RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 KCNH5Q8NCM2 988 aa19.54■□□□□ 0.72
CDK5RAP3-236ENST00000584991 RUNDC1Q96C34 613 aa19.54■□□□□ 0.72
CDK5RAP3-236ENST00000584991 SLIT3O75094 1523 aa19.54■□□□□ 0.72
CDK5RAP3-236ENST00000584991 TNS3Q68CZ2 1445 aa19.54■□□□□ 0.72
CDK5RAP3-236ENST00000584991 FLT4P35916 1363 aa19.53■□□□□ 0.72
CDK5RAP3-236ENST00000584991 TCERG1O14776 1098 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-236ENST00000584991 GCP02774 474 aa19.53■□□□□ 0.72
CDK5RAP3-236ENST00000584991 USP19O94966 1318 aa19.53■□□□□ 0.72
CDK5RAP3-236ENST00000584991 SPATA31A3Q5VYP0 1347 aa19.53■□□□□ 0.72
CDK5RAP3-236ENST00000584991 EIF4A2Q14240 407 aaKnown RBP19.52■□□□□ 0.72
CDK5RAP3-236ENST00000584991 SOS2Q07890 1332 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-236ENST00000584991 NHSL1Q5SYE7 1610 aa19.51■□□□□ 0.71
CDK5RAP3-236ENST00000584991 MED1Q15648 1581 aaPredicted RBP19.5■□□□□ 0.71
CDK5RAP3-236ENST00000584991 KIF24Q5T7B8 1368 aa19.5■□□□□ 0.71
CDK5RAP3-236ENST00000584991 MS4A1P11836 297 aa19.5■□□□□ 0.71
CDK5RAP3-236ENST00000584991 HOXC9P31274 260 aa19.5■□□□□ 0.71
CDK5RAP3-236ENST00000584991 ZBTB7CA1YPR0 619 aa19.5■□□□□ 0.71
CDK5RAP3-236ENST00000584991 NGEFQ8N5V2 710 aa19.5■□□□□ 0.71
CDK5RAP3-236ENST00000584991 FCHSD2O94868 740 aa19.49■□□□□ 0.71
CDK5RAP3-236ENST00000584991 HMOX1P09601 288 aa19.49■□□□□ 0.71
CDK5RAP3-236ENST00000584991 ANP32AP39687 249 aaKnown RBP19.49■□□□□ 0.71
CDK5RAP3-236ENST00000584991 TCP11L2Q8N4U5 519 aa19.49■□□□□ 0.71
CDK5RAP3-236ENST00000584991 PLEKHF1Q96S99 279 aa19.49■□□□□ 0.71
CDK5RAP3-236ENST00000584991 ROBO1Q9Y6N7 1651 aa19.49■□□□□ 0.71
CDK5RAP3-236ENST00000584991 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
CDK5RAP3-236ENST00000584991 RSPH6AQ9H0K4 717 aa19.48■□□□□ 0.71
CDK5RAP3-236ENST00000584991 PNNQ9H307 717 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP3-236ENST00000584991 IQSEC2Q5JU85 1478 aa19.47■□□□□ 0.71
CDK5RAP3-236ENST00000584991 RTL1A6NKG5 1358 aa19.47■□□□□ 0.71
CDK5RAP3-236ENST00000584991 PHRF1Q9P1Y6 1649 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP3-236ENST00000584991 EXOC6Q8TAG9 804 aa19.47■□□□□ 0.71
CDK5RAP3-236ENST00000584991 CABLES1Q8TDN4 633 aa19.47■□□□□ 0.71
CDK5RAP3-236ENST00000584991 RRP7AQ9Y3A4 280 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP3-236ENST00000584991 NEUROD2Q15784 382 aa19.46■□□□□ 0.71
CDK5RAP3-236ENST00000584991 ARHGEF25Q86VW2 580 aa19.46■□□□□ 0.71
CDK5RAP3-236ENST00000584991 IP6K1Q92551 441 aa19.46■□□□□ 0.71
CDK5RAP3-236ENST00000584991 NOP58Q9Y2X3 529 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP3-236ENST00000584991 MAPK8IP3Q9UPT6 1336 aa19.46■□□□□ 0.71
CDK5RAP3-236ENST00000584991 RGPD1P0DJD0 1748 aa19.46■□□□□ 0.71
CDK5RAP3-236ENST00000584991 PRKAR2BP31323 418 aa19.45■□□□□ 0.7
CDK5RAP3-236ENST00000584991 CRYBG1Q9Y4K1 1723 aa19.45■□□□□ 0.7
CDK5RAP3-236ENST00000584991 ZC3H6P61129 1189 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP3-236ENST00000584991 LTV1Q96GA3 475 aaPredicted RBP19.44■□□□□ 0.7
CDK5RAP3-236ENST00000584991 IPO9Q96P70 1041 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP3-236ENST00000584991 ZNF521Q96K83 1311 aa19.44■□□□□ 0.7
CDK5RAP3-236ENST00000584991 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
CDK5RAP3-236ENST00000584991 SULT6B1Q6IMI4 303 aa19.43■□□□□ 0.7
CDK5RAP3-236ENST00000584991 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
CDK5RAP3-236ENST00000584991 TOM1O60784 492 aa19.41■□□□□ 0.7
CDK5RAP3-236ENST00000584991 NEFMP07197 916 aa19.41■□□□□ 0.7
CDK5RAP3-236ENST00000584991 EYA1Q99502 592 aa19.41■□□□□ 0.7
CDK5RAP3-236ENST00000584991 TMPOP42166 694 aaKnown RBP19.41■□□□□ 0.7
CDK5RAP3-236ENST00000584991 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
CDK5RAP3-236ENST00000584991 RGPD5Q99666 1765 aa19.41■□□□□ 0.7
CDK5RAP3-236ENST00000584991 AHDC1Q5TGY3 1603 aaPredicted RBP19.4■□□□□ 0.7
CDK5RAP3-236ENST00000584991 WWC1Q8IX03 1113 aa19.4■□□□□ 0.7
CDK5RAP3-236ENST00000584991 GOLGA2Q08379 1002 aa19.39■□□□□ 0.7
CDK5RAP3-236ENST00000584991 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.39■□□□□ 0.7
CDK5RAP3-236ENST00000584991 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.69
CDK5RAP3-236ENST00000584991 PIP4K2BP78356 416 aa19.38■□□□□ 0.69
CDK5RAP3-236ENST00000584991 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
CDK5RAP3-236ENST00000584991 AXIN2Q9Y2T1 843 aa19.38■□□□□ 0.69
CDK5RAP3-236ENST00000584991 CCDC27Q2M243 656 aa19.37■□□□□ 0.69
CDK5RAP3-236ENST00000584991 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-236ENST00000584991 RGPD2P0DJD1 1756 aa19.37■□□□□ 0.69
CDK5RAP3-236ENST00000584991 ABCA3Q99758 1704 aa19.37■□□□□ 0.69
CDK5RAP3-236ENST00000584991 RIPK4P57078 832 aa19.37■□□□□ 0.69
CDK5RAP3-236ENST00000584991 LRRC59Q96AG4 307 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-236ENST00000584991 COL18A1P39060 1754 aa19.36■□□□□ 0.69
CDK5RAP3-236ENST00000584991 UBAP1LF5GYI3 381 aa19.36■□□□□ 0.69
CDK5RAP3-236ENST00000584991 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
CDK5RAP3-236ENST00000584991 DUSP27Q5VZP5 1158 aa19.36■□□□□ 0.69
CDK5RAP3-236ENST00000584991 TRMT2AQ8IZ69 625 aaKnown RBP19.36■□□□□ 0.69
CDK5RAP3-236ENST00000584991 KIAA0232Q92628 1395 aa19.36■□□□□ 0.69
CDK5RAP3-236ENST00000584991 NFE2L2Q16236 605 aa19.35■□□□□ 0.69
CDK5RAP3-236ENST00000584991 ANKRD24Q8TF21 1146 aa19.35■□□□□ 0.69
CDK5RAP3-236ENST00000584991 ZBTB47Q9UFB7 747 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-236ENST00000584991 KDRP35968 1356 aa19.35■□□□□ 0.69
CDK5RAP3-236ENST00000584991 PHLPP1O60346 1717 aa19.35■□□□□ 0.69
CDK5RAP3-236ENST00000584991 CHRNA2Q15822 529 aa19.35■□□□□ 0.69
CDK5RAP3-236ENST00000584991 SPINK5Q9NQ38 1064 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-236ENST00000584991 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
CDK5RAP3-236ENST00000584991 CPDO75976 1380 aa19.35■□□□□ 0.69
CDK5RAP3-236ENST00000584991 DLG5Q8TDM6 1919 aa19.34■□□□□ 0.69
CDK5RAP3-236ENST00000584991 SLFN5Q08AF3 891 aa19.34■□□□□ 0.69
CDK5RAP3-236ENST00000584991 NBPF6Q5VWK0 638 aa19.34■□□□□ 0.69
CDK5RAP3-236ENST00000584991 USHBP1Q8N6Y0 703 aa19.34■□□□□ 0.69
CDK5RAP3-236ENST00000584991 NBPF4Q96M43 638 aa19.34■□□□□ 0.69
CDK5RAP3-236ENST00000584991 BACH2Q9BYV9 841 aa19.34■□□□□ 0.69
CDK5RAP3-236ENST00000584991 PDE4AP27815 886 aa19.33■□□□□ 0.68
CDK5RAP3-236ENST00000584991 WDR63Q8IWG1 891 aa19.33■□□□□ 0.68
CDK5RAP3-236ENST00000584991 CERKQ8TCT0 537 aa19.32■□□□□ 0.68
CDK5RAP3-236ENST00000584991 E9PSI1 815 aa19.31■□□□□ 0.68
CDK5RAP3-236ENST00000584991 COL16A1Q07092 1604 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-236ENST00000584991 ABCC6O95255 1503 aa19.31■□□□□ 0.68
CDK5RAP3-236ENST00000584991 CRBNQ96SW2 442 aa19.31■□□□□ 0.68
CDK5RAP3-236ENST00000584991 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
CDK5RAP3-236ENST00000584991 ERBB3P21860 1342 aa19.3■□□□□ 0.68
CDK5RAP3-236ENST00000584991 CENPQQ7L2Z9 268 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-236ENST00000584991 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms