RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 PARD3Q8TEW0 1356 aa5.71□□□□□ -1.5
NF1-218ENST00000577967 FYB1O15117 783 aa5.71□□□□□ -1.5
NF1-218ENST00000577967 PRDM11Q9NQV5 511 aa5.71□□□□□ -1.5
NF1-218ENST00000577967 GNAI2P04899 355 aa5.7□□□□□ -1.5
NF1-218ENST00000577967 AMER1Q5JTC6 1135 aaPredicted RBP5.7□□□□□ -1.5
NF1-218ENST00000577967 MPRIPQ6WCQ1 1025 aa5.7□□□□□ -1.5
NF1-218ENST00000577967 KDM5DQ9BY66 1539 aa5.7□□□□□ -1.5
NF1-218ENST00000577967 A0A1W2PP64 1363 aa5.7□□□□□ -1.5
NF1-218ENST00000577967 INTS3Q68E01 1043 aaKnown RBP5.7□□□□□ -1.5
NF1-218ENST00000577967 DUSP27Q5VZP5 1158 aa5.7□□□□□ -1.5
NF1-218ENST00000577967 RARSP54136 660 aaKnown RBP5.7□□□□□ -1.5
NF1-218ENST00000577967 SIL1Q9H173 461 aa5.7□□□□□ -1.5
NF1-218ENST00000577967 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.7□□□□□ -1.5
NF1-218ENST00000577967 TRPM2O94759 1503 aa5.7□□□□□ -1.5
NF1-218ENST00000577967 SURF6O75683 361 aaKnown RBP5.7□□□□□ -1.5
NF1-218ENST00000577967 TTC21BQ7Z4L5 1316 aa5.7□□□□□ -1.5
NF1-218ENST00000577967 CDC45O75419 566 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 CCT4P50991 539 aaKnown RBP5.69□□□□□ -1.5
NF1-218ENST00000577967 AAMPQ13685 434 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 C22orf23Q9BZE7 217 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 CT47B1P0C2W7 299 aaPredicted RBP5.69□□□□□ -1.5
NF1-218ENST00000577967 DNAJC2Q99543 621 aaKnown RBP5.69□□□□□ -1.5
NF1-218ENST00000577967 CLASP1Q7Z460 1538 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 IQGAP3Q86VI3 1631 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 GNAI3P08754 354 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 SSH1Q8WYL5 1049 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 PLXNC1O60486 1568 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 DNTTIP2Q5QJE6 756 aaKnown RBP5.69□□□□□ -1.5
NF1-218ENST00000577967 CEP152O94986 1710 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 ADAMTS2O95450 1211 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 APPP05067 770 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 PTMSP20962 102 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 FOSBP53539 338 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 L1TD1Q5T7N2 865 aaKnown RBP5.69□□□□□ -1.5
NF1-218ENST00000577967 VPS37DQ86XT2 251 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 DRC7Q8IY82 874 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 MBIPQ9NS73 344 aa5.69□□□□□ -1.5
NF1-218ENST00000577967 HSP90AB4PQ58FF6 505 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 RUFY2Q8WXA3 655 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 GCC1Q96CN9 775 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 ERC2O15083 957 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 REC8O95072 547 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 CHRNA2Q15822 529 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 ANKRD24Q8TF21 1146 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 TET3O43151 1660 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 CLTCL1P53675 1640 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
NF1-218ENST00000577967 HSP90AB2PQ58FF8 381 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 SRCIN1Q9C0H9 1055 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 SPHKAPQ2M3C7 1700 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 F6X3S4 739 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 HSPA2P54652 639 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 TAF7Q15545 349 aaPredicted RBP5.68□□□□□ -1.5
NF1-218ENST00000577967 CHD1LQ86WJ1 897 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 CNTROBQ8N137 903 aa5.68□□□□□ -1.5
NF1-218ENST00000577967 AEBP1Q8IUX7 1158 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 LRPPRCP42704 1394 aaKnown RBP5.67□□□□□ -1.5
NF1-218ENST00000577967 PLEKHH1Q9ULM0 1364 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 H3BQV1 296 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 IFFO2Q5TF58 517 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 LRRCC1Q9C099 1032 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 KDM4AO75164 1064 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 UNC13BO14795 1591 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 ABCC11Q96J66 1382 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 EIF4A2Q14240 407 aaKnown RBP5.67□□□□□ -1.5
NF1-218ENST00000577967 TTC39AQ5SRH9 613 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 FSD1Q9BTV5 496 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 GOLGA6L6A8MZA4 724 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 WASHC4Q2M389 1173 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 ALDH1L2Q3SY69 923 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 CABLES1Q8TDN4 633 aa5.67□□□□□ -1.5
NF1-218ENST00000577967 MSH6P52701 1360 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 TTC21AQ8NDW8 1320 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 CDK11BP21127 795 aaKnown RBP5.66□□□□□ -1.5
NF1-218ENST00000577967 NUTM1Q86Y26 1132 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 MYD88Q99836 296 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 POLKQ9UBT6 870 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 PRDM15P57071 1507 aaPredicted RBP5.66□□□□□ -1.5
NF1-218ENST00000577967 KCNA6P17658 529 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 LRRC59Q96AG4 307 aaKnown RBP5.66□□□□□ -1.5
NF1-218ENST00000577967 GOLGA6L3A6NEY3 463 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 CCDC27Q2M243 656 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 FAM184AQ8NB25 1140 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 TMOD3Q9NYL9 352 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 AMOTQ4VCS5 1084 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 BICDL1Q6ZP65 573 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 KLHL34Q8N239 644 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 CCDC85AQ96PX6 553 aaPredicted RBP5.66□□□□□ -1.5
NF1-218ENST00000577967 SPINK5Q9NQ38 1064 aaPredicted RBP5.66□□□□□ -1.5
NF1-218ENST00000577967 CNNM1Q9NRU3 951 aa5.66□□□□□ -1.5
NF1-218ENST00000577967 PTCD1O75127 700 aaKnown RBP5.65□□□□□ -1.5
NF1-218ENST00000577967 POLR3AO14802 1390 aaPredicted RBP5.65□□□□□ -1.5
NF1-218ENST00000577967 PER1O15534 1290 aaPredicted RBP5.65□□□□□ -1.5
NF1-218ENST00000577967 TRIM27P14373 513 aa5.65□□□□□ -1.5
NF1-218ENST00000577967 MCTP1Q6DN14 999 aa5.65□□□□□ -1.5
NF1-218ENST00000577967 AACSQ86V21 672 aa5.65□□□□□ -1.5
NF1-218ENST00000577967 NAP1L5Q96NT1 182 aaPredicted RBP5.65□□□□□ -1.5
NF1-218ENST00000577967 IL1RAPL2Q9NP60 686 aa5.65□□□□□ -1.5
NF1-218ENST00000577967 TRPM1Q7Z4N2 1603 aa5.65□□□□□ -1.5
NF1-218ENST00000577967 ABCC3O15438 1527 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms