RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 MSNP26038 577 aaKnown RBP20.39■□□□□ 0.85
RANBP3-209ENST00000587411 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
RANBP3-209ENST00000587411 CALD1Q05682 793 aaKnown RBP20.38■□□□□ 0.85
RANBP3-209ENST00000587411 RBM42Q9BTD8 480 aaKnown RBP20.38■□□□□ 0.85
RANBP3-209ENST00000587411 FYB1O15117 783 aa20.37■□□□□ 0.85
RANBP3-209ENST00000587411 MRPL50Q8N5N7 158 aaKnown RBP20.37■□□□□ 0.85
RANBP3-209ENST00000587411 CAMSAP1Q5T5Y3 1602 aa20.36■□□□□ 0.85
RANBP3-209ENST00000587411 HECW2Q9P2P5 1572 aa20.35■□□□□ 0.85
RANBP3-209ENST00000587411 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
RANBP3-209ENST00000587411 ABCC4O15439 1325 aa20.35■□□□□ 0.85
RANBP3-209ENST00000587411 NEXMIFQ5QGS0 1516 aa20.35■□□□□ 0.85
RANBP3-209ENST00000587411 FAM135BQ49AJ0 1406 aa20.34■□□□□ 0.85
RANBP3-209ENST00000587411 LRRC7Q96NW7 1537 aa20.34■□□□□ 0.85
RANBP3-209ENST00000587411 VAMP4O75379 141 aa20.34■□□□□ 0.85
RANBP3-209ENST00000587411 PIK3C2BO00750 1634 aa20.34■□□□□ 0.85
RANBP3-209ENST00000587411 SIRT2Q8IXJ6 389 aa20.33■□□□□ 0.85
RANBP3-209ENST00000587411 CYP2E1P05181 493 aaPredicted RBP20.33■□□□□ 0.84
RANBP3-209ENST00000587411 C1orf115Q9H7X2 142 aa20.33■□□□□ 0.84
RANBP3-209ENST00000587411 CWC22Q9HCG8 908 aaKnown RBP20.33■□□□□ 0.84
RANBP3-209ENST00000587411 KIF24Q5T7B8 1368 aa20.32■□□□□ 0.84
RANBP3-209ENST00000587411 ABCC3O15438 1527 aa20.32■□□□□ 0.84
RANBP3-209ENST00000587411 MCTP1Q6DN14 999 aa20.31■□□□□ 0.84
RANBP3-209ENST00000587411 ZSCAN23Q3MJ62 389 aa20.31■□□□□ 0.84
RANBP3-209ENST00000587411 CD163L1Q9NR16 1453 aa20.31■□□□□ 0.84
RANBP3-209ENST00000587411 GNAI1P63096 354 aa20.3■□□□□ 0.84
RANBP3-209ENST00000587411 LMBRD1Q9NUN5 540 aa20.3■□□□□ 0.84
RANBP3-209ENST00000587411 GSPT1P15170 499 aaKnown RBP20.3■□□□□ 0.84
RANBP3-209ENST00000587411 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
RANBP3-209ENST00000587411 NFE2L2Q16236 605 aa20.3■□□□□ 0.84
RANBP3-209ENST00000587411 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
RANBP3-209ENST00000587411 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
RANBP3-209ENST00000587411 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
RANBP3-209ENST00000587411 PDLIM2Q96JY6 352 aa20.3■□□□□ 0.84
RANBP3-209ENST00000587411 NOL7Q9UMY1 257 aaKnown RBP20.3■□□□□ 0.84
RANBP3-209ENST00000587411 CLTCQ00610 1675 aaKnown RBP20.29■□□□□ 0.84
RANBP3-209ENST00000587411 FRMPD1Q5SYB0 1578 aa20.29■□□□□ 0.84
RANBP3-209ENST00000587411 ZNF500O60304 480 aaPredicted RBP20.29■□□□□ 0.84
RANBP3-209ENST00000587411 CAVIN1Q6NZI2 390 aaKnown RBP20.29■□□□□ 0.84
RANBP3-209ENST00000587411 PLEKHM2Q8IWE5 1019 aa20.29■□□□□ 0.84
RANBP3-209ENST00000587411 SAFB2Q14151 953 aaKnown RBP eCLIP20.29■□□□□ 0.84
RANBP3-209ENST00000587411 TTC22Q5TAA0 569 aa20.28■□□□□ 0.84
RANBP3-209ENST00000587411 INTS3Q68E01 1043 aaKnown RBP20.28■□□□□ 0.84
RANBP3-209ENST00000587411 GGT6Q6P531 493 aa20.28■□□□□ 0.84
RANBP3-209ENST00000587411 MAP7D2Q96T17 732 aa20.28■□□□□ 0.84
RANBP3-209ENST00000587411 USP26Q9BXU7 913 aa20.28■□□□□ 0.84
RANBP3-209ENST00000587411 ASXL2Q76L83 1435 aa20.27■□□□□ 0.84
RANBP3-209ENST00000587411 MLH3Q9UHC1 1453 aa20.27■□□□□ 0.83
RANBP3-209ENST00000587411 NCLP19338 710 aaKnown RBP20.27■□□□□ 0.83
RANBP3-209ENST00000587411 YEATS2Q9ULM3 1422 aa20.27■□□□□ 0.83
RANBP3-209ENST00000587411 DCTPP1Q9H773 170 aa20.26■□□□□ 0.83
RANBP3-209ENST00000587411 PTPRMP28827 1452 aa20.26■□□□□ 0.83
RANBP3-209ENST00000587411 ST18O60284 1047 aa20.26■□□□□ 0.83
RANBP3-209ENST00000587411 MCM5P33992 734 aa20.26■□□□□ 0.83
RANBP3-209ENST00000587411 ZNF853P0CG23 659 aa20.25■□□□□ 0.83
RANBP3-209ENST00000587411 CASC1Q6TDU7 716 aa20.25■□□□□ 0.83
RANBP3-209ENST00000587411 NUTM2DQ5VT03 806 aaPredicted RBP20.25■□□□□ 0.83
RANBP3-209ENST00000587411 TSPYL6Q8N831 410 aa20.25■□□□□ 0.83
RANBP3-209ENST00000587411 RBSNQ9H1K0 784 aa20.25■□□□□ 0.83
RANBP3-209ENST00000587411 KIF20BQ96Q89 1820 aa20.24■□□□□ 0.83
RANBP3-209ENST00000587411 POGZQ7Z3K3 1410 aa20.24■□□□□ 0.83
RANBP3-209ENST00000587411 TWISTNBQ3B726 338 aaPredicted RBP20.23■□□□□ 0.83
RANBP3-209ENST00000587411 CFAP65Q6ZU64 1925 aaKnown RBP20.23■□□□□ 0.83
RANBP3-209ENST00000587411 CSPP1Q1MSJ5 1256 aa20.23■□□□□ 0.83
RANBP3-209ENST00000587411 MBIPQ9NS73 344 aa20.23■□□□□ 0.83
RANBP3-209ENST00000587411 LMOD3Q0VAK6 560 aa20.22■□□□□ 0.83
RANBP3-209ENST00000587411 STK26Q9P289 416 aa20.22■□□□□ 0.83
RANBP3-209ENST00000587411 PRIM1P49642 420 aaKnown RBP20.21■□□□□ 0.83
RANBP3-209ENST00000587411 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
RANBP3-209ENST00000587411 SIGLEC1Q9BZZ2 1709 aa20.21■□□□□ 0.83
RANBP3-209ENST00000587411 ZKSCAN5Q9Y2L8 839 aa20.21■□□□□ 0.83
RANBP3-209ENST00000587411 PHACTR3Q96KR7 559 aa20.2■□□□□ 0.82
RANBP3-209ENST00000587411 POLKQ9UBT6 870 aa20.2■□□□□ 0.82
RANBP3-209ENST00000587411 PRPF40AO75400 957 aaKnown RBP20.2■□□□□ 0.82
RANBP3-209ENST00000587411 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
RANBP3-209ENST00000587411 REC8O95072 547 aa20.2■□□□□ 0.82
RANBP3-209ENST00000587411 LRSAM1Q6UWE0 723 aa20.2■□□□□ 0.82
RANBP3-209ENST00000587411 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
RANBP3-209ENST00000587411 THUMPD2Q9BTF0 503 aaKnown RBP20.2■□□□□ 0.82
RANBP3-209ENST00000587411 YTHDC2Q9H6S0 1430 aaKnown RBP20.19■□□□□ 0.82
RANBP3-209ENST00000587411 ANKRD44Q8N8A2 993 aa20.19■□□□□ 0.82
RANBP3-209ENST00000587411 GPT2Q8TD30 523 aa20.19■□□□□ 0.82
RANBP3-209ENST00000587411 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.19■□□□□ 0.82
RANBP3-209ENST00000587411 CCDC39Q9UFE4 941 aa20.19■□□□□ 0.82
RANBP3-209ENST00000587411 PKP1Q13835 747 aa20.19■□□□□ 0.82
RANBP3-209ENST00000587411 RPAP2Q8IXW5 612 aaPredicted RBP20.18■□□□□ 0.82
RANBP3-209ENST00000587411 KNDC1Q76NI1 1749 aa20.18■□□□□ 0.82
RANBP3-209ENST00000587411 MBD3O95983 291 aa20.18■□□□□ 0.82
RANBP3-209ENST00000587411 MTERF4Q7Z6M4 381 aaKnown RBP20.18■□□□□ 0.82
RANBP3-209ENST00000587411 ELL2O00472 640 aaPredicted RBP20.17■□□□□ 0.82
RANBP3-209ENST00000587411 SDSP20132 328 aa20.17■□□□□ 0.82
RANBP3-209ENST00000587411 SLC52A1Q9NWF4 448 aa20.17■□□□□ 0.82
RANBP3-209ENST00000587411 ARHGEF40Q8TER5 1519 aa20.16■□□□□ 0.82
RANBP3-209ENST00000587411 HMOX1P09601 288 aa20.16■□□□□ 0.82
RANBP3-209ENST00000587411 ZDHHC9Q9Y397 364 aa20.16■□□□□ 0.82
RANBP3-209ENST00000587411 ATP10DQ9P241 1426 aa20.16■□□□□ 0.82
RANBP3-209ENST00000587411 ZGPATQ8N5A5 531 aaKnown RBP20.16■□□□□ 0.82
RANBP3-209ENST00000587411 C8orf58Q8NAV2 365 aa20.16■□□□□ 0.82
RANBP3-209ENST00000587411 HAP1P54257 671 aaPredicted RBP20.15■□□□□ 0.82
RANBP3-209ENST00000587411 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
RANBP3-209ENST00000587411 CABP1Q9NZU7 370 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms