RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 NBPF14Q5TI25 921 aa5.85□□□□□ -1.47
ZNF540-207ENST00000589285 VASH1Q7L8A9 365 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-207ENST00000589285 V9GY48 417 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-207ENST00000589285 CARNS1A5YM72 827 aa5.85□□□□□ -1.47
ZNF540-207ENST00000589285 WNT7AO00755 349 aa5.85□□□□□ -1.47
ZNF540-207ENST00000589285 FLIIQ13045 1269 aa5.85□□□□□ -1.47
ZNF540-207ENST00000589285 GLMNQ92990 594 aa5.85□□□□□ -1.47
ZNF540-207ENST00000589285 TOR4AQ9NXH8 423 aa5.85□□□□□ -1.47
ZNF540-207ENST00000589285 RPIAP49247 311 aa5.84□□□□□ -1.47
ZNF540-207ENST00000589285 INTS6LQ5JSJ4 861 aaKnown RBP5.84□□□□□ -1.47
ZNF540-207ENST00000589285 PDXDC2PQ6P474 469 aa5.84□□□□□ -1.47
ZNF540-207ENST00000589285 CYP4X1Q8N118 509 aa5.84□□□□□ -1.47
ZNF540-207ENST00000589285 SLC10A4Q96EP9 437 aa5.84□□□□□ -1.47
ZNF540-207ENST00000589285 KCTD15Q96SI1 283 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-207ENST00000589285 CYLDQ9NQC7 956 aa5.84□□□□□ -1.47
ZNF540-207ENST00000589285 WNT7BP56706 349 aa5.83□□□□□ -1.48
ZNF540-207ENST00000589285 DZIP3Q86Y13 1208 aaKnown RBP5.83□□□□□ -1.48
ZNF540-207ENST00000589285 ZMYND15Q9H091 742 aa5.83□□□□□ -1.48
ZNF540-207ENST00000589285 SOBPA7XYQ1 873 aa5.83□□□□□ -1.48
ZNF540-207ENST00000589285 NNTQ13423 1086 aa5.83□□□□□ -1.48
ZNF540-207ENST00000589285 AGBL1Q96MI9 1066 aa5.83□□□□□ -1.48
ZNF540-207ENST00000589285 TRAK2O60296 914 aa5.82□□□□□ -1.48
ZNF540-207ENST00000589285 NR1H3Q13133 447 aa5.82□□□□□ -1.48
ZNF540-207ENST00000589285 TBC1D9Q6ZT07 1266 aa5.82□□□□□ -1.48
ZNF540-207ENST00000589285 CCDC85AQ96PX6 553 aaPredicted RBP5.82□□□□□ -1.48
ZNF540-207ENST00000589285 RAB6BQ9NRW1 208 aa5.82□□□□□ -1.48
ZNF540-207ENST00000589285 ERVH48-1M5A8F1 160 aa5.82□□□□□ -1.48
ZNF540-207ENST00000589285 PTK2Q05397 1052 aa5.82□□□□□ -1.48
ZNF540-207ENST00000589285 ADD1P35611 737 aaKnown RBP5.81□□□□□ -1.48
ZNF540-207ENST00000589285 ZNF784Q8NCA9 323 aaPredicted RBP5.81□□□□□ -1.48
ZNF540-207ENST00000589285 WDR4P57081 412 aaKnown RBP5.81□□□□□ -1.48
ZNF540-207ENST00000589285 PPP1R26Q5T8A7 1209 aaPredicted RBP5.81□□□□□ -1.48
ZNF540-207ENST00000589285 CALR3Q96L12 384 aaKnown RBP5.81□□□□□ -1.48
ZNF540-207ENST00000589285 C1QTNF2Q9BXJ5 285 aa5.81□□□□□ -1.48
ZNF540-207ENST00000589285 WASF2Q9Y6W5 498 aa5.81□□□□□ -1.48
ZNF540-207ENST00000589285 ADH1CP00326 375 aa5.8□□□□□ -1.48
ZNF540-207ENST00000589285 VARSP26640 1264 aaKnown RBP5.8□□□□□ -1.48
ZNF540-207ENST00000589285 OXLD1Q5BKU9 147 aa5.8□□□□□ -1.48
ZNF540-207ENST00000589285 CCDC82Q8N4S0 544 aa5.8□□□□□ -1.48
ZNF540-207ENST00000589285 ZNF395Q9H8N7 513 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-207ENST00000589285 CEP126Q9P2H0 1117 aa5.8□□□□□ -1.48
ZNF540-207ENST00000589285 C6orf118Q5T5N4 469 aa5.8□□□□□ -1.48
ZNF540-207ENST00000589285 ZIC2O95409 532 aaPredicted RBP5.79□□□□□ -1.48
ZNF540-207ENST00000589285 ALG2Q9H553 416 aa5.79□□□□□ -1.48
ZNF540-207ENST00000589285 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.79□□□□□ -1.48
ZNF540-207ENST00000589285 RELBQ01201 579 aa5.79□□□□□ -1.48
ZNF540-207ENST00000589285 PKDCCQ504Y2 493 aa5.79□□□□□ -1.48
ZNF540-207ENST00000589285 KLF16Q9BXK1 252 aaPredicted RBP5.79□□□□□ -1.48
ZNF540-207ENST00000589285 TFIP11Q9UBB9 837 aaKnown RBP5.79□□□□□ -1.48
ZNF540-207ENST00000589285 TIMP2P16035 220 aa5.78□□□□□ -1.48
ZNF540-207ENST00000589285 NCOA4Q13772 614 aa5.78□□□□□ -1.48
ZNF540-207ENST00000589285 SNIP1Q8TAD8 396 aaKnown RBP5.78□□□□□ -1.48
ZNF540-207ENST00000589285 PCDHB11Q9Y5F2 797 aa5.78□□□□□ -1.48
ZNF540-207ENST00000589285 KDF1Q8NAX2 398 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-207ENST00000589285 ARMC2Q8NEN0 867 aa5.78□□□□□ -1.48
ZNF540-207ENST00000589285 SEMA3FQ13275 785 aa5.77□□□□□ -1.49
ZNF540-207ENST00000589285 KIAA1024Q9UPX6 916 aa5.77□□□□□ -1.49
ZNF540-207ENST00000589285 SKIP12755 728 aa5.77□□□□□ -1.49
ZNF540-207ENST00000589285 CCDC116Q8IYX3 515 aa5.77□□□□□ -1.49
ZNF540-207ENST00000589285 ZNF594Q96JF6 807 aaPredicted RBP5.77□□□□□ -1.49
ZNF540-207ENST00000589285 RNF135Q8IUD6 432 aa5.77□□□□□ -1.49
ZNF540-207ENST00000589285 MYT1Q01538 1121 aa5.76□□□□□ -1.49
ZNF540-207ENST00000589285 CDK15Q96Q40 435 aa5.76□□□□□ -1.49
ZNF540-207ENST00000589285 PALM3A6NDB9 673 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-207ENST00000589285 RGS20O76081 388 aa5.76□□□□□ -1.49
ZNF540-207ENST00000589285 SCNN1AP37088 669 aa5.76□□□□□ -1.49
ZNF540-207ENST00000589285 AAASQ9NRG9 546 aa5.76□□□□□ -1.49
ZNF540-207ENST00000589285 SCRIBQ14160 1630 aa5.76□□□□□ -1.49
ZNF540-207ENST00000589285 CAPN5O15484 640 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-207ENST00000589285 LILRA1O75019 489 aa5.75□□□□□ -1.49
ZNF540-207ENST00000589285 PRR20EP86478 221 aa5.75□□□□□ -1.49
ZNF540-207ENST00000589285 PRR20CP86479 221 aa5.75□□□□□ -1.49
ZNF540-207ENST00000589285 PRR20DP86480 221 aa5.75□□□□□ -1.49
ZNF540-207ENST00000589285 PRR20BP86481 221 aa5.75□□□□□ -1.49
ZNF540-207ENST00000589285 PRR20AP86496 221 aa5.75□□□□□ -1.49
ZNF540-207ENST00000589285 NBPF20Q3BBV1 942 aa5.75□□□□□ -1.49
ZNF540-207ENST00000589285 EIF4G1Q04637 1599 aaKnown RBP5.75□□□□□ -1.49
ZNF540-207ENST00000589285 A6NJR5 290 aa5.75□□□□□ -1.49
ZNF540-207ENST00000589285 PURBQ96QR8 312 aaKnown RBP5.75□□□□□ -1.49
ZNF540-207ENST00000589285 PEG3Q9GZU2 1588 aa5.75□□□□□ -1.49
ZNF540-207ENST00000589285 FIGNL2A6NMB9 653 aa5.74□□□□□ -1.49
ZNF540-207ENST00000589285 LMOD1P29536 600 aaPredicted RBP5.74□□□□□ -1.49
ZNF540-207ENST00000589285 EIF4G2P78344 907 aaKnown RBP eCLIP5.74□□□□□ -1.49
ZNF540-207ENST00000589285 SLFNL1Q499Z3 407 aa5.74□□□□□ -1.49
ZNF540-207ENST00000589285 TBCELQ5QJ74 424 aa5.74□□□□□ -1.49
ZNF540-207ENST00000589285 TRAF7Q6Q0C0 670 aa5.74□□□□□ -1.49
ZNF540-207ENST00000589285 TRIM46Q7Z4K8 759 aa5.74□□□□□ -1.49
ZNF540-207ENST00000589285 PHTF2Q8N3S3 785 aa5.74□□□□□ -1.49
ZNF540-207ENST00000589285 INSM2Q96T92 566 aaPredicted RBP5.74□□□□□ -1.49
ZNF540-207ENST00000589285 ARHGEF10LQ9HCE6 1279 aa5.74□□□□□ -1.49
ZNF540-207ENST00000589285 GMPR2Q9P2T1 348 aaKnown RBP5.74□□□□□ -1.49
ZNF540-207ENST00000589285 TRMT44Q8IYL2 757 aaKnown RBP5.74□□□□□ -1.49
ZNF540-207ENST00000589285 PLPP7Q8NBV4 271 aa5.74□□□□□ -1.49
ZNF540-207ENST00000589285 ZFP42Q96MM3 310 aa5.74□□□□□ -1.49
ZNF540-207ENST00000589285 USP17L5A8MUK1 530 aa5.73□□□□□ -1.49
ZNF540-207ENST00000589285 AXIN1O15169 862 aa5.73□□□□□ -1.49
ZNF540-207ENST00000589285 VEGFBP49765 207 aa5.73□□□□□ -1.49
ZNF540-207ENST00000589285 GPKOWQ92917 476 aaPredicted RBP eCLIP5.73□□□□□ -1.49
ZNF540-207ENST00000589285 CC2D2AQ9P2K1 1620 aa5.73□□□□□ -1.49
ZNF540-207ENST00000589285 CLDN10P78369 228 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms