RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 HSP90AB2PQ58FF8 381 aa19.45■□□□□ 0.7
CDK5RAP3-218ENST00000580391 ALS2Q96Q42 1657 aa19.45■□□□□ 0.7
CDK5RAP3-218ENST00000580391 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP3-218ENST00000580391 ZNF335Q9H4Z2 1342 aaPredicted RBP19.44■□□□□ 0.7
CDK5RAP3-218ENST00000580391 PNNQ9H307 717 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP3-218ENST00000580391 MSH6P52701 1360 aa19.44■□□□□ 0.7
CDK5RAP3-218ENST00000580391 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
CDK5RAP3-218ENST00000580391 TRIM35Q9UPQ4 493 aa19.41■□□□□ 0.7
CDK5RAP3-218ENST00000580391 SLIT3O75094 1523 aa19.41■□□□□ 0.7
CDK5RAP3-218ENST00000580391 ERICH6BQ5W0A0 696 aa19.41■□□□□ 0.7
CDK5RAP3-218ENST00000580391 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
CDK5RAP3-218ENST00000580391 PHRF1Q9P1Y6 1649 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-218ENST00000580391 AMPHP49418 695 aa19.4■□□□□ 0.7
CDK5RAP3-218ENST00000580391 CADPS2Q86UW7 1296 aa19.4■□□□□ 0.7
CDK5RAP3-218ENST00000580391 AEBP1Q8IUX7 1158 aa19.4■□□□□ 0.7
CDK5RAP3-218ENST00000580391 RIPK4P57078 832 aa19.39■□□□□ 0.7
CDK5RAP3-218ENST00000580391 KIF24Q5T7B8 1368 aa19.39■□□□□ 0.69
CDK5RAP3-218ENST00000580391 NEFMP07197 916 aa19.38■□□□□ 0.69
CDK5RAP3-218ENST00000580391 KRT28Q7Z3Y7 464 aa19.38■□□□□ 0.69
CDK5RAP3-218ENST00000580391 ARHGEF10O15013 1369 aa19.38■□□□□ 0.69
CDK5RAP3-218ENST00000580391 HOXC9P31274 260 aa19.37■□□□□ 0.69
CDK5RAP3-218ENST00000580391 SULT6B1Q6IMI4 303 aa19.37■□□□□ 0.69
CDK5RAP3-218ENST00000580391 RTL1A6NKG5 1358 aa19.37■□□□□ 0.69
CDK5RAP3-218ENST00000580391 DDX17Q92841 729 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-218ENST00000580391 NFE2L2Q16236 605 aa19.36■□□□□ 0.69
CDK5RAP3-218ENST00000580391 RGPD2P0DJD1 1756 aa19.36■□□□□ 0.69
CDK5RAP3-218ENST00000580391 PLIN1O60240 522 aa19.35■□□□□ 0.69
CDK5RAP3-218ENST00000580391 PPP4R2Q9NY27 417 aa19.35■□□□□ 0.69
CDK5RAP3-218ENST00000580391 MED1Q15648 1581 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-218ENST00000580391 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
CDK5RAP3-218ENST00000580391 USP19O94966 1318 aa19.34■□□□□ 0.69
CDK5RAP3-218ENST00000580391 PXDNQ92626 1479 aa19.34■□□□□ 0.69
CDK5RAP3-218ENST00000580391 PLEKHG5O94827 1062 aa19.33■□□□□ 0.69
CDK5RAP3-218ENST00000580391 CRYBG1Q9Y4K1 1723 aa19.33■□□□□ 0.69
CDK5RAP3-218ENST00000580391 IGSF1Q8N6C5 1336 aa19.33■□□□□ 0.69
CDK5RAP3-218ENST00000580391 RGPD5Q99666 1765 aa19.33■□□□□ 0.68
CDK5RAP3-218ENST00000580391 KDRP35968 1356 aa19.32■□□□□ 0.68
CDK5RAP3-218ENST00000580391 KCNH5Q8NCM2 988 aa19.32■□□□□ 0.68
CDK5RAP3-218ENST00000580391 MYH16Q9H6N6 1097 aa19.32■□□□□ 0.68
CDK5RAP3-218ENST00000580391 FANCIQ9NVI1 1328 aa19.32■□□□□ 0.68
CDK5RAP3-218ENST00000580391 TSR2Q969E8 191 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-218ENST00000580391 EYA1Q99502 592 aa19.32■□□□□ 0.68
CDK5RAP3-218ENST00000580391 IL16Q14005 1332 aa19.31■□□□□ 0.68
CDK5RAP3-218ENST00000580391 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
CDK5RAP3-218ENST00000580391 TNS3Q68CZ2 1445 aa19.3■□□□□ 0.68
CDK5RAP3-218ENST00000580391 ZBTB7CA1YPR0 619 aa19.3■□□□□ 0.68
CDK5RAP3-218ENST00000580391 GCP02774 474 aa19.3■□□□□ 0.68
CDK5RAP3-218ENST00000580391 LTV1Q96GA3 475 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-218ENST00000580391 THUMPD2Q9BTF0 503 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-218ENST00000580391 B4GALNT3Q6L9W6 998 aa19.28■□□□□ 0.68
CDK5RAP3-218ENST00000580391 BRINP3Q76B58 766 aa19.28■□□□□ 0.68
CDK5RAP3-218ENST00000580391 EXOC6Q8TAG9 804 aa19.28■□□□□ 0.68
CDK5RAP3-218ENST00000580391 IP6K1Q92551 441 aa19.28■□□□□ 0.68
CDK5RAP3-218ENST00000580391 BCAR3O75815 825 aa19.28■□□□□ 0.68
CDK5RAP3-218ENST00000580391 C20orf194Q5TEA3 1177 aa19.27■□□□□ 0.68
CDK5RAP3-218ENST00000580391 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
CDK5RAP3-218ENST00000580391 ARHGEF25Q86VW2 580 aa19.26■□□□□ 0.67
CDK5RAP3-218ENST00000580391 CAMTA1Q9Y6Y1 1673 aa19.25■□□□□ 0.67
CDK5RAP3-218ENST00000580391 NHSL1Q5SYE7 1610 aa19.25■□□□□ 0.67
CDK5RAP3-218ENST00000580391 LMOD3Q0VAK6 560 aa19.25■□□□□ 0.67
CDK5RAP3-218ENST00000580391 EXOSC9Q06265 439 aaKnown RBP19.24■□□□□ 0.67
CDK5RAP3-218ENST00000580391 DCTN1Q14203 1278 aa19.24■□□□□ 0.67
CDK5RAP3-218ENST00000580391 CRBNQ96SW2 442 aa19.24■□□□□ 0.67
CDK5RAP3-218ENST00000580391 COL18A1P39060 1754 aa19.24■□□□□ 0.67
CDK5RAP3-218ENST00000580391 RARSP54136 660 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-218ENST00000580391 USHBP1Q8N6Y0 703 aa19.23■□□□□ 0.67
CDK5RAP3-218ENST00000580391 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.23■□□□□ 0.67
CDK5RAP3-218ENST00000580391 SLAIN2Q9P270 581 aa19.23■□□□□ 0.67
CDK5RAP3-218ENST00000580391 SPATA31A3Q5VYP0 1347 aa19.23■□□□□ 0.67
CDK5RAP3-218ENST00000580391 LAS1LQ9Y4W2 734 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-218ENST00000580391 ABCA3Q99758 1704 aa19.22■□□□□ 0.67
CDK5RAP3-218ENST00000580391 LRRC37A3O60309 1634 aa19.22■□□□□ 0.67
CDK5RAP3-218ENST00000580391 CALD1Q05682 793 aaKnown RBP19.21■□□□□ 0.67
CDK5RAP3-218ENST00000580391 MTHFSDQ2M296 383 aaKnown RBP19.21■□□□□ 0.67
CDK5RAP3-218ENST00000580391 BCL2L13Q9BXK5 485 aa19.21■□□□□ 0.67
CDK5RAP3-218ENST00000580391 ZC3H6P61129 1189 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-218ENST00000580391 IFT57Q9NWB7 429 aa19.2■□□□□ 0.66
CDK5RAP3-218ENST00000580391 NBPF6Q5VWK0 638 aa19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 CABLES1Q8TDN4 633 aa19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 NBPF4Q96M43 638 aa19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 LMO7Q8WWI1 1683 aa19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 LTBP4Q8N2S1 1624 aa19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 CT47B1P0C2W7 299 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 ZNF853P0CG23 659 aa19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 GNAI1P63096 354 aa19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 LRRC59Q96AG4 307 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 CCDC136Q96JN2 1154 aa19.19■□□□□ 0.66
CDK5RAP3-218ENST00000580391 VIRMAQ69YN4 1812 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-218ENST00000580391 MCM10Q7L590 875 aa19.18■□□□□ 0.66
CDK5RAP3-218ENST00000580391 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
CDK5RAP3-218ENST00000580391 NCAPD2Q15021 1401 aa19.18■□□□□ 0.66
CDK5RAP3-218ENST00000580391 SOS2Q07890 1332 aaPredicted RBP19.18■□□□□ 0.66
CDK5RAP3-218ENST00000580391 MBIPQ9NS73 344 aa19.17■□□□□ 0.66
CDK5RAP3-218ENST00000580391 GAS2L2Q8NHY3 880 aa19.17■□□□□ 0.66
CDK5RAP3-218ENST00000580391 ANKRD24Q8TF21 1146 aa19.17■□□□□ 0.66
CDK5RAP3-218ENST00000580391 ABCC6O95255 1503 aa19.16■□□□□ 0.66
CDK5RAP3-218ENST00000580391 CANXP27824 592 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP3-218ENST00000580391 CFAP44Q96MT7 982 aa19.16■□□□□ 0.66
CDK5RAP3-218ENST00000580391 FAM208AQ9UK61 1670 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms