RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
SRSF1-205ENST00000582730 CDK12Q9NYV4 1490 aaPredicted RBP17.41■□□□□ 0.38
SRSF1-205ENST00000582730 AAMPQ13685 434 aa17.41■□□□□ 0.38
SRSF1-205ENST00000582730 AATKQ6ZMQ8 1374 aa17.4■□□□□ 0.38
SRSF1-205ENST00000582730 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
SRSF1-205ENST00000582730 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
SRSF1-205ENST00000582730 FAM83GA6ND36 823 aa17.39■□□□□ 0.37
SRSF1-205ENST00000582730 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
SRSF1-205ENST00000582730 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.39■□□□□ 0.37
SRSF1-205ENST00000582730 PTPRUQ92729 1446 aa17.39■□□□□ 0.37
SRSF1-205ENST00000582730 IPO8O15397 1037 aaKnown RBP17.38■□□□□ 0.37
SRSF1-205ENST00000582730 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
SRSF1-205ENST00000582730 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
SRSF1-205ENST00000582730 TMEM57Q8N5G2 664 aa17.38■□□□□ 0.37
SRSF1-205ENST00000582730 KIF16BQ96L93 1317 aa17.38■□□□□ 0.37
SRSF1-205ENST00000582730 AEBP1Q8IUX7 1158 aa17.38■□□□□ 0.37
SRSF1-205ENST00000582730 NGDNQ8NEJ9 315 aaKnown RBP17.38■□□□□ 0.37
SRSF1-205ENST00000582730 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
SRSF1-205ENST00000582730 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
SRSF1-205ENST00000582730 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.38■□□□□ 0.37
SRSF1-205ENST00000582730 SULT6B1Q6IMI4 303 aa17.38■□□□□ 0.37
SRSF1-205ENST00000582730 THEMISQ8N1K5 641 aaPredicted RBP17.38■□□□□ 0.37
SRSF1-205ENST00000582730 GNAI1P63096 354 aa17.36■□□□□ 0.37
SRSF1-205ENST00000582730 EIF4A2Q14240 407 aaKnown RBP17.36■□□□□ 0.37
SRSF1-205ENST00000582730 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
SRSF1-205ENST00000582730 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
SRSF1-205ENST00000582730 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
SRSF1-205ENST00000582730 PLEKHG3A1L390 1219 aa17.35■□□□□ 0.37
SRSF1-205ENST00000582730 C3P01024 1663 aa17.35■□□□□ 0.37
SRSF1-205ENST00000582730 HSP90AB2PQ58FF8 381 aa17.35■□□□□ 0.37
SRSF1-205ENST00000582730 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
SRSF1-205ENST00000582730 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
SRSF1-205ENST00000582730 TBX22Q9Y458 520 aa17.34■□□□□ 0.37
SRSF1-205ENST00000582730 USP6P35125 1406 aa17.34■□□□□ 0.37
SRSF1-205ENST00000582730 ALDH1L2Q3SY69 923 aa17.34■□□□□ 0.37
SRSF1-205ENST00000582730 IFT57Q9NWB7 429 aa17.34■□□□□ 0.37
SRSF1-205ENST00000582730 GSE1Q14687 1217 aa17.33■□□□□ 0.37
SRSF1-205ENST00000582730 FER1L4A9Z1Z3 1794 aa17.32■□□□□ 0.36
SRSF1-205ENST00000582730 VAMP4O75379 141 aa17.32■□□□□ 0.36
SRSF1-205ENST00000582730 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
SRSF1-205ENST00000582730 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
SRSF1-205ENST00000582730 SEC24BO95487 1268 aa17.31■□□□□ 0.36
SRSF1-205ENST00000582730 NFKBIBQ15653 356 aa17.31■□□□□ 0.36
SRSF1-205ENST00000582730 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
SRSF1-205ENST00000582730 KCNA6P17658 529 aa17.3■□□□□ 0.36
SRSF1-205ENST00000582730 C8orf58Q8NAV2 365 aa17.3■□□□□ 0.36
SRSF1-205ENST00000582730 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
SRSF1-205ENST00000582730 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
SRSF1-205ENST00000582730 MCM10Q7L590 875 aa17.29■□□□□ 0.36
SRSF1-205ENST00000582730 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
SRSF1-205ENST00000582730 AMPHP49418 695 aa17.29■□□□□ 0.36
SRSF1-205ENST00000582730 SLIT1O75093 1534 aa17.28■□□□□ 0.36
SRSF1-205ENST00000582730 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
SRSF1-205ENST00000582730 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
SRSF1-205ENST00000582730 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
SRSF1-205ENST00000582730 C1orf115Q9H7X2 142 aa17.28■□□□□ 0.36
SRSF1-205ENST00000582730 ZBTB40Q9NUA8 1239 aa17.28■□□□□ 0.36
SRSF1-205ENST00000582730 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
SRSF1-205ENST00000582730 ARHGAP23Q9P227 1491 aa17.28■□□□□ 0.36
SRSF1-205ENST00000582730 ZNF853P0CG23 659 aa17.27■□□□□ 0.36
SRSF1-205ENST00000582730 NLRP6P59044 892 aa17.27■□□□□ 0.35
SRSF1-205ENST00000582730 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
SRSF1-205ENST00000582730 TOPAZ1Q8N9V7 1692 aa17.26■□□□□ 0.35
SRSF1-205ENST00000582730 HDAC1Q13547 482 aaPredicted RBP17.26■□□□□ 0.35
SRSF1-205ENST00000582730 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
SRSF1-205ENST00000582730 TTC21AQ8NDW8 1320 aa17.25■□□□□ 0.35
SRSF1-205ENST00000582730 NRKQ7Z2Y5 1582 aa17.25■□□□□ 0.35
SRSF1-205ENST00000582730 PTCH1Q13635 1447 aa17.25■□□□□ 0.35
SRSF1-205ENST00000582730 DIP2AQ14689 1571 aa17.25■□□□□ 0.35
SRSF1-205ENST00000582730 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
SRSF1-205ENST00000582730 LTV1Q96GA3 475 aaPredicted RBP17.23■□□□□ 0.35
SRSF1-205ENST00000582730 LNPKQ9C0E8 428 aa17.23■□□□□ 0.35
SRSF1-205ENST00000582730 FOXO3O43524 673 aa17.23■□□□□ 0.35
SRSF1-205ENST00000582730 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
SRSF1-205ENST00000582730 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
SRSF1-205ENST00000582730 MIS18AQ9NYP9 233 aa17.22■□□□□ 0.35
SRSF1-205ENST00000582730 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
SRSF1-205ENST00000582730 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
SRSF1-205ENST00000582730 USP19O94966 1318 aa17.22■□□□□ 0.35
SRSF1-205ENST00000582730 ABTB2Q8N961 1025 aa17.21■□□□□ 0.35
SRSF1-205ENST00000582730 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
SRSF1-205ENST00000582730 FLT4P35916 1363 aa17.21■□□□□ 0.35
SRSF1-205ENST00000582730 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
SRSF1-205ENST00000582730 SMC5Q8IY18 1101 aa17.21■□□□□ 0.35
SRSF1-205ENST00000582730 SSH2Q76I76 1423 aa17.21■□□□□ 0.35
SRSF1-205ENST00000582730 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.34
SRSF1-205ENST00000582730 ZBTB7BO15156 539 aaPredicted RBP17.2■□□□□ 0.34
SRSF1-205ENST00000582730 API5Q9BZZ5 524 aaKnown RBP17.2■□□□□ 0.34
SRSF1-205ENST00000582730 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
SRSF1-205ENST00000582730 CHMP4BQ9H444 224 aaKnown RBP17.2■□□□□ 0.34
SRSF1-205ENST00000582730 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
SRSF1-205ENST00000582730 MTHFSDQ2M296 383 aaKnown RBP17.19■□□□□ 0.34
SRSF1-205ENST00000582730 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
SRSF1-205ENST00000582730 EYA1Q99502 592 aa17.19■□□□□ 0.34
SRSF1-205ENST00000582730 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
SRSF1-205ENST00000582730 MFAP1P55081 439 aaKnown RBP17.19■□□□□ 0.34
SRSF1-205ENST00000582730 ANKRD45Q5TZF3 282 aa17.19■□□□□ 0.34
SRSF1-205ENST00000582730 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
SRSF1-205ENST00000582730 ABCC4O15439 1325 aa17.17■□□□□ 0.34
SRSF1-205ENST00000582730 CHL1O00533 1208 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms