RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
ERCC2-211ENST00000588652 USP6P35125 1406 aa22.49■■□□□ 1.19
ERCC2-211ENST00000588652 NFE2L2Q16236 605 aa22.48■■□□□ 1.19
ERCC2-211ENST00000588652 ZKSCAN2Q63HK3 967 aa22.48■■□□□ 1.19
ERCC2-211ENST00000588652 SMC4Q9NTJ3 1288 aa22.47■■□□□ 1.19
ERCC2-211ENST00000588652 OVOS2A0A0J9YW53 1432 aa22.47■■□□□ 1.19
ERCC2-211ENST00000588652 OVOS2Q6IE36 1432 aa22.47■■□□□ 1.19
ERCC2-211ENST00000588652 SSH1Q8WYL5 1049 aa22.46■■□□□ 1.19
ERCC2-211ENST00000588652 USP35Q9P2H5 1018 aa22.45■■□□□ 1.18
ERCC2-211ENST00000588652 NALCNQ8IZF0 1738 aa22.44■■□□□ 1.18
ERCC2-211ENST00000588652 XRN1Q8IZH2 1706 aaKnown RBP22.44■■□□□ 1.18
ERCC2-211ENST00000588652 MVPQ14764 893 aaKnown RBP22.43■■□□□ 1.18
ERCC2-211ENST00000588652 SSH2Q76I76 1423 aa22.43■■□□□ 1.18
ERCC2-211ENST00000588652 DZIP1LQ8IYY4 767 aaKnown RBP22.43■■□□□ 1.18
ERCC2-211ENST00000588652 DLG5Q8TDM6 1919 aa22.43■■□□□ 1.18
ERCC2-211ENST00000588652 PCDHB15Q9Y5E8 787 aa22.42■■□□□ 1.18
ERCC2-211ENST00000588652 RGPD8O14715 1765 aaPredicted RBP22.42■■□□□ 1.18
ERCC2-211ENST00000588652 CEP170BQ9Y4F5 1589 aaPredicted RBP22.42■■□□□ 1.18
ERCC2-211ENST00000588652 FTSJ3Q8IY81 847 aaKnown RBP22.42■■□□□ 1.18
ERCC2-211ENST00000588652 PMFBP1Q8TBY8 1022 aa22.42■■□□□ 1.18
ERCC2-211ENST00000588652 DAXXQ9UER7 740 aaPredicted RBP22.42■■□□□ 1.18
ERCC2-211ENST00000588652 TRIM27P14373 513 aa22.41■■□□□ 1.18
ERCC2-211ENST00000588652 CALD1Q05682 793 aaKnown RBP22.4■■□□□ 1.18
ERCC2-211ENST00000588652 THUMPD2Q9BTF0 503 aaKnown RBP22.4■■□□□ 1.18
ERCC2-211ENST00000588652 USP31Q70CQ4 1352 aa22.4■■□□□ 1.18
ERCC2-211ENST00000588652 SLC4A3P48751 1232 aa22.39■■□□□ 1.18
ERCC2-211ENST00000588652 ATF7IPQ6VMQ6 1270 aa22.39■■□□□ 1.18
ERCC2-211ENST00000588652 EIF4A2Q14240 407 aaKnown RBP22.39■■□□□ 1.17
ERCC2-211ENST00000588652 NOB1Q9ULX3 412 aaKnown RBP22.38■■□□□ 1.17
ERCC2-211ENST00000588652 TTC21AQ8NDW8 1320 aa22.38■■□□□ 1.17
ERCC2-211ENST00000588652 ALDH1L2Q3SY69 923 aa22.38■■□□□ 1.17
ERCC2-211ENST00000588652 PEAK1Q9H792 1746 aa22.38■■□□□ 1.17
ERCC2-211ENST00000588652 RIMS1Q86UR5 1692 aaKnown RBP22.37■■□□□ 1.17
ERCC2-211ENST00000588652 KIF16BQ96L93 1317 aa22.37■■□□□ 1.17
ERCC2-211ENST00000588652 IFT57Q9NWB7 429 aa22.37■■□□□ 1.17
ERCC2-211ENST00000588652 PIK3R4Q99570 1358 aa22.36■■□□□ 1.17
ERCC2-211ENST00000588652 KCNA6P17658 529 aa22.36■■□□□ 1.17
ERCC2-211ENST00000588652 GNAI1P63096 354 aa22.36■■□□□ 1.17
ERCC2-211ENST00000588652 LMOD3Q0VAK6 560 aa22.36■■□□□ 1.17
ERCC2-211ENST00000588652 ZNF428Q96B54 188 aa22.36■■□□□ 1.17
ERCC2-211ENST00000588652 ZNF853P0CG23 659 aa22.36■■□□□ 1.17
ERCC2-211ENST00000588652 NGDNQ8NEJ9 315 aaKnown RBP22.35■■□□□ 1.17
ERCC2-211ENST00000588652 HSP90AB2PQ58FF8 381 aa22.33■■□□□ 1.17
ERCC2-211ENST00000588652 AEBP1Q8IUX7 1158 aa22.33■■□□□ 1.17
ERCC2-211ENST00000588652 RWDD1Q9H446 243 aaPredicted RBP22.33■■□□□ 1.17
ERCC2-211ENST00000588652 RGPD1P0DJD0 1748 aa22.33■■□□□ 1.17
ERCC2-211ENST00000588652 IPO8O15397 1037 aaKnown RBP22.33■■□□□ 1.17
ERCC2-211ENST00000588652 BRPF1P55201 1214 aaPredicted RBP22.33■■□□□ 1.17
ERCC2-211ENST00000588652 SULT6B1Q6IMI4 303 aa22.33■■□□□ 1.17
ERCC2-211ENST00000588652 DDX19BQ9UMR2 479 aa22.33■■□□□ 1.17
ERCC2-211ENST00000588652 USP19O94966 1318 aa22.33■■□□□ 1.16
ERCC2-211ENST00000588652 MBIPQ9NS73 344 aa22.32■■□□□ 1.16
ERCC2-211ENST00000588652 ANKARQ7Z5J8 1434 aa22.32■■□□□ 1.16
ERCC2-211ENST00000588652 VAMP4O75379 141 aa22.32■■□□□ 1.16
ERCC2-211ENST00000588652 ITPRIPQ8IWB1 547 aa22.32■■□□□ 1.16
ERCC2-211ENST00000588652 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
ERCC2-211ENST00000588652 FAM83GA6ND36 823 aa22.31■■□□□ 1.16
ERCC2-211ENST00000588652 SOX12O15370 315 aa22.31■■□□□ 1.16
ERCC2-211ENST00000588652 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
ERCC2-211ENST00000588652 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
ERCC2-211ENST00000588652 TSPYL6Q8N831 410 aa22.3■■□□□ 1.16
ERCC2-211ENST00000588652 FMN2Q9NZ56 1722 aa22.3■■□□□ 1.16
ERCC2-211ENST00000588652 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
ERCC2-211ENST00000588652 ZNF142P52746 1687 aaPredicted RBP22.29■■□□□ 1.16
ERCC2-211ENST00000588652 DCTN1Q14203 1278 aa22.28■■□□□ 1.16
ERCC2-211ENST00000588652 CHD2O14647 1828 aaKnown RBP22.28■■□□□ 1.16
ERCC2-211ENST00000588652 NFKBIBQ15653 356 aa22.28■■□□□ 1.16
ERCC2-211ENST00000588652 SEC24BO95487 1268 aa22.27■■□□□ 1.16
ERCC2-211ENST00000588652 ANKLE2Q86XL3 938 aa22.27■■□□□ 1.16
ERCC2-211ENST00000588652 PDZRN3Q9UPQ7 1066 aa22.27■■□□□ 1.16
ERCC2-211ENST00000588652 MRPL50Q8N5N7 158 aaKnown RBP22.26■■□□□ 1.15
ERCC2-211ENST00000588652 SBNO1A3KN83 1393 aa22.26■■□□□ 1.15
ERCC2-211ENST00000588652 FLT4P35916 1363 aa22.26■■□□□ 1.15
ERCC2-211ENST00000588652 ZBTB40Q9NUA8 1239 aa22.26■■□□□ 1.15
ERCC2-211ENST00000588652 ELL2O00472 640 aaPredicted RBP22.25■■□□□ 1.15
ERCC2-211ENST00000588652 TWISTNBQ3B726 338 aaPredicted RBP22.25■■□□□ 1.15
ERCC2-211ENST00000588652 HDAC1Q13547 482 aaPredicted RBP22.25■■□□□ 1.15
ERCC2-211ENST00000588652 ADAMTSL3P82987 1691 aa22.24■■□□□ 1.15
ERCC2-211ENST00000588652 ARHGEF10O15013 1369 aa22.24■■□□□ 1.15
ERCC2-211ENST00000588652 C8orf58Q8NAV2 365 aa22.24■■□□□ 1.15
ERCC2-211ENST00000588652 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
ERCC2-211ENST00000588652 SETD1BQ9UPS6 1966 aaKnown RBP22.23■■□□□ 1.15
ERCC2-211ENST00000588652 MARF1Q9Y4F3 1742 aaKnown RBP22.22■■□□□ 1.15
ERCC2-211ENST00000588652 NLRP6P59044 892 aa22.22■■□□□ 1.15
ERCC2-211ENST00000588652 USP54Q70EL1 1684 aa22.2■■□□□ 1.15
ERCC2-211ENST00000588652 AMPHP49418 695 aa22.2■■□□□ 1.14
ERCC2-211ENST00000588652 KDRP35968 1356 aa22.2■■□□□ 1.14
ERCC2-211ENST00000588652 MCM10Q7L590 875 aa22.19■■□□□ 1.14
ERCC2-211ENST00000588652 CHL1O00533 1208 aa22.18■■□□□ 1.14
ERCC2-211ENST00000588652 IGSF1Q8N6C5 1336 aa22.17■■□□□ 1.14
ERCC2-211ENST00000588652 NUTM2GQ5VZR2 741 aa22.17■■□□□ 1.14
ERCC2-211ENST00000588652 SMC5Q8IY18 1101 aa22.17■■□□□ 1.14
ERCC2-211ENST00000588652 EYA1Q99502 592 aa22.17■■□□□ 1.14
ERCC2-211ENST00000588652 ABTB2Q8N961 1025 aa22.16■■□□□ 1.14
ERCC2-211ENST00000588652 ABCC4O15439 1325 aa22.16■■□□□ 1.14
ERCC2-211ENST00000588652 KIF24Q5T7B8 1368 aa22.16■■□□□ 1.14
ERCC2-211ENST00000588652 ZBTB7BO15156 539 aaPredicted RBP22.16■■□□□ 1.14
ERCC2-211ENST00000588652 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
ERCC2-211ENST00000588652 PHF8Q9UPP1 1060 aa22.15■■□□□ 1.14
ERCC2-211ENST00000588652 MTHFSDQ2M296 383 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms