RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 SLIT2O94813 1529 aa7.1□□□□□ -1.27
GAPLINC-202ENST00000579007 TNS3Q68CZ2 1445 aa7.1□□□□□ -1.27
GAPLINC-202ENST00000579007 ABCC11Q96J66 1382 aa7.09□□□□□ -1.27
GAPLINC-202ENST00000579007 PDE4CQ08493 712 aa7.09□□□□□ -1.27
GAPLINC-202ENST00000579007 RBM26Q5T8P6 1007 aaKnown RBP7.09□□□□□ -1.27
GAPLINC-202ENST00000579007 LRRC59Q96AG4 307 aaKnown RBP7.09□□□□□ -1.27
GAPLINC-202ENST00000579007 TULP4Q9NRJ4 1543 aa7.09□□□□□ -1.27
GAPLINC-202ENST00000579007 THSD7AQ9UPZ6 1657 aa7.09□□□□□ -1.27
GAPLINC-202ENST00000579007 RAB3GAP2Q9H2M9 1393 aa7.08□□□□□ -1.28
GAPLINC-202ENST00000579007 WNK3Q9BYP7 1800 aa7.08□□□□□ -1.28
GAPLINC-202ENST00000579007 COL14A1Q05707 1796 aaKnown RBP7.08□□□□□ -1.28
GAPLINC-202ENST00000579007 ADAMTS2O95450 1211 aa7.08□□□□□ -1.28
GAPLINC-202ENST00000579007 RXRBP28702 533 aa7.08□□□□□ -1.28
GAPLINC-202ENST00000579007 WAPLQ7Z5K2 1190 aa7.08□□□□□ -1.28
GAPLINC-202ENST00000579007 MFRPQ9BY79 579 aa7.08□□□□□ -1.28
GAPLINC-202ENST00000579007 RALGAPBQ86X10 1494 aa7.08□□□□□ -1.28
GAPLINC-202ENST00000579007 NPHP3Q7Z494 1330 aa7.07□□□□□ -1.28
GAPLINC-202ENST00000579007 QRICH2Q9H0J4 1663 aa7.07□□□□□ -1.28
GAPLINC-202ENST00000579007 ATP7BP35670 1465 aa7.07□□□□□ -1.28
GAPLINC-202ENST00000579007 XPCQ01831 940 aaPredicted RBP7.07□□□□□ -1.28
GAPLINC-202ENST00000579007 TMEM132EQ6IEE7 984 aa7.07□□□□□ -1.28
GAPLINC-202ENST00000579007 RETREG2Q8NC44 543 aa7.07□□□□□ -1.28
GAPLINC-202ENST00000579007 MPHOSPH9Q99550 1183 aa7.07□□□□□ -1.28
GAPLINC-202ENST00000579007 NRKQ7Z2Y5 1582 aa7.07□□□□□ -1.28
GAPLINC-202ENST00000579007 RGPD1P0DJD0 1748 aa7.07□□□□□ -1.28
GAPLINC-202ENST00000579007 NUTM2FA1L443 756 aa7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 ABCB7O75027 752 aa7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 RBM6P78332 1123 aaKnown RBP7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 MCM6Q14566 821 aa7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 MFSD10Q14728 455 aa7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 RGL3Q3MIN7 710 aa7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 FNBP4Q8N3X1 1017 aaPredicted RBP7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 FBXW7Q969H0 707 aa7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 ZNF428Q96B54 188 aa7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 STK26Q9P289 416 aa7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 ANKARQ7Z5J8 1434 aa7.06□□□□□ -1.28
GAPLINC-202ENST00000579007 PYGBP11216 843 aa7.05□□□□□ -1.28
GAPLINC-202ENST00000579007 ESCO1Q5FWF5 840 aa7.05□□□□□ -1.28
GAPLINC-202ENST00000579007 LMO7Q8WWI1 1683 aa7.05□□□□□ -1.28
GAPLINC-202ENST00000579007 ATAD2Q6PL18 1390 aa7.05□□□□□ -1.28
GAPLINC-202ENST00000579007 LRP5O75197 1615 aa7.05□□□□□ -1.28
GAPLINC-202ENST00000579007 SPATA31A3Q5VYP0 1347 aa7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 MINK1Q8N4C8 1332 aaPredicted RBP7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 RREB1Q92766 1687 aa7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 FOXO3O43524 673 aa7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 PDE4AP27815 886 aa7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 IRF5Q13568 498 aa7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 AMHR2Q16671 573 aa7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 ZNF467Q7Z7K2 595 aaPredicted RBP7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 QTRT2Q9H974 415 aaKnown RBP7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 USP21Q9UK80 565 aa7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 TRPM1Q7Z4N2 1603 aa7.04□□□□□ -1.28
GAPLINC-202ENST00000579007 CAMK2BQ13554 666 aa7.03□□□□□ -1.28
GAPLINC-202ENST00000579007 CFAP70Q5T0N1 1121 aa7.03□□□□□ -1.28
GAPLINC-202ENST00000579007 NGLY1Q96IV0 654 aa7.03□□□□□ -1.28
GAPLINC-202ENST00000579007 PCMTD1Q96MG8 357 aaPredicted RBP7.03□□□□□ -1.28
GAPLINC-202ENST00000579007 C14orf93Q9H972 538 aaKnown RBP7.03□□□□□ -1.28
GAPLINC-202ENST00000579007 SBNO1A3KN83 1393 aa7.03□□□□□ -1.28
GAPLINC-202ENST00000579007 DHX57Q6P158 1386 aaKnown RBP7.03□□□□□ -1.28
GAPLINC-202ENST00000579007 AKAP12Q02952 1782 aa7.03□□□□□ -1.28
GAPLINC-202ENST00000579007 PRR36Q9H6K5 1346 aa7.02□□□□□ -1.28
GAPLINC-202ENST00000579007 NUP188Q5SRE5 1749 aa7.02□□□□□ -1.29
GAPLINC-202ENST00000579007 PPP1R37O75864 691 aa7.02□□□□□ -1.29
GAPLINC-202ENST00000579007 MLLT3P42568 568 aaPredicted RBP7.02□□□□□ -1.29
GAPLINC-202ENST00000579007 PDAP1Q13442 181 aaKnown RBP7.02□□□□□ -1.29
GAPLINC-202ENST00000579007 RASEFQ8IZ41 740 aa7.02□□□□□ -1.29
GAPLINC-202ENST00000579007 LARP6Q9BRS8 491 aaKnown RBP7.02□□□□□ -1.29
GAPLINC-202ENST00000579007 TRPC5Q9UL62 973 aaPredicted RBP7.02□□□□□ -1.29
GAPLINC-202ENST00000579007 PIK3C2AO00443 1686 aa7.02□□□□□ -1.29
GAPLINC-202ENST00000579007 PRAM1Q96QH2 718 aa7.01□□□□□ -1.29
GAPLINC-202ENST00000579007 SBF2Q86WG5 1849 aa7.01□□□□□ -1.29
GAPLINC-202ENST00000579007 PARP4Q9UKK3 1724 aaKnown RBP7.01□□□□□ -1.29
GAPLINC-202ENST00000579007 LRRC37A3O60309 1634 aa7.01□□□□□ -1.29
GAPLINC-202ENST00000579007 RGPD5Q99666 1765 aa7□□□□□ -1.29
GAPLINC-202ENST00000579007 ARHGEF10O15013 1369 aa7□□□□□ -1.29
GAPLINC-202ENST00000579007 MNX1P50219 401 aaPredicted RBP7□□□□□ -1.29
GAPLINC-202ENST00000579007 SAFB2Q14151 953 aaKnown RBP eCLIP7□□□□□ -1.29
GAPLINC-202ENST00000579007 PARP9Q8IXQ6 854 aa7□□□□□ -1.29
GAPLINC-202ENST00000579007 SIRT1Q96EB6 747 aa7□□□□□ -1.29
GAPLINC-202ENST00000579007 PLSCR2Q9NRY7 297 aa7□□□□□ -1.29
GAPLINC-202ENST00000579007 PHF8Q9UPP1 1060 aa7□□□□□ -1.29
GAPLINC-202ENST00000579007 MON2Q7Z3U7 1717 aa7□□□□□ -1.29
GAPLINC-202ENST00000579007 PEAK1Q9H792 1746 aa6.99□□□□□ -1.29
GAPLINC-202ENST00000579007 KCNA1Q09470 495 aa6.99□□□□□ -1.29
GAPLINC-202ENST00000579007 KRT28Q7Z3Y7 464 aa6.99□□□□□ -1.29
GAPLINC-202ENST00000579007 CABLES1Q8TDN4 633 aa6.99□□□□□ -1.29
GAPLINC-202ENST00000579007 GJD4Q96KN9 370 aaPredicted RBP6.99□□□□□ -1.29
GAPLINC-202ENST00000579007 COL18A1P39060 1754 aa6.99□□□□□ -1.29
GAPLINC-202ENST00000579007 BLMP54132 1417 aaPredicted RBP6.99□□□□□ -1.29
GAPLINC-202ENST00000579007 USP54Q70EL1 1684 aa6.99□□□□□ -1.29
GAPLINC-202ENST00000579007 RGPD3A6NKT7 1758 aaPredicted RBP6.98□□□□□ -1.29
GAPLINC-202ENST00000579007 RGPD4Q7Z3J3 1758 aa6.98□□□□□ -1.29
GAPLINC-202ENST00000579007 GPR37O15354 613 aa6.98□□□□□ -1.29
GAPLINC-202ENST00000579007 NLRP6P59044 892 aa6.98□□□□□ -1.29
GAPLINC-202ENST00000579007 MAP2K5Q13163 448 aa6.98□□□□□ -1.29
GAPLINC-202ENST00000579007 UNC5CLQ8IV45 518 aa6.98□□□□□ -1.29
GAPLINC-202ENST00000579007 DDX27Q96GQ7 796 aaKnown RBP6.98□□□□□ -1.29
GAPLINC-202ENST00000579007 HIRIP3Q9BW71 556 aaPredicted RBP6.98□□□□□ -1.29
GAPLINC-202ENST00000579007 ACIN1Q9UKV3 1341 aaKnown RBP6.98□□□□□ -1.29
GAPLINC-202ENST00000579007 EIF3AQ14152 1382 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms