RNA–Protein interactions for RNA: ENST00000570138.5

EDC3-218, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-218ENST00000570138 IP6K1Q92551 441 aa12.04□□□□□ -0.48
EDC3-218ENST00000570138 USP19O94966 1318 aa12.04□□□□□ -0.48
EDC3-218ENST00000570138 FLT4P35916 1363 aa12.04□□□□□ -0.48
EDC3-218ENST00000570138 PRKAR2BP31323 418 aa12.03□□□□□ -0.48
EDC3-218ENST00000570138 TMPOP42166 694 aaKnown RBP12.03□□□□□ -0.48
EDC3-218ENST00000570138 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
EDC3-218ENST00000570138 ARHGEF25Q86VW2 580 aa12.03□□□□□ -0.48
EDC3-218ENST00000570138 WWC1Q8IX03 1113 aa12.03□□□□□ -0.48
EDC3-218ENST00000570138 SUPT16HQ9Y5B9 1047 aaKnown RBP12.03□□□□□ -0.48
EDC3-218ENST00000570138 SPATA31A3Q5VYP0 1347 aa12.03□□□□□ -0.48
EDC3-218ENST00000570138 KIF1AQ12756 1690 aa12.03□□□□□ -0.48
EDC3-218ENST00000570138 KIF24Q5T7B8 1368 aa12.03□□□□□ -0.48
EDC3-218ENST00000570138 XIRP1Q702N8 1843 aaKnown RBP12.02□□□□□ -0.48
EDC3-218ENST00000570138 ZBTB7CA1YPR0 619 aa12.02□□□□□ -0.49
EDC3-218ENST00000570138 SLFN5Q08AF3 891 aa12.02□□□□□ -0.49
EDC3-218ENST00000570138 CCDC27Q2M243 656 aa12.02□□□□□ -0.49
EDC3-218ENST00000570138 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.49
EDC3-218ENST00000570138 MAPK8IP3Q9UPT6 1336 aa12.02□□□□□ -0.49
EDC3-218ENST00000570138 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
EDC3-218ENST00000570138 NEFMP07197 916 aa12.01□□□□□ -0.49
EDC3-218ENST00000570138 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
EDC3-218ENST00000570138 WDR63Q8IWG1 891 aa12.01□□□□□ -0.49
EDC3-218ENST00000570138 TRMT2AQ8IZ69 625 aaKnown RBP12.01□□□□□ -0.49
EDC3-218ENST00000570138 PHACTR3Q96KR7 559 aa12.01□□□□□ -0.49
EDC3-218ENST00000570138 RIPK4P57078 832 aa12□□□□□ -0.49
EDC3-218ENST00000570138 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
EDC3-218ENST00000570138 LTV1Q96GA3 475 aaPredicted RBP12□□□□□ -0.49
EDC3-218ENST00000570138 EYA1Q99502 592 aa12□□□□□ -0.49
EDC3-218ENST00000570138 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
EDC3-218ENST00000570138 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
EDC3-218ENST00000570138 PXDNQ92626 1479 aa12□□□□□ -0.49
EDC3-218ENST00000570138 E9PSI1 815 aa11.99□□□□□ -0.49
EDC3-218ENST00000570138 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
EDC3-218ENST00000570138 NFE2L2Q16236 605 aa11.99□□□□□ -0.49
EDC3-218ENST00000570138 DUSP27Q5VZP5 1158 aa11.99□□□□□ -0.49
EDC3-218ENST00000570138 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
EDC3-218ENST00000570138 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
EDC3-218ENST00000570138 RTL1A6NKG5 1358 aa11.99□□□□□ -0.49
EDC3-218ENST00000570138 TNS3Q68CZ2 1445 aa11.99□□□□□ -0.49
EDC3-218ENST00000570138 USP54Q70EL1 1684 aa11.99□□□□□ -0.49
EDC3-218ENST00000570138 PEAK1Q9H792 1746 aa11.98□□□□□ -0.49
EDC3-218ENST00000570138 TRPM3Q9HCF6 1732 aaPredicted RBP11.98□□□□□ -0.49
EDC3-218ENST00000570138 SLIT3O75094 1523 aa11.98□□□□□ -0.49
EDC3-218ENST00000570138 NFAT5O94916 1531 aa11.98□□□□□ -0.49
EDC3-218ENST00000570138 ARHGEF10O15013 1369 aa11.98□□□□□ -0.49
EDC3-218ENST00000570138 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
EDC3-218ENST00000570138 MARF1Q9Y4F3 1742 aaKnown RBP11.97□□□□□ -0.49
EDC3-218ENST00000570138 TOM1O60784 492 aa11.96□□□□□ -0.49
EDC3-218ENST00000570138 NEFLP07196 543 aa11.96□□□□□ -0.49
EDC3-218ENST00000570138 RCAN3Q9UKA8 241 aa11.96□□□□□ -0.49
EDC3-218ENST00000570138 FKBP8Q14318 412 aa11.95□□□□□ -0.5
EDC3-218ENST00000570138 NBPF6Q5VWK0 638 aa11.95□□□□□ -0.5
EDC3-218ENST00000570138 NBPF4Q96M43 638 aa11.95□□□□□ -0.5
EDC3-218ENST00000570138 AXIN2Q9Y2T1 843 aa11.95□□□□□ -0.5
EDC3-218ENST00000570138 RNF123Q5XPI4 1314 aa11.94□□□□□ -0.5
EDC3-218ENST00000570138 ANKRD24Q8TF21 1146 aa11.94□□□□□ -0.5
EDC3-218ENST00000570138 IL16Q14005 1332 aa11.93□□□□□ -0.5
EDC3-218ENST00000570138 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
EDC3-218ENST00000570138 LRRC59Q96AG4 307 aaKnown RBP11.93□□□□□ -0.5
EDC3-218ENST00000570138 ALS2Q96Q42 1657 aa11.93□□□□□ -0.5
EDC3-218ENST00000570138 KDRP35968 1356 aa11.92□□□□□ -0.5
EDC3-218ENST00000570138 LMOD3Q0VAK6 560 aa11.92□□□□□ -0.5
EDC3-218ENST00000570138 CHRNA2Q15822 529 aa11.92□□□□□ -0.5
EDC3-218ENST00000570138 MTHFSDQ2M296 383 aaKnown RBP11.92□□□□□ -0.5
EDC3-218ENST00000570138 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
EDC3-218ENST00000570138 IRX6P78412 446 aaPredicted RBP11.91□□□□□ -0.5
EDC3-218ENST00000570138 CPDO75976 1380 aa11.91□□□□□ -0.5
EDC3-218ENST00000570138 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.5
EDC3-218ENST00000570138 CALD1Q05682 793 aaKnown RBP11.9□□□□□ -0.5
EDC3-218ENST00000570138 GAS2L2Q8NHY3 880 aa11.9□□□□□ -0.5
EDC3-218ENST00000570138 THUMPD2Q9BTF0 503 aaKnown RBP11.9□□□□□ -0.5
EDC3-218ENST00000570138 RGS17Q9UGC6 210 aaPredicted RBP11.9□□□□□ -0.5
EDC3-218ENST00000570138 KIAA0232Q92628 1395 aa11.9□□□□□ -0.5
EDC3-218ENST00000570138 FAM83GA6ND36 823 aa11.89□□□□□ -0.51
EDC3-218ENST00000570138 DCTN1Q14203 1278 aa11.89□□□□□ -0.51
EDC3-218ENST00000570138 PRDM11Q9NQV5 511 aa11.89□□□□□ -0.51
EDC3-218ENST00000570138 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
EDC3-218ENST00000570138 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
EDC3-218ENST00000570138 ZNF853P0CG23 659 aa11.88□□□□□ -0.51
EDC3-218ENST00000570138 RRP1P56182 461 aaKnown RBP11.88□□□□□ -0.51
EDC3-218ENST00000570138 TSR2Q969E8 191 aaKnown RBP11.88□□□□□ -0.51
EDC3-218ENST00000570138 NLRP2Q9NX02 1062 aa11.88□□□□□ -0.51
EDC3-218ENST00000570138 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
EDC3-218ENST00000570138 ERBB3P21860 1342 aa11.87□□□□□ -0.51
EDC3-218ENST00000570138 FANCIQ9NVI1 1328 aa11.87□□□□□ -0.51
EDC3-218ENST00000570138 CSB-PGBD3P0DP91 1061 aa11.87□□□□□ -0.51
EDC3-218ENST00000570138 GNAI1P63096 354 aa11.87□□□□□ -0.51
EDC3-218ENST00000570138 EXOSC9Q06265 439 aaKnown RBP11.87□□□□□ -0.51
EDC3-218ENST00000570138 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
EDC3-218ENST00000570138 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
EDC3-218ENST00000570138 IFT57Q9NWB7 429 aa11.87□□□□□ -0.51
EDC3-218ENST00000570138 MCM10Q7L590 875 aa11.86□□□□□ -0.51
EDC3-218ENST00000570138 RTF1Q92541 710 aaKnown RBP11.86□□□□□ -0.51
EDC3-218ENST00000570138 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
EDC3-218ENST00000570138 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
EDC3-218ENST00000570138 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
EDC3-218ENST00000570138 GNAT3A8MTJ3 354 aa11.85□□□□□ -0.51
EDC3-218ENST00000570138 CT47B1P0C2W7 299 aaPredicted RBP11.85□□□□□ -0.51
EDC3-218ENST00000570138 AMOTQ4VCS5 1084 aa11.85□□□□□ -0.51
EDC3-218ENST00000570138 NCAPD2Q15021 1401 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms