RNA–Protein interactions for RNA: ENST00000587597.5

RTN2-204, Transcript of reticulon 2, humanhuman

TSL 5

Gene RTN2, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-204ENST00000587597 PHACTR3Q96KR7 559 aa32.11■■■□□ 2.73
RTN2-204ENST00000587597 NCBP3Q53F19 620 aaKnown RBP32.11■■■□□ 2.73
RTN2-204ENST00000587597 CCDC27Q2M243 656 aa32.1■■■□□ 2.73
RTN2-204ENST00000587597 ZNF335Q9H4Z2 1342 aaPredicted RBP32.09■■■□□ 2.73
RTN2-204ENST00000587597 XIRP1Q702N8 1843 aaKnown RBP32.09■■■□□ 2.73
RTN2-204ENST00000587597 TRIM35Q9UPQ4 493 aa32.08■■■□□ 2.73
RTN2-204ENST00000587597 ATF3P18847 181 aa32.08■■■□□ 2.73
RTN2-204ENST00000587597 MST1RQ04912 1400 aa32.08■■■□□ 2.73
RTN2-204ENST00000587597 AEBP1Q8IUX7 1158 aa32.06■■■□□ 2.72
RTN2-204ENST00000587597 USP54Q70EL1 1684 aa32.06■■■□□ 2.72
RTN2-204ENST00000587597 DDX17Q92841 729 aaKnown RBP32.06■■■□□ 2.72
RTN2-204ENST00000587597 WDR63Q8IWG1 891 aa32.05■■■□□ 2.72
RTN2-204ENST00000587597 RIPK4P57078 832 aa32.04■■■□□ 2.72
RTN2-204ENST00000587597 PLEKHG5O94827 1062 aa32.04■■■□□ 2.72
RTN2-204ENST00000587597 ERICH6Q7L0X2 663 aa32.03■■■□□ 2.72
RTN2-204ENST00000587597 SBNO1A3KN83 1393 aa32.03■■■□□ 2.72
RTN2-204ENST00000587597 AMPHP49418 695 aa32.02■■■□□ 2.72
RTN2-204ENST00000587597 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.02■■■□□ 2.72
RTN2-204ENST00000587597 PNNQ9H307 717 aaKnown RBP32.02■■■□□ 2.72
RTN2-204ENST00000587597 NCOA3Q9Y6Q9 1424 aa32.02■■■□□ 2.72
RTN2-204ENST00000587597 FLT4P35916 1363 aa32.01■■■□□ 2.71
RTN2-204ENST00000587597 SULT6B1Q6IMI4 303 aa32■■■□□ 2.71
RTN2-204ENST00000587597 KRT28Q7Z3Y7 464 aa32■■■□□ 2.71
RTN2-204ENST00000587597 DCCP43146 1447 aa31.99■■■□□ 2.71
RTN2-204ENST00000587597 CRBNQ96SW2 442 aa31.99■■■□□ 2.71
RTN2-204ENST00000587597 LMOD2Q6P5Q4 547 aa31.98■■■□□ 2.71
RTN2-204ENST00000587597 TRPM3Q9HCF6 1732 aaPredicted RBP31.98■■■□□ 2.71
RTN2-204ENST00000587597 RGPD1P0DJD0 1748 aa31.97■■■□□ 2.71
RTN2-204ENST00000587597 MSH6P52701 1360 aa31.97■■■□□ 2.71
RTN2-204ENST00000587597 KIF1AQ12756 1690 aa31.96■■■□□ 2.71
RTN2-204ENST00000587597 HOXC9P31274 260 aa31.96■■■□□ 2.71
RTN2-204ENST00000587597 CADPS2Q86UW7 1296 aa31.96■■■□□ 2.71
RTN2-204ENST00000587597 C20orf194Q5TEA3 1177 aa31.95■■■□□ 2.71
RTN2-204ENST00000587597 NFAT5O94916 1531 aa31.94■■■□□ 2.7
RTN2-204ENST00000587597 LTN1O94822 1766 aa31.94■■■□□ 2.7
RTN2-204ENST00000587597 NFE2L2Q16236 605 aa31.94■■■□□ 2.7
RTN2-204ENST00000587597 TSR2Q969E8 191 aaKnown RBP31.93■■■□□ 2.7
RTN2-204ENST00000587597 NEFMP07197 916 aa31.92■■■□□ 2.7
RTN2-204ENST00000587597 THUMPD2Q9BTF0 503 aaKnown RBP31.92■■■□□ 2.7
RTN2-204ENST00000587597 DLG5Q8TDM6 1919 aa31.91■■■□□ 2.7
RTN2-204ENST00000587597 BCAR3O75815 825 aa31.91■■■□□ 2.7
RTN2-204ENST00000587597 EYA1Q99502 592 aa31.91■■■□□ 2.7
RTN2-204ENST00000587597 MYH16Q9H6N6 1097 aa31.91■■■□□ 2.7
RTN2-204ENST00000587597 LTV1Q96GA3 475 aaPredicted RBP31.9■■■□□ 2.7
RTN2-204ENST00000587597 ZBTB7CA1YPR0 619 aa31.88■■■□□ 2.69
RTN2-204ENST00000587597 GCP02774 474 aa31.87■■■□□ 2.69
RTN2-204ENST00000587597 FAM83GA6ND36 823 aa31.86■■■□□ 2.69
RTN2-204ENST00000587597 ARHGEF10O15013 1369 aa31.84■■■□□ 2.69
RTN2-204ENST00000587597 KIF24Q5T7B8 1368 aa31.84■■■□□ 2.69
RTN2-204ENST00000587597 ALS2Q96Q42 1657 aa31.84■■■□□ 2.69
RTN2-204ENST00000587597 IGSF1Q8N6C5 1336 aa31.84■■■□□ 2.69
RTN2-204ENST00000587597 KCNH5Q8NCM2 988 aa31.84■■■□□ 2.69
RTN2-204ENST00000587597 DCTN1Q14203 1278 aa31.83■■■□□ 2.69
RTN2-204ENST00000587597 SLIT3O75094 1523 aa31.82■■■□□ 2.68
RTN2-204ENST00000587597 BRINP3Q76B58 766 aa31.82■■■□□ 2.68
RTN2-204ENST00000587597 IP6K1Q92551 441 aa31.82■■■□□ 2.68
RTN2-204ENST00000587597 USP19O94966 1318 aa31.81■■■□□ 2.68
RTN2-204ENST00000587597 KDRP35968 1356 aa31.8■■■□□ 2.68
RTN2-204ENST00000587597 IL16Q14005 1332 aa31.8■■■□□ 2.68
RTN2-204ENST00000587597 EXOSC9Q06265 439 aaKnown RBP31.79■■■□□ 2.68
RTN2-204ENST00000587597 NPHP3Q7Z494 1330 aa31.79■■■□□ 2.68
RTN2-204ENST00000587597 RARSP54136 660 aaKnown RBP31.79■■■□□ 2.68
RTN2-204ENST00000587597 ARHGEF25Q86VW2 580 aa31.79■■■□□ 2.68
RTN2-204ENST00000587597 USHBP1Q8N6Y0 703 aa31.79■■■□□ 2.68
RTN2-204ENST00000587597 LAS1LQ9Y4W2 734 aaKnown RBP31.79■■■□□ 2.68
RTN2-204ENST00000587597 RTL1A6NKG5 1358 aa31.79■■■□□ 2.68
RTN2-204ENST00000587597 MED1Q15648 1581 aaPredicted RBP31.79■■■□□ 2.68
RTN2-204ENST00000587597 SLAIN2Q9P270 581 aa31.78■■■□□ 2.68
RTN2-204ENST00000587597 PXDNQ92626 1479 aa31.77■■■□□ 2.68
RTN2-204ENST00000587597 BCL2L13Q9BXK5 485 aa31.76■■■□□ 2.68
RTN2-204ENST00000587597 CABLES1Q8TDN4 633 aa31.76■■■□□ 2.67
RTN2-204ENST00000587597 CANXP27824 592 aaKnown RBP31.75■■■□□ 2.67
RTN2-204ENST00000587597 PDE3AQ14432 1141 aa31.75■■■□□ 2.67
RTN2-204ENST00000587597 MTHFSDQ2M296 383 aaKnown RBP31.75■■■□□ 2.67
RTN2-204ENST00000587597 AXIN2Q9Y2T1 843 aa31.74■■■□□ 2.67
RTN2-204ENST00000587597 RGPD2P0DJD1 1756 aa31.74■■■□□ 2.67
RTN2-204ENST00000587597 CT47B1P0C2W7 299 aaPredicted RBP31.73■■■□□ 2.67
RTN2-204ENST00000587597 ZC3H6P61129 1189 aaKnown RBP31.73■■■□□ 2.67
RTN2-204ENST00000587597 PHRF1Q9P1Y6 1649 aaKnown RBP31.73■■■□□ 2.67
RTN2-204ENST00000587597 NBPF6Q5VWK0 638 aa31.73■■■□□ 2.67
RTN2-204ENST00000587597 NBPF4Q96M43 638 aa31.73■■■□□ 2.67
RTN2-204ENST00000587597 LRRC59Q96AG4 307 aaKnown RBP31.72■■■□□ 2.67
RTN2-204ENST00000587597 MCM10Q7L590 875 aa31.71■■■□□ 2.67
RTN2-204ENST00000587597 TNS3Q68CZ2 1445 aa31.7■■■□□ 2.66
RTN2-204ENST00000587597 SPATA31A3Q5VYP0 1347 aa31.7■■■□□ 2.66
RTN2-204ENST00000587597 ZNF853P0CG23 659 aa31.68■■■□□ 2.66
RTN2-204ENST00000587597 RGPD5Q99666 1765 aa31.68■■■□□ 2.66
RTN2-204ENST00000587597 LMOD3Q0VAK6 560 aa31.68■■■□□ 2.66
RTN2-204ENST00000587597 FRAT1Q92837 279 aaPredicted RBP31.68■■■□□ 2.66
RTN2-204ENST00000587597 MBIPQ9NS73 344 aa31.67■■■□□ 2.66
RTN2-204ENST00000587597 DEKP35659 375 aaKnown RBP31.67■■■□□ 2.66
RTN2-204ENST00000587597 IFT57Q9NWB7 429 aa31.65■■■□□ 2.66
RTN2-204ENST00000587597 TNNQ9UQP3 1299 aa31.65■■■□□ 2.66
RTN2-204ENST00000587597 KDM2BQ8NHM5 1336 aa31.64■■■□□ 2.66
RTN2-204ENST00000587597 GNAI1P63096 354 aa31.63■■■□□ 2.65
RTN2-204ENST00000587597 CFAP44Q96MT7 982 aa31.63■■■□□ 2.65
RTN2-204ENST00000587597 CALD1Q05682 793 aaKnown RBP31.63■■■□□ 2.65
RTN2-204ENST00000587597 TSPYL6Q8N831 410 aa31.62■■■□□ 2.65
RTN2-204ENST00000587597 PANK1Q8TE04 598 aa31.62■■■□□ 2.65
RTN2-204ENST00000587597 ANKRD24Q8TF21 1146 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms