RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 CDK12Q9NYV4 1490 aaPredicted RBP7.8□□□□□ -1.16
CYLD-216ENST00000569891 DMRT2Q9Y5R5 561 aa7.8□□□□□ -1.16
CYLD-216ENST00000569891 TNRC18O15417 2968 aaPredicted RBP7.8□□□□□ -1.16
CYLD-216ENST00000569891 NKTRP30414 1462 aaKnown RBP7.8□□□□□ -1.16
CYLD-216ENST00000569891 CD163L1Q9NR16 1453 aa7.8□□□□□ -1.16
CYLD-216ENST00000569891 TCP11L2Q8N4U5 519 aa7.79□□□□□ -1.16
CYLD-216ENST00000569891 PHF8Q9UPP1 1060 aa7.79□□□□□ -1.16
CYLD-216ENST00000569891 USP6P35125 1406 aa7.79□□□□□ -1.16
CYLD-216ENST00000569891 ADGRL3Q9HAR2 1447 aa7.79□□□□□ -1.16
CYLD-216ENST00000569891 AMPHP49418 695 aa7.79□□□□□ -1.16
CYLD-216ENST00000569891 CCDC146Q8IYE0 955 aa7.79□□□□□ -1.16
CYLD-216ENST00000569891 SLFN5Q08AF3 891 aa7.79□□□□□ -1.16
CYLD-216ENST00000569891 COL16A1Q07092 1604 aaPredicted RBP7.79□□□□□ -1.16
CYLD-216ENST00000569891 PNPLA6Q8IY17 1366 aa7.78□□□□□ -1.16
CYLD-216ENST00000569891 RNF123Q5XPI4 1314 aa7.78□□□□□ -1.16
CYLD-216ENST00000569891 IPO8O15397 1037 aaKnown RBP7.78□□□□□ -1.16
CYLD-216ENST00000569891 NHSL1Q5SYE7 1610 aa7.78□□□□□ -1.16
CYLD-216ENST00000569891 USP31Q70CQ4 1352 aa7.77□□□□□ -1.16
CYLD-216ENST00000569891 FMN2Q9NZ56 1722 aa7.77□□□□□ -1.17
CYLD-216ENST00000569891 CADPS2Q86UW7 1296 aa7.77□□□□□ -1.17
CYLD-216ENST00000569891 C19orf44Q9H6X5 657 aa7.77□□□□□ -1.17
CYLD-216ENST00000569891 ZNF646O15015 1829 aaPredicted RBP7.77□□□□□ -1.17
CYLD-216ENST00000569891 PAK3O75914 559 aaPredicted RBP7.77□□□□□ -1.17
CYLD-216ENST00000569891 NLRP6P59044 892 aa7.77□□□□□ -1.17
CYLD-216ENST00000569891 GNAI1P63096 354 aa7.77□□□□□ -1.17
CYLD-216ENST00000569891 NME9Q86XW9 330 aa7.77□□□□□ -1.17
CYLD-216ENST00000569891 WWC1Q8IX03 1113 aa7.77□□□□□ -1.17
CYLD-216ENST00000569891 PTPRUQ92729 1446 aa7.77□□□□□ -1.17
CYLD-216ENST00000569891 FLT4P35916 1363 aa7.77□□□□□ -1.17
CYLD-216ENST00000569891 NEUROD2Q15784 382 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 POLKQ9UBT6 870 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 ADAMTS7Q9UKP4 1686 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 RTF1Q92541 710 aaKnown RBP7.76□□□□□ -1.17
CYLD-216ENST00000569891 PIK3C2AO00443 1686 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 DCCP43146 1447 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 KDM4FA0A1W2PPD8 638 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 ABTB2Q8N961 1025 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 RTL1A6NKG5 1358 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 RIPK4P57078 832 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 GAS2L2Q8NHY3 880 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 SBNO1A3KN83 1393 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 MSH6P52701 1360 aa7.76□□□□□ -1.17
CYLD-216ENST00000569891 NRAPQ86VF7 1730 aa7.75□□□□□ -1.17
CYLD-216ENST00000569891 TMPOP42166 694 aaKnown RBP7.75□□□□□ -1.17
CYLD-216ENST00000569891 NFE2L2Q16236 605 aa7.75□□□□□ -1.17
CYLD-216ENST00000569891 ESCO1Q5FWF5 840 aa7.75□□□□□ -1.17
CYLD-216ENST00000569891 PRR36Q9H6K5 1346 aa7.75□□□□□ -1.17
CYLD-216ENST00000569891 PDE3AQ14432 1141 aa7.75□□□□□ -1.17
CYLD-216ENST00000569891 ZNF521Q96K83 1311 aa7.75□□□□□ -1.17
CYLD-216ENST00000569891 NUTM2FA1L443 756 aa7.75□□□□□ -1.17
CYLD-216ENST00000569891 DUSP27Q5VZP5 1158 aa7.75□□□□□ -1.17
CYLD-216ENST00000569891 PMFBP1Q8TBY8 1022 aa7.75□□□□□ -1.17
CYLD-216ENST00000569891 PRKAR2BP31323 418 aa7.74□□□□□ -1.17
CYLD-216ENST00000569891 KIF16BQ96L93 1317 aa7.74□□□□□ -1.17
CYLD-216ENST00000569891 FAM208AQ9UK61 1670 aaKnown RBP7.74□□□□□ -1.17
CYLD-216ENST00000569891 COL24A1Q17RW2 1714 aa7.74□□□□□ -1.17
CYLD-216ENST00000569891 DLG5Q8TDM6 1919 aa7.74□□□□□ -1.17
CYLD-216ENST00000569891 ASPMQ8IZT6 3477 aa7.74□□□□□ -1.17
CYLD-216ENST00000569891 ARHGEF10O15013 1369 aa7.74□□□□□ -1.17
CYLD-216ENST00000569891 NCKAP5LQ9HCH0 1330 aa7.73□□□□□ -1.17
CYLD-216ENST00000569891 OVOS2A0A0J9YW53 1432 aa7.73□□□□□ -1.17
CYLD-216ENST00000569891 OVOS2Q6IE36 1432 aa7.73□□□□□ -1.17
CYLD-216ENST00000569891 HTATSF1O43719 755 aaKnown RBP7.73□□□□□ -1.17
CYLD-216ENST00000569891 FTSJ3Q8IY81 847 aaKnown RBP7.73□□□□□ -1.17
CYLD-216ENST00000569891 NPHP3Q7Z494 1330 aa7.73□□□□□ -1.17
CYLD-216ENST00000569891 TRMT2AQ8IZ69 625 aaKnown RBP7.73□□□□□ -1.17
CYLD-216ENST00000569891 CDCA7LQ96GN5 454 aa7.72□□□□□ -1.17
CYLD-216ENST00000569891 IFT57Q9NWB7 429 aa7.72□□□□□ -1.17
CYLD-216ENST00000569891 IL13P35225 146 aa7.72□□□□□ -1.17
CYLD-216ENST00000569891 IRX6P78412 446 aaPredicted RBP7.72□□□□□ -1.17
CYLD-216ENST00000569891 EMILIN1Q9Y6C2 1016 aa7.72□□□□□ -1.17
CYLD-216ENST00000569891 SOS1Q07889 1333 aaPredicted RBP7.72□□□□□ -1.17
CYLD-216ENST00000569891 ALDH1L2Q3SY69 923 aa7.72□□□□□ -1.17
CYLD-216ENST00000569891 COL3A1P02461 1466 aaPredicted RBP7.71□□□□□ -1.17
CYLD-216ENST00000569891 ZKSCAN2Q63HK3 967 aa7.71□□□□□ -1.17
CYLD-216ENST00000569891 RSPH6AQ9H0K4 717 aa7.71□□□□□ -1.17
CYLD-216ENST00000569891 IQSEC2Q5JU85 1478 aa7.71□□□□□ -1.17
CYLD-216ENST00000569891 EIF5BO60841 1220 aaKnown RBP7.71□□□□□ -1.18
CYLD-216ENST00000569891 RRP7AQ9Y3A4 280 aaKnown RBP7.71□□□□□ -1.18
CYLD-216ENST00000569891 RRS1Q15050 365 aaKnown RBP7.7□□□□□ -1.18
CYLD-216ENST00000569891 LMOD2Q6P5Q4 547 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 PHLPP1O60346 1717 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 CFAP54Q96N23 3096 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 BABAM1Q9NWV8 329 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 TOGARAM1Q9Y4F4 1720 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 CENPQQ7L2Z9 268 aaPredicted RBP7.7□□□□□ -1.18
CYLD-216ENST00000569891 SMC4Q9NTJ3 1288 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 SULT6B1Q6IMI4 303 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 SSH2Q76I76 1423 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 PLEKHF1Q96S99 279 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 TUBGCP6Q96RT7 1819 aa7.7□□□□□ -1.18
CYLD-216ENST00000569891 KRT28Q7Z3Y7 464 aa7.69□□□□□ -1.18
CYLD-216ENST00000569891 ZFHX4Q86UP3 3567 aa7.69□□□□□ -1.18
CYLD-216ENST00000569891 TCERG1O14776 1098 aaKnown RBP7.69□□□□□ -1.18
CYLD-216ENST00000569891 HMOX1P09601 288 aa7.69□□□□□ -1.18
CYLD-216ENST00000569891 AMOTQ4VCS5 1084 aa7.69□□□□□ -1.18
CYLD-216ENST00000569891 ZBTB47Q9UFB7 747 aaPredicted RBP7.69□□□□□ -1.18
CYLD-216ENST00000569891 EIF4A2Q14240 407 aaKnown RBP7.69□□□□□ -1.18
CYLD-216ENST00000569891 MAP2P11137 1827 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms