RNA–Protein interactions for RNA: ENST00000586057.5

TIMP2-204, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best) BASIC

Gene TIMP2, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-204ENST00000586057 MED14O60244 1454 aa12.96□□□□□ -0.33
TIMP2-204ENST00000586057 BLMP54132 1417 aaPredicted RBP12.96□□□□□ -0.33
TIMP2-204ENST00000586057 SMAP1Q8IYB5 467 aaPredicted RBP12.96□□□□□ -0.33
TIMP2-204ENST00000586057 FOXO3O43524 673 aa12.95□□□□□ -0.34
TIMP2-204ENST00000586057 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
TIMP2-204ENST00000586057 GRPEL1Q9HAV7 217 aa12.95□□□□□ -0.34
TIMP2-204ENST00000586057 NPHP4O75161 1426 aaPredicted RBP12.95□□□□□ -0.34
TIMP2-204ENST00000586057 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
TIMP2-204ENST00000586057 ATP7BP35670 1465 aa12.95□□□□□ -0.34
TIMP2-204ENST00000586057 PSME1Q06323 249 aa12.95□□□□□ -0.34
TIMP2-204ENST00000586057 ANTXR1Q9H6X2 564 aa12.95□□□□□ -0.34
TIMP2-204ENST00000586057 PLEKHG3A1L390 1219 aa12.95□□□□□ -0.34
TIMP2-204ENST00000586057 LTV1Q96GA3 475 aaPredicted RBP12.95□□□□□ -0.34
TIMP2-204ENST00000586057 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
TIMP2-204ENST00000586057 ADAMTSL3P82987 1691 aa12.94□□□□□ -0.34
TIMP2-204ENST00000586057 WWC1Q8IX03 1113 aa12.94□□□□□ -0.34
TIMP2-204ENST00000586057 EDC4Q6P2E9 1401 aaKnown RBP12.94□□□□□ -0.34
TIMP2-204ENST00000586057 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.94□□□□□ -0.34
TIMP2-204ENST00000586057 MCM4P33991 863 aa12.94□□□□□ -0.34
TIMP2-204ENST00000586057 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
TIMP2-204ENST00000586057 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
TIMP2-204ENST00000586057 CPSF1Q10570 1443 aaKnown RBP12.94□□□□□ -0.34
TIMP2-204ENST00000586057 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
TIMP2-204ENST00000586057 PRKAR2BP31323 418 aa12.94□□□□□ -0.34
TIMP2-204ENST00000586057 CPS1P31327 1500 aa12.93□□□□□ -0.34
TIMP2-204ENST00000586057 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
TIMP2-204ENST00000586057 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
TIMP2-204ENST00000586057 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
TIMP2-204ENST00000586057 TRAK2O60296 914 aa12.92□□□□□ -0.34
TIMP2-204ENST00000586057 FAM13BQ9NYF5 915 aa12.92□□□□□ -0.34
TIMP2-204ENST00000586057 USP19O94966 1318 aa12.92□□□□□ -0.34
TIMP2-204ENST00000586057 AMPHP49418 695 aa12.92□□□□□ -0.34
TIMP2-204ENST00000586057 RIPK4P57078 832 aa12.92□□□□□ -0.34
TIMP2-204ENST00000586057 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
TIMP2-204ENST00000586057 SLFN5Q08AF3 891 aa12.91□□□□□ -0.34
TIMP2-204ENST00000586057 C20orf194Q5TEA3 1177 aa12.91□□□□□ -0.34
TIMP2-204ENST00000586057 DDX17Q92841 729 aaKnown RBP12.91□□□□□ -0.34
TIMP2-204ENST00000586057 TERF1P54274 439 aa12.9□□□□□ -0.34
TIMP2-204ENST00000586057 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
TIMP2-204ENST00000586057 ZHX1Q9UKY1 873 aaPredicted RBP12.9□□□□□ -0.34
TIMP2-204ENST00000586057 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
TIMP2-204ENST00000586057 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
TIMP2-204ENST00000586057 THUMPD2Q9BTF0 503 aaKnown RBP12.9□□□□□ -0.34
TIMP2-204ENST00000586057 PTCH1Q13635 1447 aa12.9□□□□□ -0.35
TIMP2-204ENST00000586057 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.89□□□□□ -0.35
TIMP2-204ENST00000586057 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
TIMP2-204ENST00000586057 OFD1O75665 1012 aa12.89□□□□□ -0.35
TIMP2-204ENST00000586057 TMPOP42166 694 aaKnown RBP12.89□□□□□ -0.35
TIMP2-204ENST00000586057 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
TIMP2-204ENST00000586057 USP6P35125 1406 aa12.89□□□□□ -0.35
TIMP2-204ENST00000586057 E9PSI1 815 aa12.89□□□□□ -0.35
TIMP2-204ENST00000586057 CANXP27824 592 aaKnown RBP12.89□□□□□ -0.35
TIMP2-204ENST00000586057 SULT6B1Q6IMI4 303 aa12.89□□□□□ -0.35
TIMP2-204ENST00000586057 BCAR3O75815 825 aa12.88□□□□□ -0.35
TIMP2-204ENST00000586057 ATF3P18847 181 aa12.88□□□□□ -0.35
TIMP2-204ENST00000586057 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
TIMP2-204ENST00000586057 PIK3R4Q99570 1358 aa12.88□□□□□ -0.35
TIMP2-204ENST00000586057 ZNF521Q96K83 1311 aa12.87□□□□□ -0.35
TIMP2-204ENST00000586057 DIP2AQ14689 1571 aa12.87□□□□□ -0.35
TIMP2-204ENST00000586057 IL13P35225 146 aa12.86□□□□□ -0.35
TIMP2-204ENST00000586057 EIF4A2Q14240 407 aaKnown RBP12.86□□□□□ -0.35
TIMP2-204ENST00000586057 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
TIMP2-204ENST00000586057 MAP3K19Q56UN5 1328 aa12.86□□□□□ -0.35
TIMP2-204ENST00000586057 GTF2E1P29083 439 aaPredicted RBP12.86□□□□□ -0.35
TIMP2-204ENST00000586057 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
TIMP2-204ENST00000586057 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
TIMP2-204ENST00000586057 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
TIMP2-204ENST00000586057 FCHSD2O94868 740 aa12.85□□□□□ -0.35
TIMP2-204ENST00000586057 PLEKHF1Q96S99 279 aa12.85□□□□□ -0.35
TIMP2-204ENST00000586057 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
TIMP2-204ENST00000586057 ZSCAN30Q86W11 494 aa12.85□□□□□ -0.35
TIMP2-204ENST00000586057 UPF2Q9HAU5 1272 aaKnown RBP12.85□□□□□ -0.35
TIMP2-204ENST00000586057 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
TIMP2-204ENST00000586057 TBC1D2Q9BYX2 928 aa12.84□□□□□ -0.35
TIMP2-204ENST00000586057 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
TIMP2-204ENST00000586057 TMEM94Q12767 1356 aa12.84□□□□□ -0.35
TIMP2-204ENST00000586057 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
TIMP2-204ENST00000586057 SEC24BO95487 1268 aa12.84□□□□□ -0.35
TIMP2-204ENST00000586057 MSNP26038 577 aaKnown RBP12.84□□□□□ -0.35
TIMP2-204ENST00000586057 INSRP06213 1382 aa12.84□□□□□ -0.35
TIMP2-204ENST00000586057 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
TIMP2-204ENST00000586057 PRDM10Q9NQV6 1147 aa12.84□□□□□ -0.35
TIMP2-204ENST00000586057 USP32Q8NFA0 1604 aa12.83□□□□□ -0.35
TIMP2-204ENST00000586057 USHBP1Q8N6Y0 703 aa12.83□□□□□ -0.36
TIMP2-204ENST00000586057 CHMP5Q9NZZ3 219 aa12.83□□□□□ -0.36
TIMP2-204ENST00000586057 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.36
TIMP2-204ENST00000586057 DMTNQ08495 405 aa12.83□□□□□ -0.36
TIMP2-204ENST00000586057 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.83□□□□□ -0.36
TIMP2-204ENST00000586057 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
TIMP2-204ENST00000586057 R3HCC1Q9Y3T6 440 aaKnown RBP12.83□□□□□ -0.36
TIMP2-204ENST00000586057 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
TIMP2-204ENST00000586057 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
TIMP2-204ENST00000586057 ARID3AQ99856 593 aa12.82□□□□□ -0.36
TIMP2-204ENST00000586057 SPRYD3Q8NCJ5 442 aa12.82□□□□□ -0.36
TIMP2-204ENST00000586057 RGPD8O14715 1765 aaPredicted RBP12.82□□□□□ -0.36
TIMP2-204ENST00000586057 EXOSC9Q06265 439 aaKnown RBP12.81□□□□□ -0.36
TIMP2-204ENST00000586057 CCDC173Q0VFZ6 552 aa12.81□□□□□ -0.36
TIMP2-204ENST00000586057 ZNF335Q9H4Z2 1342 aaPredicted RBP12.81□□□□□ -0.36
TIMP2-204ENST00000586057 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
TIMP2-204ENST00000586057 ADGRL3Q9HAR2 1447 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms