCA1-202ENST00000589333 CDCA8Q53HL2 280 aa8.74□□□□□ -1.01
UCA1-202ENST00000589333 FBXO22Q8NEZ5 403 aa8.74□□□□□ -1.01
UCA1-202ENST00000589333 RNF166Q96A37 237 aaPredicted RBP8.74□□□□□ -1.01
UCA1-202ENST00000589333 NUDT16Q96DE0 195 aaKnown RBP8.74□□□□□ -1.01
UCA1-202ENST00000589333 MED1Q15648 1581 aaPredicted RBP8.73□□□□□ -1.01
UCA1-202ENST00000589333 C14orf37Q86TY3 774 aa8.73□□□□□ -1.01
UCA1-202ENST00000589333 CADPS2Q86UW7 1296 aa8.73□□□□□ -1.01
UCA1-202ENST00000589333 PHRF1Q9P1Y6 1649 aaKnown RBP8.72□□□□□ -1.01
UCA1-202ENST00000589333 PLEKHG3A1L390 1219 aa8.72□□□□□ -1.01
UCA1-202ENST00000589333 ZNF687Q8N1G0 1237 aa8.72□□□□□ -1.01
UCA1-202ENST00000589333 BCL11BQ9C0K0 894 aaPredicted RBP8.72□□□□□ -1.01
UCA1-202ENST00000589333 EDC4Q6P2E9 1401 aaKnown RBP8.71□□□□□ -1.01
UCA1-202ENST00000589333 NSD3Q9BZ95 1437 aa8.71□□□□□ -1.01
UCA1-202ENST00000589333 PHLPP1O60346 1717 aa8.71□□□□□ -1.01
UCA1-202ENST00000589333 NUTM2FA1L443 756 aa8.71□□□□□ -1.02
UCA1-202ENST00000589333 ORAI2Q96SN7 254 aa8.71□□□□□ -1.02
UCA1-202ENST00000589333 SLC12A5Q9H2X9 1139 aa8.71□□□□□ -1.02
UCA1-202ENST00000589333 COL22A1Q8NFW1 1626 aaPredicted RBP8.71□□□□□ -1.02
UCA1-202ENST00000589333 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.02
UCA1-202ENST00000589333 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.02
UCA1-202ENST00000589333 ATF3P18847 181 aa8.7□□□□□ -1.02
UCA1-202ENST00000589333 BRINP3Q76B58 766 aa8.7□□□□□ -1.02
UCA1-202ENST00000589333 MFRPQ9BY79 579 aa8.7□□□□□ -1.02
UCA1-202ENST00000589333 ZSWIM6Q9HCJ5 1215 aa8.7□□□□□ -1.02
UCA1-202ENST00000589333 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
UCA1-202ENST00000589333 SLIT3O75094 1523 aa8.7□□□□□ -1.02
UCA1-202ENST00000589333 SHPRHQ149N8 1683 aa8.69□□□□□ -1.02
UCA1-202ENST00000589333 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
UCA1-202ENST00000589333 CARD14Q9BXL6 1004 aa8.69□□□□□ -1.02
UCA1-202ENST00000589333 ACEP12821 1306 aa8.69□□□□□ -1.02
UCA1-202ENST00000589333 BRD4O60885 1362 aaPredicted RBP8.69□□□□□ -1.02
UCA1-202ENST00000589333 KTN1Q86UP2 1357 aaKnown RBP8.69□□□□□ -1.02
UCA1-202ENST00000589333 NPC1L1Q9UHC9 1359 aa8.69□□□□□ -1.02
UCA1-202ENST00000589333 POLR3GLQ9BT43 218 aa8.68□□□□□ -1.02
UCA1-202ENST00000589333 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
UCA1-202ENST00000589333 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
UCA1-202ENST00000589333 TNS3Q68CZ2 1445 aa8.68□□□□□ -1.02
UCA1-202ENST00000589333 NFAT5O94916 1531 aa8.67□□□□□ -1.02
UCA1-202ENST00000589333 NSD2O96028 1365 aa8.67□□□□□ -1.02
UCA1-202ENST00000589333 NLRP6P59044 892 aa8.67□□□□□ -1.02
UCA1-202ENST00000589333 DDX10Q13206 875 aaKnown RBP8.67□□□□□ -1.02
UCA1-202ENST00000589333 ESCO1Q5FWF5 840 aa8.67□□□□□ -1.02
UCA1-202ENST00000589333 ANKRD13DQ6ZTN6 518 aa8.67□□□□□ -1.02
UCA1-202ENST00000589333 PMFBP1Q8TBY8 1022 aa8.67□□□□□ -1.02
UCA1-202ENST00000589333 TMC1Q8TDI8 760 aa8.67□□□□□ -1.02
UCA1-202ENST00000589333 PANK3Q9H999 370 aa8.67□□□□□ -1.02
UCA1-202ENST00000589333 SBNO1A3KN83 1393 aa8.66□□□□□ -1.02
UCA1-202ENST00000589333 SOS2Q07890 1332 aaPredicted RBP8.66□□□□□ -1.02
UCA1-202ENST00000589333 NPHP3Q7Z494 1330 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms