RNA–Protein interactions for RNA: ENST00000584580.1

LRRC46-204, Transcript of leucine rich repeat containing 46, humanhuman

TSL 2

Gene LRRC46, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46-204ENST00000584580 NEFMP07197 916 aa15.18■□□□□ 0.02
LRRC46-204ENST00000584580 RIPK4P57078 832 aa15.18■□□□□ 0.02
LRRC46-204ENST00000584580 AEBP1Q8IUX7 1158 aa15.18■□□□□ 0.02
LRRC46-204ENST00000584580 FLT4P35916 1363 aa15.18■□□□□ 0.02
LRRC46-204ENST00000584580 CCDC27Q2M243 656 aa15.17■□□□□ 0.02
LRRC46-204ENST00000584580 SULT6B1Q6IMI4 303 aa15.17■□□□□ 0.02
LRRC46-204ENST00000584580 TRMT2AQ8IZ69 625 aaKnown RBP15.17■□□□□ 0.02
LRRC46-204ENST00000584580 MARF1Q9Y4F3 1742 aaKnown RBP15.17■□□□□ 0.02
LRRC46-204ENST00000584580 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
LRRC46-204ENST00000584580 RNF123Q5XPI4 1314 aa15.16■□□□□ 0.02
LRRC46-204ENST00000584580 XIRP1Q702N8 1843 aaKnown RBP15.16■□□□□ 0.02
LRRC46-204ENST00000584580 HOXC9P31274 260 aa15.16■□□□□ 0.02
LRRC46-204ENST00000584580 WDR63Q8IWG1 891 aa15.16■□□□□ 0.02
LRRC46-204ENST00000584580 LTV1Q96GA3 475 aaPredicted RBP15.15■□□□□ 0.02
LRRC46-204ENST00000584580 KIF1AQ12756 1690 aa15.15■□□□□ 0.02
LRRC46-204ENST00000584580 RRP1P56182 461 aaKnown RBP15.14■□□□□ 0.01
LRRC46-204ENST00000584580 KCNH5Q8NCM2 988 aa15.14■□□□□ 0.01
LRRC46-204ENST00000584580 GCP02774 474 aa15.13■□□□□ 0.01
LRRC46-204ENST00000584580 BRINP3Q76B58 766 aa15.13■□□□□ 0.01
LRRC46-204ENST00000584580 SLAIN2Q9P270 581 aa15.13■□□□□ 0.01
LRRC46-204ENST00000584580 NFE2L2Q16236 605 aa15.13■□□□□ 0.01
LRRC46-204ENST00000584580 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
LRRC46-204ENST00000584580 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
LRRC46-204ENST00000584580 USP54Q70EL1 1684 aa15.12■□□□□ 0.01
LRRC46-204ENST00000584580 PLIN1O60240 522 aa15.12■□□□□ 0.01
LRRC46-204ENST00000584580 EYA1Q99502 592 aa15.12■□□□□ 0.01
LRRC46-204ENST00000584580 TRPM3Q9HCF6 1732 aaPredicted RBP15.11■□□□□ 0.01
LRRC46-204ENST00000584580 NFAT5O94916 1531 aa15.11■□□□□ 0.01
LRRC46-204ENST00000584580 IP6K1Q92551 441 aa15.1■□□□□ 0.01
LRRC46-204ENST00000584580 TSR2Q969E8 191 aaKnown RBP15.1■□□□□ 0.01
LRRC46-204ENST00000584580 THUMPD2Q9BTF0 503 aaKnown RBP15.1■□□□□ 0.01
LRRC46-204ENST00000584580 KIF24Q5T7B8 1368 aa15.1■□□□□ 0.01
LRRC46-204ENST00000584580 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
LRRC46-204ENST00000584580 USP19O94966 1318 aa15.09■□□□□ 0.01
LRRC46-204ENST00000584580 ARHGEF10O15013 1369 aa15.09■□□□□ 0.01
LRRC46-204ENST00000584580 CABLES1Q8TDN4 633 aa15.09■□□□□ 0.01
LRRC46-204ENST00000584580 ZC3H6P61129 1189 aaKnown RBP15.08■□□□□ 0
LRRC46-204ENST00000584580 ARHGEF25Q86VW2 580 aa15.08■□□□□ 0
LRRC46-204ENST00000584580 IGSF1Q8N6C5 1336 aa15.08■□□□□ 0
LRRC46-204ENST00000584580 FAM83GA6ND36 823 aa15.08■□□□□ 0
LRRC46-204ENST00000584580 USHBP1Q8N6Y0 703 aa15.08■□□□□ 0
LRRC46-204ENST00000584580 LAS1LQ9Y4W2 734 aaKnown RBP15.08■□□□□ 0
LRRC46-204ENST00000584580 RTL1A6NKG5 1358 aa15.07■□□□□ 0
LRRC46-204ENST00000584580 RGPD1P0DJD0 1748 aa15.07■□□□□ 0
LRRC46-204ENST00000584580 SLIT3O75094 1523 aa15.07■□□□□ 0
LRRC46-204ENST00000584580 LTN1O94822 1766 aa15.07■□□□□ 0
LRRC46-204ENST00000584580 BCAR3O75815 825 aa15.07■□□□□ 0
LRRC46-204ENST00000584580 DCTN1Q14203 1278 aa15.07■□□□□ 0
LRRC46-204ENST00000584580 ERICH6BQ5W0A0 696 aa15.07■□□□□ 0
LRRC46-204ENST00000584580 FANCIQ9NVI1 1328 aa15.06■□□□□ 0
LRRC46-204ENST00000584580 PXDNQ92626 1479 aa15.06■□□□□ 0
LRRC46-204ENST00000584580 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
LRRC46-204ENST00000584580 TNS3Q68CZ2 1445 aa15.06■□□□□ 0
LRRC46-204ENST00000584580 ALS2Q96Q42 1657 aa15.05■□□□□ 0
LRRC46-204ENST00000584580 MED1Q15648 1581 aaPredicted RBP15.05■□□□□ -0
LRRC46-204ENST00000584580 IL16Q14005 1332 aa15.05■□□□□ -0
LRRC46-204ENST00000584580 PPP4R2Q9NY27 417 aa15.05■□□□□ -0
LRRC46-204ENST00000584580 KDRP35968 1356 aa15.04■□□□□ -0
LRRC46-204ENST00000584580 LRRC59Q96AG4 307 aaKnown RBP15.04■□□□□ -0
LRRC46-204ENST00000584580 AXIN2Q9Y2T1 843 aa15.04■□□□□ -0
LRRC46-204ENST00000584580 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
LRRC46-204ENST00000584580 LMOD3Q0VAK6 560 aa15.04■□□□□ -0
LRRC46-204ENST00000584580 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
LRRC46-204ENST00000584580 C20orf194Q5TEA3 1177 aa15.04■□□□□ -0
LRRC46-204ENST00000584580 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
LRRC46-204ENST00000584580 NBPF4Q96M43 638 aa15.04■□□□□ -0
LRRC46-204ENST00000584580 B4GALNT3Q6L9W6 998 aa15.03■□□□□ -0
LRRC46-204ENST00000584580 EXOC6Q8TAG9 804 aa15.03■□□□□ -0
LRRC46-204ENST00000584580 MCM10Q7L590 875 aa15.02■□□□□ -0
LRRC46-204ENST00000584580 ANKRD24Q8TF21 1146 aa15.02■□□□□ -0
LRRC46-204ENST00000584580 BCL2L13Q9BXK5 485 aa15.02□□□□□ -0.01
LRRC46-204ENST00000584580 SOS2Q07890 1332 aaPredicted RBP15.01□□□□□ -0.01
LRRC46-204ENST00000584580 RARSP54136 660 aaKnown RBP15.01□□□□□ -0.01
LRRC46-204ENST00000584580 CALD1Q05682 793 aaKnown RBP15.01□□□□□ -0.01
LRRC46-204ENST00000584580 CHRNA2Q15822 529 aa15.01□□□□□ -0.01
LRRC46-204ENST00000584580 GOLGA6L2Q8N9W4 650 aaPredicted RBP15□□□□□ -0.01
LRRC46-204ENST00000584580 CRBNQ96SW2 442 aa15□□□□□ -0.01
LRRC46-204ENST00000584580 GNAI1P63096 354 aa14.99□□□□□ -0.01
LRRC46-204ENST00000584580 FRAT1Q92837 279 aaPredicted RBP14.99□□□□□ -0.01
LRRC46-204ENST00000584580 IFT57Q9NWB7 429 aa14.99□□□□□ -0.01
LRRC46-204ENST00000584580 DLG5Q8TDM6 1919 aa14.99□□□□□ -0.01
LRRC46-204ENST00000584580 GAS2L2Q8NHY3 880 aa14.98□□□□□ -0.01
LRRC46-204ENST00000584580 MBIPQ9NS73 344 aa14.98□□□□□ -0.01
LRRC46-204ENST00000584580 CANXP27824 592 aaKnown RBP14.98□□□□□ -0.01
LRRC46-204ENST00000584580 RTF1Q92541 710 aaKnown RBP14.98□□□□□ -0.01
LRRC46-204ENST00000584580 PHRF1Q9P1Y6 1649 aaKnown RBP14.98□□□□□ -0.01
LRRC46-204ENST00000584580 KIAA0232Q92628 1395 aa14.97□□□□□ -0.01
LRRC46-204ENST00000584580 HAP1P54257 671 aaPredicted RBP14.97□□□□□ -0.01
LRRC46-204ENST00000584580 CFAP44Q96MT7 982 aa14.97□□□□□ -0.01
LRRC46-204ENST00000584580 ZNF853P0CG23 659 aa14.97□□□□□ -0.01
LRRC46-204ENST00000584580 ELL2O00472 640 aaPredicted RBP14.96□□□□□ -0.01
LRRC46-204ENST00000584580 CCDC136Q96JN2 1154 aa14.96□□□□□ -0.01
LRRC46-204ENST00000584580 ERBB3P21860 1342 aa14.96□□□□□ -0.01
LRRC46-204ENST00000584580 LTBP4Q8N2S1 1624 aa14.96□□□□□ -0.01
LRRC46-204ENST00000584580 NLRP2Q9NX02 1062 aa14.95□□□□□ -0.02
LRRC46-204ENST00000584580 RGPD2P0DJD1 1756 aa14.95□□□□□ -0.02
LRRC46-204ENST00000584580 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
LRRC46-204ENST00000584580 CSB-PGBD3P0DP91 1061 aa14.94□□□□□ -0.02
LRRC46-204ENST00000584580 SMC4Q9NTJ3 1288 aa14.94□□□□□ -0.02
LRRC46-204ENST00000584580 MIS18AQ9NYP9 233 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms