RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 ABTB2Q8N961 1025 aa35.8■■■■□ 3.32
LIMD2-203ENST00000578067 PAK3O75914 559 aaPredicted RBP35.79■■■■□ 3.32
LIMD2-203ENST00000578067 EXOSC9Q06265 439 aaKnown RBP35.79■■■■□ 3.32
LIMD2-203ENST00000578067 ESCO1Q5FWF5 840 aa35.79■■■■□ 3.32
LIMD2-203ENST00000578067 CALD1Q05682 793 aaKnown RBP35.78■■■■□ 3.32
LIMD2-203ENST00000578067 SULT6B1Q6IMI4 303 aa35.78■■■■□ 3.32
LIMD2-203ENST00000578067 PROSER2Q86WR7 435 aaPredicted RBP35.78■■■■□ 3.32
LIMD2-203ENST00000578067 RBM19Q9Y4C8 960 aaKnown RBP35.77■■■■□ 3.32
LIMD2-203ENST00000578067 LMOD3Q0VAK6 560 aa35.76■■■■□ 3.32
LIMD2-203ENST00000578067 RGPD1P0DJD0 1748 aa35.76■■■■□ 3.32
LIMD2-203ENST00000578067 MARF1Q9Y4F3 1742 aaKnown RBP35.76■■■■□ 3.32
LIMD2-203ENST00000578067 AMPHP49418 695 aa35.76■■■■□ 3.31
LIMD2-203ENST00000578067 NUTM2GQ5VZR2 741 aa35.75■■■■□ 3.31
LIMD2-203ENST00000578067 AEBP1Q8IUX7 1158 aa35.75■■■■□ 3.31
LIMD2-203ENST00000578067 FRAT1Q92837 279 aaPredicted RBP35.75■■■■□ 3.31
LIMD2-203ENST00000578067 PSME1Q06323 249 aa35.73■■■■□ 3.31
LIMD2-203ENST00000578067 KIF24Q5T7B8 1368 aa35.73■■■■□ 3.31
LIMD2-203ENST00000578067 ARHGEF10O15013 1369 aa35.71■■■■□ 3.31
LIMD2-203ENST00000578067 BCL2L13Q9BXK5 485 aa35.71■■■■□ 3.31
LIMD2-203ENST00000578067 THUMPD2Q9BTF0 503 aaKnown RBP35.68■■■■□ 3.3
LIMD2-203ENST00000578067 PANK1Q8TE04 598 aa35.67■■■■□ 3.3
LIMD2-203ENST00000578067 IFT57Q9NWB7 429 aa35.67■■■■□ 3.3
LIMD2-203ENST00000578067 DLG5Q8TDM6 1919 aa35.67■■■■□ 3.3
LIMD2-203ENST00000578067 GNAI1P63096 354 aa35.67■■■■□ 3.3
LIMD2-203ENST00000578067 ORAI2Q96SN7 254 aa35.66■■■■□ 3.3
LIMD2-203ENST00000578067 LAS1LQ9Y4W2 734 aaKnown RBP35.66■■■■□ 3.3
LIMD2-203ENST00000578067 C19orf44Q9H6X5 657 aa35.66■■■■□ 3.3
LIMD2-203ENST00000578067 ZNF853P0CG23 659 aa35.64■■■■□ 3.3
LIMD2-203ENST00000578067 HOXC9P31274 260 aa35.64■■■■□ 3.3
LIMD2-203ENST00000578067 KDM2BQ8NHM5 1336 aa35.63■■■■□ 3.29
LIMD2-203ENST00000578067 SMC4Q9NTJ3 1288 aa35.63■■■■□ 3.29
LIMD2-203ENST00000578067 COG6Q9Y2V7 657 aa35.63■■■■□ 3.29
LIMD2-203ENST00000578067 IGSF1Q8N6C5 1336 aa35.61■■■■□ 3.29
LIMD2-203ENST00000578067 CENPQQ7L2Z9 268 aaPredicted RBP35.61■■■■□ 3.29
LIMD2-203ENST00000578067 SSH1Q8WYL5 1049 aa35.61■■■■□ 3.29
LIMD2-203ENST00000578067 ZKSCAN2Q63HK3 967 aa35.61■■■■□ 3.29
LIMD2-203ENST00000578067 KDRP35968 1356 aa35.6■■■■□ 3.29
LIMD2-203ENST00000578067 EYA1Q99502 592 aa35.6■■■■□ 3.29
LIMD2-203ENST00000578067 FAM83GA6ND36 823 aa35.59■■■■□ 3.29
LIMD2-203ENST00000578067 CFAP44Q96MT7 982 aa35.59■■■■□ 3.29
LIMD2-203ENST00000578067 FOXO3O43524 673 aa35.59■■■■□ 3.29
LIMD2-203ENST00000578067 RTL1A6NKG5 1358 aa35.58■■■■□ 3.29
LIMD2-203ENST00000578067 C1orf167Q5SNV9 1468 aa35.58■■■■□ 3.29
LIMD2-203ENST00000578067 HSPA2P54652 639 aa35.58■■■■□ 3.29
LIMD2-203ENST00000578067 ZNF428Q96B54 188 aa35.58■■■■□ 3.29
LIMD2-203ENST00000578067 TNNQ9UQP3 1299 aa35.57■■■■□ 3.29
LIMD2-203ENST00000578067 MS4A1P11836 297 aa35.57■■■■□ 3.28
LIMD2-203ENST00000578067 RLBP1P12271 317 aa35.57■■■■□ 3.28
LIMD2-203ENST00000578067 AAMPQ13685 434 aa35.57■■■■□ 3.28
LIMD2-203ENST00000578067 ALDH1L2Q3SY69 923 aa35.57■■■■□ 3.28
LIMD2-203ENST00000578067 MBIPQ9NS73 344 aa35.56■■■■□ 3.28
LIMD2-203ENST00000578067 NCOA3Q9Y6Q9 1424 aa35.55■■■■□ 3.28
LIMD2-203ENST00000578067 TMEM94Q12767 1356 aa35.55■■■■□ 3.28
LIMD2-203ENST00000578067 TCERG1O14776 1098 aaKnown RBP35.55■■■■□ 3.28
LIMD2-203ENST00000578067 DCTN1Q14203 1278 aa35.55■■■■□ 3.28
LIMD2-203ENST00000578067 KCNH5Q8NCM2 988 aa35.55■■■■□ 3.28
LIMD2-203ENST00000578067 CLUAP1Q96AJ1 413 aa35.55■■■■□ 3.28
LIMD2-203ENST00000578067 NFAT5O94916 1531 aa35.54■■■■□ 3.28
LIMD2-203ENST00000578067 KIF1AQ12756 1690 aa35.53■■■■□ 3.28
LIMD2-203ENST00000578067 STRCP1A6NGW2 1772 aa35.53■■■■□ 3.28
LIMD2-203ENST00000578067 DZIP1LQ8IYY4 767 aaKnown RBP35.52■■■■□ 3.28
LIMD2-203ENST00000578067 ATF3P18847 181 aa35.51■■■■□ 3.28
LIMD2-203ENST00000578067 IP6K1Q92551 441 aa35.5■■■■□ 3.27
LIMD2-203ENST00000578067 DCCP43146 1447 aa35.5■■■■□ 3.27
LIMD2-203ENST00000578067 LTN1O94822 1766 aa35.5■■■■□ 3.27
LIMD2-203ENST00000578067 VAMP4O75379 141 aa35.5■■■■□ 3.27
LIMD2-203ENST00000578067 XPCQ01831 940 aaPredicted RBP35.5■■■■□ 3.27
LIMD2-203ENST00000578067 KIF16BQ96L93 1317 aa35.5■■■■□ 3.27
LIMD2-203ENST00000578067 KDM4FA0A1W2PPD8 638 aa35.49■■■■□ 3.27
LIMD2-203ENST00000578067 FTSJ3Q8IY81 847 aaKnown RBP35.49■■■■□ 3.27
LIMD2-203ENST00000578067 KRT28Q7Z3Y7 464 aa35.49■■■■□ 3.27
LIMD2-203ENST00000578067 NOB1Q9ULX3 412 aaKnown RBP35.49■■■■□ 3.27
LIMD2-203ENST00000578067 MTHFSDQ2M296 383 aaKnown RBP35.48■■■■□ 3.27
LIMD2-203ENST00000578067 ATF7IPQ6VMQ6 1270 aa35.48■■■■□ 3.27
LIMD2-203ENST00000578067 BRPF1P55201 1214 aaPredicted RBP35.47■■■■□ 3.27
LIMD2-203ENST00000578067 TRIM27P14373 513 aa35.47■■■■□ 3.27
LIMD2-203ENST00000578067 MVPQ14764 893 aaKnown RBP35.47■■■■□ 3.27
LIMD2-203ENST00000578067 MST1RQ04912 1400 aa35.46■■■■□ 3.27
LIMD2-203ENST00000578067 IPO8O15397 1037 aaKnown RBP35.46■■■■□ 3.27
LIMD2-203ENST00000578067 TRPM3Q9HCF6 1732 aaPredicted RBP35.46■■■■□ 3.27
LIMD2-203ENST00000578067 MCM10Q7L590 875 aa35.45■■■■□ 3.27
LIMD2-203ENST00000578067 TSPYL6Q8N831 410 aa35.45■■■■□ 3.27
LIMD2-203ENST00000578067 GAS2L2Q8NHY3 880 aa35.45■■■■□ 3.27
LIMD2-203ENST00000578067 LTV1Q96GA3 475 aaPredicted RBP35.45■■■■□ 3.27
LIMD2-203ENST00000578067 SLIT3O75094 1523 aa35.43■■■■□ 3.26
LIMD2-203ENST00000578067 LMTK3Q96Q04 1460 aa35.43■■■■□ 3.26
LIMD2-203ENST00000578067 TWISTNBQ3B726 338 aaPredicted RBP35.42■■■■□ 3.26
LIMD2-203ENST00000578067 PHRF1Q9P1Y6 1649 aaKnown RBP35.42■■■■□ 3.26
LIMD2-203ENST00000578067 CHL1O00533 1208 aa35.42■■■■□ 3.26
LIMD2-203ENST00000578067 GCP02774 474 aa35.42■■■■□ 3.26
LIMD2-203ENST00000578067 C8orf58Q8NAV2 365 aa35.41■■■■□ 3.26
LIMD2-203ENST00000578067 RTF1Q92541 710 aaKnown RBP35.4■■■■□ 3.26
LIMD2-203ENST00000578067 LMOD2Q6P5Q4 547 aa35.4■■■■□ 3.26
LIMD2-203ENST00000578067 USP19O94966 1318 aa35.39■■■■□ 3.26
LIMD2-203ENST00000578067 IGHDP01880 384 aa35.39■■■■□ 3.26
LIMD2-203ENST00000578067 CADPS2Q86UW7 1296 aa35.39■■■■□ 3.26
LIMD2-203ENST00000578067 CRB1P82279 1406 aa35.39■■■■□ 3.26
LIMD2-203ENST00000578067 ELL2O00472 640 aaPredicted RBP35.39■■■■□ 3.26
LIMD2-203ENST00000578067 MRPL50Q8N5N7 158 aaKnown RBP35.38■■■■□ 3.25
LIMD2-203ENST00000578067 HTATSF1O43719 755 aaKnown RBP35.37■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms