RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 TMPOP42166 694 aaKnown RBP11.43□□□□□ -0.58
NEDD4L-221ENST00000588066 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
NEDD4L-221ENST00000588066 PSME1Q06323 249 aa11.42□□□□□ -0.58
NEDD4L-221ENST00000588066 C19orf44Q9H6X5 657 aa11.42□□□□□ -0.58
NEDD4L-221ENST00000588066 PODXL2Q9NZ53 605 aa11.42□□□□□ -0.58
NEDD4L-221ENST00000588066 RRP7AQ9Y3A4 280 aaKnown RBP11.42□□□□□ -0.58
NEDD4L-221ENST00000588066 RGPD8O14715 1765 aaPredicted RBP11.41□□□□□ -0.58
NEDD4L-221ENST00000588066 PRKAR2BP31323 418 aa11.41□□□□□ -0.58
NEDD4L-221ENST00000588066 RIPK4P57078 832 aa11.41□□□□□ -0.58
NEDD4L-221ENST00000588066 NLRP6P59044 892 aa11.41□□□□□ -0.58
NEDD4L-221ENST00000588066 C1QBPQ07021 282 aaKnown RBP11.41□□□□□ -0.58
NEDD4L-221ENST00000588066 ESCO1Q5FWF5 840 aa11.41□□□□□ -0.58
NEDD4L-221ENST00000588066 CCDC136Q96JN2 1154 aa11.41□□□□□ -0.58
NEDD4L-221ENST00000588066 RSPH6AQ9H0K4 717 aa11.41□□□□□ -0.58
NEDD4L-221ENST00000588066 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
NEDD4L-221ENST00000588066 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
NEDD4L-221ENST00000588066 AMPHP49418 695 aa11.4□□□□□ -0.58
NEDD4L-221ENST00000588066 RRS1Q15050 365 aaKnown RBP11.4□□□□□ -0.58
NEDD4L-221ENST00000588066 NFE2L2Q16236 605 aa11.4□□□□□ -0.58
NEDD4L-221ENST00000588066 ABTB2Q8N961 1025 aa11.4□□□□□ -0.58
NEDD4L-221ENST00000588066 FLT4P35916 1363 aa11.4□□□□□ -0.59
NEDD4L-221ENST00000588066 USP54Q70EL1 1684 aa11.4□□□□□ -0.59
NEDD4L-221ENST00000588066 PAK3O75914 559 aaPredicted RBP11.39□□□□□ -0.59
NEDD4L-221ENST00000588066 ATF3P18847 181 aa11.39□□□□□ -0.59
NEDD4L-221ENST00000588066 DCCP43146 1447 aa11.39□□□□□ -0.59
NEDD4L-221ENST00000588066 KCNH5Q8NCM2 988 aa11.39□□□□□ -0.59
NEDD4L-221ENST00000588066 MS4A1P11836 297 aa11.38□□□□□ -0.59
NEDD4L-221ENST00000588066 KIF1AQ12756 1690 aa11.38□□□□□ -0.59
NEDD4L-221ENST00000588066 HMOX1P09601 288 aa11.37□□□□□ -0.59
NEDD4L-221ENST00000588066 FBLN1P23142 703 aa11.37□□□□□ -0.59
NEDD4L-221ENST00000588066 CANXP27824 592 aaKnown RBP11.37□□□□□ -0.59
NEDD4L-221ENST00000588066 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
NEDD4L-221ENST00000588066 CADPS2Q86UW7 1296 aa11.37□□□□□ -0.59
NEDD4L-221ENST00000588066 RTL1A6NKG5 1358 aa11.37□□□□□ -0.59
NEDD4L-221ENST00000588066 ARHGEF10O15013 1369 aa11.37□□□□□ -0.59
NEDD4L-221ENST00000588066 MAP3K19Q56UN5 1328 aa11.36□□□□□ -0.59
NEDD4L-221ENST00000588066 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
NEDD4L-221ENST00000588066 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
NEDD4L-221ENST00000588066 TRIM35Q9UPQ4 493 aa11.36□□□□□ -0.59
NEDD4L-221ENST00000588066 PIK3C2AO00443 1686 aa11.36□□□□□ -0.59
NEDD4L-221ENST00000588066 GNAI1P63096 354 aa11.35□□□□□ -0.59
NEDD4L-221ENST00000588066 AAMPQ13685 434 aa11.35□□□□□ -0.59
NEDD4L-221ENST00000588066 PDE3AQ14432 1141 aa11.35□□□□□ -0.59
NEDD4L-221ENST00000588066 B4GALNT3Q6L9W6 998 aa11.35□□□□□ -0.59
NEDD4L-221ENST00000588066 MSH6P52701 1360 aa11.35□□□□□ -0.59
NEDD4L-221ENST00000588066 C1orf167Q5SNV9 1468 aa11.34□□□□□ -0.59
NEDD4L-221ENST00000588066 TMEM94Q12767 1356 aa11.34□□□□□ -0.59
NEDD4L-221ENST00000588066 SOX12O15370 315 aa11.34□□□□□ -0.59
NEDD4L-221ENST00000588066 SULT6B1Q6IMI4 303 aa11.34□□□□□ -0.59
NEDD4L-221ENST00000588066 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
NEDD4L-221ENST00000588066 HSPA2P54652 639 aa11.33□□□□□ -0.6
NEDD4L-221ENST00000588066 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
NEDD4L-221ENST00000588066 KRT28Q7Z3Y7 464 aa11.33□□□□□ -0.6
NEDD4L-221ENST00000588066 RBM33Q96EV2 1170 aaKnown RBP11.33□□□□□ -0.6
NEDD4L-221ENST00000588066 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
NEDD4L-221ENST00000588066 FANCIQ9NVI1 1328 aa11.33□□□□□ -0.6
NEDD4L-221ENST00000588066 PLIN1O60240 522 aa11.32□□□□□ -0.6
NEDD4L-221ENST00000588066 RARSP54136 660 aaKnown RBP11.32□□□□□ -0.6
NEDD4L-221ENST00000588066 GAS2L2Q8NHY3 880 aa11.32□□□□□ -0.6
NEDD4L-221ENST00000588066 PHACTR3Q96KR7 559 aa11.32□□□□□ -0.6
NEDD4L-221ENST00000588066 ORAI2Q96SN7 254 aa11.32□□□□□ -0.6
NEDD4L-221ENST00000588066 CRBNQ96SW2 442 aa11.32□□□□□ -0.6
NEDD4L-221ENST00000588066 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
NEDD4L-221ENST00000588066 LMTK3Q96Q04 1460 aa11.32□□□□□ -0.6
NEDD4L-221ENST00000588066 IPO8O15397 1037 aaKnown RBP11.31□□□□□ -0.6
NEDD4L-221ENST00000588066 FOXO3O43524 673 aa11.31□□□□□ -0.6
NEDD4L-221ENST00000588066 HOXC9P31274 260 aa11.31□□□□□ -0.6
NEDD4L-221ENST00000588066 NUTM2GQ5VZR2 741 aa11.31□□□□□ -0.6
NEDD4L-221ENST00000588066 IP6K1Q92551 441 aa11.31□□□□□ -0.6
NEDD4L-221ENST00000588066 IGSF1Q8N6C5 1336 aa11.31□□□□□ -0.6
NEDD4L-221ENST00000588066 RGPD1P0DJD0 1748 aa11.3□□□□□ -0.6
NEDD4L-221ENST00000588066 MST1RQ04912 1400 aa11.3□□□□□ -0.6
NEDD4L-221ENST00000588066 HTATSF1O43719 755 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-221ENST00000588066 BCAR3O75815 825 aa11.3□□□□□ -0.6
NEDD4L-221ENST00000588066 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
NEDD4L-221ENST00000588066 EXOSC9Q06265 439 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-221ENST00000588066 TMEM132AQ24JP5 1023 aa11.3□□□□□ -0.6
NEDD4L-221ENST00000588066 ALDH1L2Q3SY69 923 aa11.3□□□□□ -0.6
NEDD4L-221ENST00000588066 NPHP3Q7Z494 1330 aa11.3□□□□□ -0.6
NEDD4L-221ENST00000588066 KDRP35968 1356 aa11.29□□□□□ -0.6
NEDD4L-221ENST00000588066 ZKSCAN2Q63HK3 967 aa11.29□□□□□ -0.6
NEDD4L-221ENST00000588066 RTF1Q92541 710 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-221ENST00000588066 CFAP44Q96MT7 982 aa11.29□□□□□ -0.6
NEDD4L-221ENST00000588066 LMOD2Q6P5Q4 547 aa11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 FRAT1Q92837 279 aaPredicted RBP11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 EYA1Q99502 592 aa11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 CHMP4BQ9H444 224 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 SMC4Q9NTJ3 1288 aa11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 LAS1LQ9Y4W2 734 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 MARF1Q9Y4F3 1742 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 SLIT3O75094 1523 aa11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 USP19O94966 1318 aa11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 KIF16BQ96L93 1317 aa11.28□□□□□ -0.6
NEDD4L-221ENST00000588066 NFAT5O94916 1531 aa11.27□□□□□ -0.61
NEDD4L-221ENST00000588066 GCP02774 474 aa11.27□□□□□ -0.61
NEDD4L-221ENST00000588066 ZNF853P0CG23 659 aa11.27□□□□□ -0.61
NEDD4L-221ENST00000588066 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
NEDD4L-221ENST00000588066 AEBP1Q8IUX7 1158 aa11.27□□□□□ -0.61
NEDD4L-221ENST00000588066 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms