RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 KLHL40Q2TBA0 621 aa12.89□□□□□ -0.35
RNF43-207ENST00000583753 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
RNF43-207ENST00000583753 NUP160Q12769 1436 aa12.89□□□□□ -0.35
RNF43-207ENST00000583753 C14orf93Q9H972 538 aaKnown RBP12.88□□□□□ -0.35
RNF43-207ENST00000583753 FGD1P98174 961 aa12.88□□□□□ -0.35
RNF43-207ENST00000583753 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
RNF43-207ENST00000583753 ISY1Q9ULR0 285 aaKnown RBP12.88□□□□□ -0.35
RNF43-207ENST00000583753 FCHSD2O94868 740 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 SDSP20132 328 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 CEP170Q5SW79 1584 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 TSC1Q92574 1164 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 ABCC10Q5T3U5 1492 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 ERC2O15083 957 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 FOSBP53539 338 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 SNX21Q969T3 373 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
RNF43-207ENST00000583753 VAMP4O75379 141 aa12.86□□□□□ -0.35
RNF43-207ENST00000583753 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
RNF43-207ENST00000583753 IDI1Q13907 227 aa12.86□□□□□ -0.35
RNF43-207ENST00000583753 MEIS3Q99687 375 aa12.86□□□□□ -0.35
RNF43-207ENST00000583753 TSPY26PQ9H489 355 aa12.86□□□□□ -0.35
RNF43-207ENST00000583753 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
RNF43-207ENST00000583753 ZNF592Q92610 1267 aa12.86□□□□□ -0.35
RNF43-207ENST00000583753 USP25Q9UHP3 1055 aa12.86□□□□□ -0.35
RNF43-207ENST00000583753 ZHX1Q9UKY1 873 aaPredicted RBP12.86□□□□□ -0.35
RNF43-207ENST00000583753 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
RNF43-207ENST00000583753 AMPHP49418 695 aa12.85□□□□□ -0.35
RNF43-207ENST00000583753 NCKAP5LQ9HCH0 1330 aa12.85□□□□□ -0.35
RNF43-207ENST00000583753 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
RNF43-207ENST00000583753 PLEKHM2Q8IWE5 1019 aa12.85□□□□□ -0.35
RNF43-207ENST00000583753 MRPL50Q8N5N7 158 aaKnown RBP12.85□□□□□ -0.35
RNF43-207ENST00000583753 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
RNF43-207ENST00000583753 C17orf53Q8N3J3 647 aaPredicted RBP12.84□□□□□ -0.35
RNF43-207ENST00000583753 TTC22Q5TAA0 569 aa12.84□□□□□ -0.35
RNF43-207ENST00000583753 UGGT1Q9NYU2 1555 aa12.84□□□□□ -0.35
RNF43-207ENST00000583753 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
RNF43-207ENST00000583753 FBXO31Q5XUX0 539 aaPredicted RBP12.84□□□□□ -0.35
RNF43-207ENST00000583753 AEBP1Q8IUX7 1158 aa12.84□□□□□ -0.35
RNF43-207ENST00000583753 PDCL3Q9H2J4 239 aa12.84□□□□□ -0.35
RNF43-207ENST00000583753 POLR1AO95602 1720 aaPredicted RBP12.84□□□□□ -0.35
RNF43-207ENST00000583753 SURF6O75683 361 aaKnown RBP12.83□□□□□ -0.36
RNF43-207ENST00000583753 CBX1P83916 185 aa12.83□□□□□ -0.36
RNF43-207ENST00000583753 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
RNF43-207ENST00000583753 GSPT1P15170 499 aaKnown RBP12.82□□□□□ -0.36
RNF43-207ENST00000583753 PTPRTO14522 1441 aa12.82□□□□□ -0.36
RNF43-207ENST00000583753 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
RNF43-207ENST00000583753 PRDM15P57071 1507 aaPredicted RBP12.82□□□□□ -0.36
RNF43-207ENST00000583753 PHF14O94880 888 aa12.82□□□□□ -0.36
RNF43-207ENST00000583753 SMC3Q9UQE7 1217 aa12.82□□□□□ -0.36
RNF43-207ENST00000583753 NPC1L1Q9UHC9 1359 aa12.82□□□□□ -0.36
RNF43-207ENST00000583753 TTC12Q9H892 705 aaPredicted RBP12.82□□□□□ -0.36
RNF43-207ENST00000583753 MBD3O95983 291 aa12.81□□□□□ -0.36
RNF43-207ENST00000583753 FERMT3Q86UX7 667 aa12.81□□□□□ -0.36
RNF43-207ENST00000583753 CWC22Q9HCG8 908 aaKnown RBP12.81□□□□□ -0.36
RNF43-207ENST00000583753 EIF2AK4Q9P2K8 1649 aaKnown RBP12.81□□□□□ -0.36
RNF43-207ENST00000583753 DUOX2Q9NRD8 1548 aa12.81□□□□□ -0.36
RNF43-207ENST00000583753 ERVK-7P63135 1459 aa12.81□□□□□ -0.36
RNF43-207ENST00000583753 TMX3Q96JJ7 454 aa12.81□□□□□ -0.36
RNF43-207ENST00000583753 POLKQ9UBT6 870 aa12.81□□□□□ -0.36
RNF43-207ENST00000583753 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
RNF43-207ENST00000583753 A0A1W2PP64 1363 aa12.81□□□□□ -0.36
RNF43-207ENST00000583753 IGSF3O75054 1194 aa12.81□□□□□ -0.36
RNF43-207ENST00000583753 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
RNF43-207ENST00000583753 USP26Q9BXU7 913 aa12.8□□□□□ -0.36
RNF43-207ENST00000583753 SAMD9LQ8IVG5 1584 aa12.8□□□□□ -0.36
RNF43-207ENST00000583753 NPHP1O15259 732 aa12.8□□□□□ -0.36
RNF43-207ENST00000583753 OFD1O75665 1012 aa12.8□□□□□ -0.36
RNF43-207ENST00000583753 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
RNF43-207ENST00000583753 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
RNF43-207ENST00000583753 DIAPH3Q9NSV4 1193 aa12.79□□□□□ -0.36
RNF43-207ENST00000583753 TMEM63CQ9P1W3 806 aa12.79□□□□□ -0.36
RNF43-207ENST00000583753 CAMK4Q16566 473 aa12.79□□□□□ -0.36
RNF43-207ENST00000583753 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
RNF43-207ENST00000583753 SIRT2Q8IXJ6 389 aa12.79□□□□□ -0.36
RNF43-207ENST00000583753 LMBRD1Q9NUN5 540 aa12.79□□□□□ -0.36
RNF43-207ENST00000583753 NSFL1CQ9UNZ2 370 aaKnown RBP12.79□□□□□ -0.36
RNF43-207ENST00000583753 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
RNF43-207ENST00000583753 GNAI2P04899 355 aa12.78□□□□□ -0.36
RNF43-207ENST00000583753 CEBPZQ03701 1054 aaKnown RBP12.78□□□□□ -0.36
RNF43-207ENST00000583753 LRRCC1Q9C099 1032 aa12.78□□□□□ -0.36
RNF43-207ENST00000583753 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
RNF43-207ENST00000583753 ANKRD36BQ8N2N9 1353 aa12.78□□□□□ -0.36
RNF43-207ENST00000583753 PLCH2O75038 1416 aa12.78□□□□□ -0.36
RNF43-207ENST00000583753 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
RNF43-207ENST00000583753 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
RNF43-207ENST00000583753 STK3Q13188 491 aa12.78□□□□□ -0.36
RNF43-207ENST00000583753 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
RNF43-207ENST00000583753 CDC42BPAQ5VT25 1732 aa12.77□□□□□ -0.36
RNF43-207ENST00000583753 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.36
RNF43-207ENST00000583753 CPA1P15085 419 aa12.77□□□□□ -0.36
RNF43-207ENST00000583753 ZRSR1Q15695 479 aaKnown RBP12.77□□□□□ -0.36
RNF43-207ENST00000583753 LRSAM1Q6UWE0 723 aa12.77□□□□□ -0.36
RNF43-207ENST00000583753 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
RNF43-207ENST00000583753 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.37
RNF43-207ENST00000583753 SPG7Q9UQ90 795 aa12.77□□□□□ -0.37
RNF43-207ENST00000583753 ZKSCAN5Q9Y2L8 839 aa12.77□□□□□ -0.37
RNF43-207ENST00000583753 GPT2Q8TD30 523 aa12.76□□□□□ -0.37
RNF43-207ENST00000583753 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms