RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 RNF17Q9BXT8 1623 aaKnown RBP18.88■□□□□ 0.61
USP43-202ENST00000570475 GAS2L3Q86XJ1 694 aa18.88■□□□□ 0.61
USP43-202ENST00000570475 ABCC11Q96J66 1382 aa18.88■□□□□ 0.61
USP43-202ENST00000570475 EXOC6BQ9Y2D4 811 aa18.88■□□□□ 0.61
USP43-202ENST00000570475 NSD2O96028 1365 aa18.87■□□□□ 0.61
USP43-202ENST00000570475 ST18O60284 1047 aa18.87■□□□□ 0.61
USP43-202ENST00000570475 CLASP1Q7Z460 1538 aa18.86■□□□□ 0.61
USP43-202ENST00000570475 SKOR2Q2VWA4 1001 aaPredicted RBP18.86■□□□□ 0.61
USP43-202ENST00000570475 NUDT16Q96DE0 195 aaKnown RBP18.86■□□□□ 0.61
USP43-202ENST00000570475 NEK4P51957 841 aa18.86■□□□□ 0.61
USP43-202ENST00000570475 INTS3Q68E01 1043 aaKnown RBP18.86■□□□□ 0.61
USP43-202ENST00000570475 ANO2Q9NQ90 1003 aa18.86■□□□□ 0.61
USP43-202ENST00000570475 MYOM2P54296 1465 aa18.85■□□□□ 0.61
USP43-202ENST00000570475 HSP90AA2PQ14568 343 aaPredicted RBP18.85■□□□□ 0.61
USP43-202ENST00000570475 SIRT2Q8IXJ6 389 aa18.85■□□□□ 0.61
USP43-202ENST00000570475 MEIS3Q99687 375 aa18.85■□□□□ 0.61
USP43-202ENST00000570475 IL16Q14005 1332 aa18.85■□□□□ 0.61
USP43-202ENST00000570475 FAM69CQ0P6D2 419 aa18.85■□□□□ 0.61
USP43-202ENST00000570475 TSPYL4Q9UJ04 414 aa18.85■□□□□ 0.61
USP43-202ENST00000570475 TET3O43151 1660 aa18.84■□□□□ 0.61
USP43-202ENST00000570475 FKBP5Q13451 457 aaPredicted RBP18.84■□□□□ 0.61
USP43-202ENST00000570475 IFT57Q9NWB7 429 aa18.84■□□□□ 0.61
USP43-202ENST00000570475 RBM25P49756 843 aaKnown RBP18.83■□□□□ 0.61
USP43-202ENST00000570475 RBM27Q9P2N5 1060 aaKnown RBP18.83■□□□□ 0.61
USP43-202ENST00000570475 STK31Q9BXU1 1019 aa18.83■□□□□ 0.6
USP43-202ENST00000570475 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.6
USP43-202ENST00000570475 AMPHP49418 695 aa18.83■□□□□ 0.6
USP43-202ENST00000570475 PKP1Q13835 747 aa18.83■□□□□ 0.6
USP43-202ENST00000570475 ZGPATQ8N5A5 531 aaKnown RBP18.83■□□□□ 0.6
USP43-202ENST00000570475 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
USP43-202ENST00000570475 GLIPR1L2Q4G1C9 344 aa18.82■□□□□ 0.6
USP43-202ENST00000570475 DTNBO60941 627 aa18.82■□□□□ 0.6
USP43-202ENST00000570475 BAG4O95429 457 aaKnown RBP18.82■□□□□ 0.6
USP43-202ENST00000570475 PLEKHM2Q8IWE5 1019 aa18.82■□□□□ 0.6
USP43-202ENST00000570475 VSIG10Q8N0Z9 540 aa18.82■□□□□ 0.6
USP43-202ENST00000570475 KIF1BO60333 1816 aa18.81■□□□□ 0.6
USP43-202ENST00000570475 FOXO3O43524 673 aa18.81■□□□□ 0.6
USP43-202ENST00000570475 HMMRO75330 724 aa18.81■□□□□ 0.6
USP43-202ENST00000570475 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
USP43-202ENST00000570475 MYOM1P52179 1685 aa18.81■□□□□ 0.6
USP43-202ENST00000570475 GSPT1P15170 499 aaKnown RBP18.81■□□□□ 0.6
USP43-202ENST00000570475 SDSP20132 328 aa18.81■□□□□ 0.6
USP43-202ENST00000570475 RAB3GAP1Q15042 981 aa18.81■□□□□ 0.6
USP43-202ENST00000570475 DNTTIP2Q5QJE6 756 aaKnown RBP18.81■□□□□ 0.6
USP43-202ENST00000570475 CEP152O94986 1710 aa18.81■□□□□ 0.6
USP43-202ENST00000570475 NGDNQ8NEJ9 315 aaKnown RBP18.8■□□□□ 0.6
USP43-202ENST00000570475 PPIP5K1Q6PFW1 1433 aa18.8■□□□□ 0.6
USP43-202ENST00000570475 EIF2S2P20042 333 aaKnown RBP18.8■□□□□ 0.6
USP43-202ENST00000570475 RABEP1Q15276 862 aa18.8■□□□□ 0.6
USP43-202ENST00000570475 LARP6Q9BRS8 491 aaKnown RBP18.8■□□□□ 0.6
USP43-202ENST00000570475 UPF3BQ9BZI7 483 aaKnown RBP18.8■□□□□ 0.6
USP43-202ENST00000570475 OS9Q13438 667 aaPredicted RBP18.79■□□□□ 0.6
USP43-202ENST00000570475 SNX21Q969T3 373 aa18.79■□□□□ 0.6
USP43-202ENST00000570475 CIZ1Q9ULV3 898 aaPredicted RBP18.79■□□□□ 0.6
USP43-202ENST00000570475 IL1RAPL2Q9NP60 686 aa18.79■□□□□ 0.6
USP43-202ENST00000570475 NLRP1Q9C000 1473 aa18.79■□□□□ 0.6
USP43-202ENST00000570475 REC8O95072 547 aa18.79■□□□□ 0.6
USP43-202ENST00000570475 SLC26A8Q96RN1 970 aa18.79■□□□□ 0.6
USP43-202ENST00000570475 CCDC61Q9Y6R9 512 aa18.79■□□□□ 0.6
USP43-202ENST00000570475 FSD2A1L4K1 749 aa18.78■□□□□ 0.6
USP43-202ENST00000570475 WASLO00401 505 aaPredicted RBP18.78■□□□□ 0.6
USP43-202ENST00000570475 EFCAB6Q5THR3 1501 aa18.78■□□□□ 0.6
USP43-202ENST00000570475 TTC22Q5TAA0 569 aa18.78■□□□□ 0.6
USP43-202ENST00000570475 NUCB2P80303 420 aa18.77■□□□□ 0.6
USP43-202ENST00000570475 RBM10P98175 930 aaKnown RBP18.77■□□□□ 0.6
USP43-202ENST00000570475 LMOD2Q6P5Q4 547 aa18.77■□□□□ 0.6
USP43-202ENST00000570475 GDPD2Q9HCC8 539 aa18.77■□□□□ 0.6
USP43-202ENST00000570475 YTHDC2Q9H6S0 1430 aaKnown RBP18.77■□□□□ 0.6
USP43-202ENST00000570475 IL13P35225 146 aa18.77■□□□□ 0.6
USP43-202ENST00000570475 SHROOM2Q13796 1616 aa18.76■□□□□ 0.59
USP43-202ENST00000570475 HAP1P54257 671 aaPredicted RBP18.75■□□□□ 0.59
USP43-202ENST00000570475 G2E3Q7L622 706 aa18.75■□□□□ 0.59
USP43-202ENST00000570475 IQSEC2Q5JU85 1478 aa18.75■□□□□ 0.59
USP43-202ENST00000570475 CLCN1P35523 988 aa18.75■□□□□ 0.59
USP43-202ENST00000570475 SYCE3A1L190 88 aa18.75■□□□□ 0.59
USP43-202ENST00000570475 MCCP23508 829 aa18.75■□□□□ 0.59
USP43-202ENST00000570475 KIF2CQ99661 725 aa18.74■□□□□ 0.59
USP43-202ENST00000570475 R3HCC1Q9Y3T6 440 aaKnown RBP18.74■□□□□ 0.59
USP43-202ENST00000570475 PTMSP20962 102 aa18.74■□□□□ 0.59
USP43-202ENST00000570475 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
USP43-202ENST00000570475 ZNF692Q9BU19 519 aaPredicted RBP18.74■□□□□ 0.59
USP43-202ENST00000570475 UHRF1BP1LA0JNW5 1464 aa18.73■□□□□ 0.59
USP43-202ENST00000570475 ARHGAP45Q92619 1136 aa18.73■□□□□ 0.59
USP43-202ENST00000570475 ERC2O15083 957 aa18.73■□□□□ 0.59
USP43-202ENST00000570475 EIF4A2Q14240 407 aaKnown RBP18.73■□□□□ 0.59
USP43-202ENST00000570475 DCTPP1Q9H773 170 aa18.73■□□□□ 0.59
USP43-202ENST00000570475 ERBB4Q15303 1308 aa18.73■□□□□ 0.59
USP43-202ENST00000570475 FAM13BQ9NYF5 915 aa18.73■□□□□ 0.59
USP43-202ENST00000570475 PPRC1Q5VV67 1664 aaKnown RBP18.72■□□□□ 0.59
USP43-202ENST00000570475 TULP4Q9NRJ4 1543 aa18.72■□□□□ 0.59
USP43-202ENST00000570475 CEP85Q6P2H3 762 aa18.72■□□□□ 0.59
USP43-202ENST00000570475 KIAA1211Q6ZU35 1233 aa18.72■□□□□ 0.59
USP43-202ENST00000570475 CHMP3Q9Y3E7 222 aa18.72■□□□□ 0.59
USP43-202ENST00000570475 QRICH2Q9H0J4 1663 aa18.72■□□□□ 0.59
USP43-202ENST00000570475 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
USP43-202ENST00000570475 USP26Q9BXU7 913 aa18.71■□□□□ 0.59
USP43-202ENST00000570475 NUTM1Q86Y26 1132 aa18.71■□□□□ 0.59
USP43-202ENST00000570475 RPAP2Q8IXW5 612 aaPredicted RBP18.71■□□□□ 0.59
USP43-202ENST00000570475 ANKRD44Q8N8A2 993 aa18.71■□□□□ 0.59
USP43-202ENST00000570475 YEATS2Q9ULM3 1422 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms