RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 COLQQ9Y215 455 aaPredicted RBP4.47□□□□□ -1.69
CCDC178-213ENST00000583930 PARP4Q9UKK3 1724 aaKnown RBP4.47□□□□□ -1.69
CCDC178-213ENST00000583930 CFAP65Q6ZU64 1925 aaKnown RBP4.47□□□□□ -1.69
CCDC178-213ENST00000583930 KIF3BO15066 747 aa4.47□□□□□ -1.69
CCDC178-213ENST00000583930 PDIA6Q15084 440 aa4.47□□□□□ -1.69
CCDC178-213ENST00000583930 TMC2Q8TDI7 906 aa4.47□□□□□ -1.69
CCDC178-213ENST00000583930 AK7Q96M32 723 aa4.47□□□□□ -1.69
CCDC178-213ENST00000583930 SMYD5Q6GMV2 418 aa4.47□□□□□ -1.69
CCDC178-213ENST00000583930 ILDR1Q86SU0 546 aaPredicted RBP4.47□□□□□ -1.69
CCDC178-213ENST00000583930 CCDC102AQ96A19 550 aa4.47□□□□□ -1.69
CCDC178-213ENST00000583930 WASHC2CQ9Y4E1 1318 aa4.46□□□□□ -1.69
CCDC178-213ENST00000583930 SSH2Q76I76 1423 aa4.46□□□□□ -1.69
CCDC178-213ENST00000583930 SMG6Q86US8 1419 aaKnown RBP4.46□□□□□ -1.69
CCDC178-213ENST00000583930 YTHDC2Q9H6S0 1430 aaKnown RBP4.46□□□□□ -1.69
CCDC178-213ENST00000583930 TIE1P35590 1138 aa4.46□□□□□ -1.7
CCDC178-213ENST00000583930 REPIN1Q9BWE0 567 aaKnown RBP4.46□□□□□ -1.7
CCDC178-213ENST00000583930 NPC1L1Q9UHC9 1359 aa4.46□□□□□ -1.7
CCDC178-213ENST00000583930 RGPD8O14715 1765 aaPredicted RBP4.46□□□□□ -1.7
CCDC178-213ENST00000583930 FOXK1P85037 733 aa4.46□□□□□ -1.7
CCDC178-213ENST00000583930 C14orf93Q9H972 538 aaKnown RBP4.46□□□□□ -1.7
CCDC178-213ENST00000583930 RRP7BPQ9NSQ0 103 aa4.46□□□□□ -1.7
CCDC178-213ENST00000583930 PLEKHG3A1L390 1219 aa4.45□□□□□ -1.7
CCDC178-213ENST00000583930 HDGFP51858 240 aaKnown RBP4.45□□□□□ -1.7
CCDC178-213ENST00000583930 MAP3K9P80192 1104 aa4.45□□□□□ -1.7
CCDC178-213ENST00000583930 THEMISQ8N1K5 641 aaPredicted RBP4.45□□□□□ -1.7
CCDC178-213ENST00000583930 CDHR5Q9HBB8 845 aa4.45□□□□□ -1.7
CCDC178-213ENST00000583930 INSRP06213 1382 aa4.45□□□□□ -1.7
CCDC178-213ENST00000583930 ROBO1Q9Y6N7 1651 aa4.45□□□□□ -1.7
CCDC178-213ENST00000583930 IRX5P78411 483 aaPredicted RBP4.45□□□□□ -1.7
CCDC178-213ENST00000583930 PXDNQ92626 1479 aa4.45□□□□□ -1.7
CCDC178-213ENST00000583930 OSBPP22059 807 aa4.44□□□□□ -1.7
CCDC178-213ENST00000583930 FAM50AQ14320 339 aaKnown RBP4.44□□□□□ -1.7
CCDC178-213ENST00000583930 PARP9Q8IXQ6 854 aa4.44□□□□□ -1.7
CCDC178-213ENST00000583930 C1orf115Q9H7X2 142 aa4.44□□□□□ -1.7
CCDC178-213ENST00000583930 BOLA1Q9Y3E2 137 aa4.44□□□□□ -1.7
CCDC178-213ENST00000583930 ARIH1Q9Y4X5 557 aaPredicted RBP4.44□□□□□ -1.7
CCDC178-213ENST00000583930 NCAPD2Q15021 1401 aa4.44□□□□□ -1.7
CCDC178-213ENST00000583930 ZNF316A6NFI3 1004 aaPredicted RBP4.44□□□□□ -1.7
CCDC178-213ENST00000583930 POLR3AO14802 1390 aaPredicted RBP4.44□□□□□ -1.7
CCDC178-213ENST00000583930 COL24A1Q17RW2 1714 aa4.44□□□□□ -1.7
CCDC178-213ENST00000583930 COL14A1Q05707 1796 aaKnown RBP4.44□□□□□ -1.7
CCDC178-213ENST00000583930 QSER1Q2KHR3 1735 aa4.43□□□□□ -1.7
CCDC178-213ENST00000583930 PKD1L3Q7Z443 1732 aa4.43□□□□□ -1.7
CCDC178-213ENST00000583930 CD163L1Q9NR16 1453 aa4.43□□□□□ -1.7
CCDC178-213ENST00000583930 KIF3CO14782 793 aa4.43□□□□□ -1.7
CCDC178-213ENST00000583930 ATMINO43313 823 aaPredicted RBP4.43□□□□□ -1.7
CCDC178-213ENST00000583930 RBM33Q96EV2 1170 aaKnown RBP4.43□□□□□ -1.7
CCDC178-213ENST00000583930 PHLPP1O60346 1717 aa4.43□□□□□ -1.7
CCDC178-213ENST00000583930 PEAK1Q9H792 1746 aa4.43□□□□□ -1.7
CCDC178-213ENST00000583930 CPSF1Q10570 1443 aaKnown RBP4.43□□□□□ -1.7
CCDC178-213ENST00000583930 IDI1Q13907 227 aa4.43□□□□□ -1.7
CCDC178-213ENST00000583930 TTLL12Q14166 644 aaPredicted RBP4.43□□□□□ -1.7
CCDC178-213ENST00000583930 PHOX2BQ99453 314 aa4.43□□□□□ -1.7
CCDC178-213ENST00000583930 ZNF777Q9ULD5 760 aaPredicted RBP4.43□□□□□ -1.7
CCDC178-213ENST00000583930 CDK12Q9NYV4 1490 aaPredicted RBP4.43□□□□□ -1.7
CCDC178-213ENST00000583930 LRP6O75581 1613 aa4.42□□□□□ -1.7
CCDC178-213ENST00000583930 POTEFA5A3E0 1075 aa4.42□□□□□ -1.7
CCDC178-213ENST00000583930 TSR1Q2NL82 804 aaKnown RBP4.42□□□□□ -1.7
CCDC178-213ENST00000583930 NFAT5O94916 1531 aa4.42□□□□□ -1.7
CCDC178-213ENST00000583930 MS4A1P11836 297 aa4.42□□□□□ -1.7
CCDC178-213ENST00000583930 ATP1B4Q9UN42 357 aaPredicted RBP4.42□□□□□ -1.7
CCDC178-213ENST00000583930 THSD7AQ9UPZ6 1657 aa4.42□□□□□ -1.7
CCDC178-213ENST00000583930 GLI3P10071 1580 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 SHANK3Q9BYB0 1731 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 IRF6O14896 467 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 KCNA6P17658 529 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 CLCN6P51797 869 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 ARXQ96QS3 562 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 OCEL1Q9H607 264 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 KIF24Q5T7B8 1368 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 USP31Q70CQ4 1352 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 LTN1O94822 1766 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 POTEB2H3BUK9 544 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 SBNO1A3KN83 1393 aa4.41□□□□□ -1.7
CCDC178-213ENST00000583930 KTN1Q86UP2 1357 aaKnown RBP4.41□□□□□ -1.7
CCDC178-213ENST00000583930 LRRC37A3O60309 1634 aa4.4□□□□□ -1.7
CCDC178-213ENST00000583930 PAPPAQ13219 1627 aa4.4□□□□□ -1.7
CCDC178-213ENST00000583930 CLUAP1Q96AJ1 413 aa4.4□□□□□ -1.7
CCDC178-213ENST00000583930 VIRMAQ69YN4 1812 aaKnown RBP4.4□□□□□ -1.71
CCDC178-213ENST00000583930 SIPA1L3O60292 1781 aaPredicted RBP4.4□□□□□ -1.71
CCDC178-213ENST00000583930 ROCK2O75116 1388 aaKnown RBP4.4□□□□□ -1.71
CCDC178-213ENST00000583930 NSD2O96028 1365 aa4.4□□□□□ -1.71
CCDC178-213ENST00000583930 GNPATO15228 680 aa4.4□□□□□ -1.71
CCDC178-213ENST00000583930 RANGAP1P46060 587 aaPredicted RBP4.4□□□□□ -1.71
CCDC178-213ENST00000583930 TMEM121BQ9BXQ6 578 aaPredicted RBP4.4□□□□□ -1.71
CCDC178-213ENST00000583930 METP08581 1390 aa4.39□□□□□ -1.71
CCDC178-213ENST00000583930 RREB1Q92766 1687 aa4.39□□□□□ -1.71
CCDC178-213ENST00000583930 EVI5O60447 810 aa4.39□□□□□ -1.71
CCDC178-213ENST00000583930 PPP1R15AO75807 674 aaPredicted RBP4.39□□□□□ -1.71
CCDC178-213ENST00000583930 ZEB1P37275 1124 aaPredicted RBP4.39□□□□□ -1.71
CCDC178-213ENST00000583930 ANKLE2Q86XL3 938 aa4.39□□□□□ -1.71
CCDC178-213ENST00000583930 HOMEZQ8IX15 550 aa4.39□□□□□ -1.71
CCDC178-213ENST00000583930 N4BP2Q86UW6 1770 aaPredicted RBP4.39□□□□□ -1.71
CCDC178-213ENST00000583930 PLCG2P16885 1265 aa4.39□□□□□ -1.71
CCDC178-213ENST00000583930 KHSRPQ92945 711 aaKnown RBP eCLIP4.39□□□□□ -1.71
CCDC178-213ENST00000583930 SEC24BO95487 1268 aa4.38□□□□□ -1.71
CCDC178-213ENST00000583930 MAP2K5Q13163 448 aa4.38□□□□□ -1.71
CCDC178-213ENST00000583930 ASTLQ6HA08 431 aaPredicted RBP4.38□□□□□ -1.71
CCDC178-213ENST00000583930 GIGYF2Q6Y7W6 1299 aaKnown RBP4.38□□□□□ -1.71
CCDC178-213ENST00000583930 OXER1Q8TDS5 423 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms