RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 IL13P35225 146 aa17.35■□□□□ 0.37
GGA3-214ENST00000582717 RIPK4P57078 832 aa17.35■□□□□ 0.37
GGA3-214ENST00000582717 FAM43AQ8N2R8 423 aa17.35■□□□□ 0.37
GGA3-214ENST00000582717 PNNQ9H307 717 aaKnown RBP17.35■□□□□ 0.37
GGA3-214ENST00000582717 RGPD8O14715 1765 aaPredicted RBP17.35■□□□□ 0.37
GGA3-214ENST00000582717 OVOS2A0A0J9YW53 1432 aa17.34■□□□□ 0.37
GGA3-214ENST00000582717 IGHDP01880 384 aa17.34■□□□□ 0.37
GGA3-214ENST00000582717 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
GGA3-214ENST00000582717 OVOS2Q6IE36 1432 aa17.34■□□□□ 0.37
GGA3-214ENST00000582717 HMOX1P09601 288 aa17.33■□□□□ 0.37
GGA3-214ENST00000582717 PANK1Q8TE04 598 aa17.33■□□□□ 0.37
GGA3-214ENST00000582717 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.37
GGA3-214ENST00000582717 BCL2L13Q9BXK5 485 aa17.33■□□□□ 0.36
GGA3-214ENST00000582717 ZNF142P52746 1687 aaPredicted RBP17.32■□□□□ 0.36
GGA3-214ENST00000582717 SSH2Q76I76 1423 aa17.32■□□□□ 0.36
GGA3-214ENST00000582717 IL16Q14005 1332 aa17.32■□□□□ 0.36
GGA3-214ENST00000582717 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
GGA3-214ENST00000582717 PMFBP1Q8TBY8 1022 aa17.31■□□□□ 0.36
GGA3-214ENST00000582717 PHACTR3Q96KR7 559 aa17.31■□□□□ 0.36
GGA3-214ENST00000582717 TNNQ9UQP3 1299 aa17.31■□□□□ 0.36
GGA3-214ENST00000582717 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
GGA3-214ENST00000582717 COG6Q9Y2V7 657 aa17.31■□□□□ 0.36
GGA3-214ENST00000582717 KCNA6P17658 529 aa17.3■□□□□ 0.36
GGA3-214ENST00000582717 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
GGA3-214ENST00000582717 PEAK1Q9H792 1746 aa17.29■□□□□ 0.36
GGA3-214ENST00000582717 UPF2Q9HAU5 1272 aaKnown RBP17.29■□□□□ 0.36
GGA3-214ENST00000582717 RLBP1P12271 317 aa17.28■□□□□ 0.36
GGA3-214ENST00000582717 NFE2L2Q16236 605 aa17.28■□□□□ 0.36
GGA3-214ENST00000582717 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
GGA3-214ENST00000582717 CT47B1P0C2W7 299 aaPredicted RBP17.28■□□□□ 0.36
GGA3-214ENST00000582717 L1TD1Q5T7N2 865 aaKnown RBP17.28■□□□□ 0.36
GGA3-214ENST00000582717 FMN2Q9NZ56 1722 aa17.27■□□□□ 0.36
GGA3-214ENST00000582717 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.36
GGA3-214ENST00000582717 USP31Q70CQ4 1352 aa17.27■□□□□ 0.36
GGA3-214ENST00000582717 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
GGA3-214ENST00000582717 PIK3C2AO00443 1686 aa17.25■□□□□ 0.35
GGA3-214ENST00000582717 TTC21AQ8NDW8 1320 aa17.25■□□□□ 0.35
GGA3-214ENST00000582717 SEC24BO95487 1268 aa17.24■□□□□ 0.35
GGA3-214ENST00000582717 EIF4A2Q14240 407 aaKnown RBP17.24■□□□□ 0.35
GGA3-214ENST00000582717 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
GGA3-214ENST00000582717 TBC1D32Q96NH3 1257 aa17.24■□□□□ 0.35
GGA3-214ENST00000582717 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
GGA3-214ENST00000582717 NGDNQ8NEJ9 315 aaKnown RBP17.24■□□□□ 0.35
GGA3-214ENST00000582717 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
GGA3-214ENST00000582717 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
GGA3-214ENST00000582717 SSH1Q8WYL5 1049 aa17.23■□□□□ 0.35
GGA3-214ENST00000582717 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
GGA3-214ENST00000582717 RGPD1P0DJD0 1748 aa17.23■□□□□ 0.35
GGA3-214ENST00000582717 SOX12O15370 315 aa17.22■□□□□ 0.35
GGA3-214ENST00000582717 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
GGA3-214ENST00000582717 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
GGA3-214ENST00000582717 HSP90AB2PQ58FF8 381 aa17.21■□□□□ 0.35
GGA3-214ENST00000582717 SETD1BQ9UPS6 1966 aaKnown RBP17.21■□□□□ 0.35
GGA3-214ENST00000582717 RWDD1Q9H446 243 aaPredicted RBP17.21■□□□□ 0.34
GGA3-214ENST00000582717 MARF1Q9Y4F3 1742 aaKnown RBP17.2■□□□□ 0.34
GGA3-214ENST00000582717 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
GGA3-214ENST00000582717 MAP3K19Q56UN5 1328 aa17.19■□□□□ 0.34
GGA3-214ENST00000582717 SULT6B1Q6IMI4 303 aa17.19■□□□□ 0.34
GGA3-214ENST00000582717 MVPQ14764 893 aaKnown RBP17.18■□□□□ 0.34
GGA3-214ENST00000582717 DZIP1LQ8IYY4 767 aaKnown RBP17.18■□□□□ 0.34
GGA3-214ENST00000582717 PDZRN3Q9UPQ7 1066 aa17.18■□□□□ 0.34
GGA3-214ENST00000582717 TRIM27P14373 513 aa17.18■□□□□ 0.34
GGA3-214ENST00000582717 PCDHB15Q9Y5E8 787 aa17.18■□□□□ 0.34
GGA3-214ENST00000582717 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
GGA3-214ENST00000582717 ZNF853P0CG23 659 aa17.17■□□□□ 0.34
GGA3-214ENST00000582717 CALD1Q05682 793 aaKnown RBP17.17■□□□□ 0.34
GGA3-214ENST00000582717 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
GGA3-214ENST00000582717 RBM33Q96EV2 1170 aaKnown RBP17.17■□□□□ 0.34
GGA3-214ENST00000582717 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
GGA3-214ENST00000582717 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
GGA3-214ENST00000582717 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
GGA3-214ENST00000582717 USP54Q70EL1 1684 aa17.16■□□□□ 0.34
GGA3-214ENST00000582717 GNAI1P63096 354 aa17.16■□□□□ 0.34
GGA3-214ENST00000582717 LMOD3Q0VAK6 560 aa17.16■□□□□ 0.34
GGA3-214ENST00000582717 SBNO1A3KN83 1393 aa17.16■□□□□ 0.34
GGA3-214ENST00000582717 ATF7IPQ6VMQ6 1270 aa17.16■□□□□ 0.34
GGA3-214ENST00000582717 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
GGA3-214ENST00000582717 FLT4P35916 1363 aa17.15■□□□□ 0.34
GGA3-214ENST00000582717 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
GGA3-214ENST00000582717 ALDH1L2Q3SY69 923 aa17.15■□□□□ 0.34
GGA3-214ENST00000582717 UBE2Q2Q8WVN8 375 aa17.15■□□□□ 0.34
GGA3-214ENST00000582717 NPHP4O75161 1426 aaPredicted RBP17.14■□□□□ 0.34
GGA3-214ENST00000582717 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
GGA3-214ENST00000582717 TSPYL6Q8N831 410 aa17.14■□□□□ 0.33
GGA3-214ENST00000582717 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
GGA3-214ENST00000582717 EIF5BO60841 1220 aaKnown RBP17.13■□□□□ 0.33
GGA3-214ENST00000582717 NLRP6P59044 892 aa17.13■□□□□ 0.33
GGA3-214ENST00000582717 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
GGA3-214ENST00000582717 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
GGA3-214ENST00000582717 VAMP4O75379 141 aa17.13■□□□□ 0.33
GGA3-214ENST00000582717 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
GGA3-214ENST00000582717 PHF8Q9UPP1 1060 aa17.12■□□□□ 0.33
GGA3-214ENST00000582717 FSD2A1L4K1 749 aa17.11■□□□□ 0.33
GGA3-214ENST00000582717 MCM4P33991 863 aa17.11■□□□□ 0.33
GGA3-214ENST00000582717 ZNF428Q96B54 188 aa17.11■□□□□ 0.33
GGA3-214ENST00000582717 CHMP5Q9NZZ3 219 aa17.11■□□□□ 0.33
GGA3-214ENST00000582717 GOLGA6L3A6NEY3 463 aa17.1■□□□□ 0.33
GGA3-214ENST00000582717 AMPHP49418 695 aa17.1■□□□□ 0.33
GGA3-214ENST00000582717 ITPRIPQ8IWB1 547 aa17.1■□□□□ 0.33
GGA3-214ENST00000582717 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms