RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 BRWD3Q6RI45 1802 aa12.11□□□□□ -0.47
PPP4R1-225ENST00000583438 TBC1D12O60347 775 aa12.1□□□□□ -0.47
PPP4R1-225ENST00000583438 EVI5O60447 810 aa12.1□□□□□ -0.47
PPP4R1-225ENST00000583438 PCDHGA4Q9Y5G9 962 aa12.1□□□□□ -0.47
PPP4R1-225ENST00000583438 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
PPP4R1-225ENST00000583438 PXDNQ92626 1479 aa12.09□□□□□ -0.47
PPP4R1-225ENST00000583438 KNDC1Q76NI1 1749 aa12.09□□□□□ -0.47
PPP4R1-225ENST00000583438 ABCA3Q99758 1704 aa12.09□□□□□ -0.47
PPP4R1-225ENST00000583438 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-225ENST00000583438 HDGFP51858 240 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-225ENST00000583438 ZNF772Q68DY9 489 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-225ENST00000583438 LHX8Q68G74 356 aa12.09□□□□□ -0.47
PPP4R1-225ENST00000583438 FMN2Q9NZ56 1722 aa12.08□□□□□ -0.47
PPP4R1-225ENST00000583438 SMYD5Q6GMV2 418 aa12.08□□□□□ -0.48
PPP4R1-225ENST00000583438 ORAI2Q96SN7 254 aa12.08□□□□□ -0.48
PPP4R1-225ENST00000583438 MYOM2P54296 1465 aa12.08□□□□□ -0.48
PPP4R1-225ENST00000583438 RXRBP28702 533 aa12.07□□□□□ -0.48
PPP4R1-225ENST00000583438 C8orf37Q96NL8 207 aa12.07□□□□□ -0.48
PPP4R1-225ENST00000583438 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-225ENST00000583438 GLI3P10071 1580 aa12.06□□□□□ -0.48
PPP4R1-225ENST00000583438 ZNF326Q5BKZ1 582 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-225ENST00000583438 SOS2Q07890 1332 aaPredicted RBP12.06□□□□□ -0.48
PPP4R1-225ENST00000583438 GRXCR2A6NFK2 248 aa12.05□□□□□ -0.48
PPP4R1-225ENST00000583438 PTGER2P43116 358 aa12.05□□□□□ -0.48
PPP4R1-225ENST00000583438 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
PPP4R1-225ENST00000583438 ATRNO75882 1429 aa12.04□□□□□ -0.48
PPP4R1-225ENST00000583438 BCL9LQ86UU0 1499 aa12.04□□□□□ -0.48
PPP4R1-225ENST00000583438 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-225ENST00000583438 DDX12PQ92771 950 aa12.04□□□□□ -0.48
PPP4R1-225ENST00000583438 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
PPP4R1-225ENST00000583438 PLEKHH1Q9ULM0 1364 aa12.04□□□□□ -0.48
PPP4R1-225ENST00000583438 PLCH1Q4KWH8 1693 aa12.03□□□□□ -0.48
PPP4R1-225ENST00000583438 HFM1A2PYH4 1435 aa12.03□□□□□ -0.48
PPP4R1-225ENST00000583438 ADAMTS2O95450 1211 aa12.03□□□□□ -0.48
PPP4R1-225ENST00000583438 KHSRPQ92945 711 aaKnown RBP eCLIP12.03□□□□□ -0.488e-7■■■□□ 17.7
PPP4R1-225ENST00000583438 USP32Q8NFA0 1604 aa12.03□□□□□ -0.48
PPP4R1-225ENST00000583438 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
PPP4R1-225ENST00000583438 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
PPP4R1-225ENST00000583438 LRRC59Q96AG4 307 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-225ENST00000583438 QTRT2Q9H974 415 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-225ENST00000583438 ADGRF5Q8IZF2 1346 aa12.01□□□□□ -0.49
PPP4R1-225ENST00000583438 RBM6P78332 1123 aaKnown RBP12□□□□□ -0.49
PPP4R1-225ENST00000583438 XPCQ01831 940 aaPredicted RBP12□□□□□ -0.49
PPP4R1-225ENST00000583438 GPR153Q6NV75 609 aa12□□□□□ -0.49
PPP4R1-225ENST00000583438 TECPR2O15040 1411 aa12□□□□□ -0.49
PPP4R1-225ENST00000583438 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
PPP4R1-225ENST00000583438 OSBPP22059 807 aa11.99□□□□□ -0.49
PPP4R1-225ENST00000583438 ZC3H15Q8WU90 426 aaKnown RBP11.99□□□□□ -0.49
PPP4R1-225ENST00000583438 KIF1AQ12756 1690 aa11.99□□□□□ -0.49
PPP4R1-225ENST00000583438 NRAPQ86VF7 1730 aa11.99□□□□□ -0.49
PPP4R1-225ENST00000583438 TRPM3Q9HCF6 1732 aaPredicted RBP11.98□□□□□ -0.49
PPP4R1-225ENST00000583438 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
PPP4R1-225ENST00000583438 NUDT7P0C024 238 aa11.98□□□□□ -0.49
PPP4R1-225ENST00000583438 FNBP4Q8N3X1 1017 aaPredicted RBP11.98□□□□□ -0.49
PPP4R1-225ENST00000583438 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
PPP4R1-225ENST00000583438 PIK3C2GO75747 1445 aa11.97□□□□□ -0.49
PPP4R1-225ENST00000583438 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
PPP4R1-225ENST00000583438 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
PPP4R1-225ENST00000583438 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
PPP4R1-225ENST00000583438 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
PPP4R1-225ENST00000583438 SLIT2O94813 1529 aa11.96□□□□□ -0.49
PPP4R1-225ENST00000583438 NGLY1Q96IV0 654 aa11.96□□□□□ -0.49
PPP4R1-225ENST00000583438 USP21Q9UK80 565 aa11.96□□□□□ -0.49
PPP4R1-225ENST00000583438 NWD2Q9ULI1 1742 aa11.95□□□□□ -0.5
PPP4R1-225ENST00000583438 ALS2Q96Q42 1657 aa11.95□□□□□ -0.5
PPP4R1-225ENST00000583438 NUTM2FA1L443 756 aa11.95□□□□□ -0.5
PPP4R1-225ENST00000583438 SNPHO15079 494 aa11.95□□□□□ -0.5
PPP4R1-225ENST00000583438 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
PPP4R1-225ENST00000583438 TMEM132EQ6IEE7 984 aa11.94□□□□□ -0.5
PPP4R1-225ENST00000583438 NRXN1Q9ULB1 1477 aa11.94□□□□□ -0.5
PPP4R1-225ENST00000583438 LRPPRCP42704 1394 aaKnown RBP11.93□□□□□ -0.5
PPP4R1-225ENST00000583438 ATAD2Q6PL18 1390 aa11.93□□□□□ -0.5
PPP4R1-225ENST00000583438 FOXO3O43524 673 aa11.93□□□□□ -0.5
PPP4R1-225ENST00000583438 GPIHBP1Q8IV16 184 aa11.93□□□□□ -0.5
PPP4R1-225ENST00000583438 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
PPP4R1-225ENST00000583438 PHF14O94880 888 aa11.92□□□□□ -0.5
PPP4R1-225ENST00000583438 YTHDC2Q9H6S0 1430 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-225ENST00000583438 RPGRIP1LQ68CZ1 1315 aa11.91□□□□□ -0.5
PPP4R1-225ENST00000583438 ESCO1Q5FWF5 840 aa11.91□□□□□ -0.5
PPP4R1-225ENST00000583438 STK26Q9P289 416 aa11.91□□□□□ -0.5
PPP4R1-225ENST00000583438 TRPC5Q9UL62 973 aaPredicted RBP11.91□□□□□ -0.5
PPP4R1-225ENST00000583438 ADGRB1O14514 1584 aa11.91□□□□□ -0.5
PPP4R1-225ENST00000583438 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
PPP4R1-225ENST00000583438 TNS1Q9HBL0 1735 aaKnown RBP11.91□□□□□ -0.5
PPP4R1-225ENST00000583438 ABCC11Q96J66 1382 aa11.91□□□□□ -0.5
PPP4R1-225ENST00000583438 NPHP3Q7Z494 1330 aa11.89□□□□□ -0.51
PPP4R1-225ENST00000583438 CCDC144AA2RUR9 1427 aa11.89□□□□□ -0.51
PPP4R1-225ENST00000583438 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
PPP4R1-225ENST00000583438 ARHGEF28Q8N1W1 1705 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-225ENST00000583438 SPATA31A3Q5VYP0 1347 aa11.88□□□□□ -0.51
PPP4R1-225ENST00000583438 GPR37O15354 613 aa11.88□□□□□ -0.51
PPP4R1-225ENST00000583438 ZMYND10O75800 440 aa11.88□□□□□ -0.51
PPP4R1-225ENST00000583438 FOSBP53539 338 aa11.88□□□□□ -0.51
PPP4R1-225ENST00000583438 RGL3Q3MIN7 710 aa11.88□□□□□ -0.51
PPP4R1-225ENST00000583438 EPAS1Q99814 870 aa11.88□□□□□ -0.51
PPP4R1-225ENST00000583438 LHX6Q9UPM6 363 aa11.88□□□□□ -0.51
PPP4R1-225ENST00000583438 LRP5O75197 1615 aa11.88□□□□□ -0.51
PPP4R1-225ENST00000583438 TNS3Q68CZ2 1445 aa11.87□□□□□ -0.51
PPP4R1-225ENST00000583438 EN1Q05925 392 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-225ENST00000583438 CABLES1Q8TDN4 633 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms