RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 FER1L4A9Z1Z3 1794 aa7.42□□□□□ -1.22
CDH13-213ENST00000569454 FYB1O15117 783 aa7.42□□□□□ -1.22
CDH13-213ENST00000569454 NEFMP07197 916 aa7.42□□□□□ -1.22
CDH13-213ENST00000569454 U2AF1L5P0DN76 240 aaPredicted RBP7.42□□□□□ -1.22
CDH13-213ENST00000569454 U2AF1Q01081 240 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDH13-213ENST00000569454 EID1Q9Y6B2 187 aa7.42□□□□□ -1.22
CDH13-213ENST00000569454 METP08581 1390 aa7.42□□□□□ -1.22
CDH13-213ENST00000569454 ADAMTS13Q76LX8 1427 aa7.42□□□□□ -1.22
CDH13-213ENST00000569454 TOPAZ1Q8N9V7 1692 aa7.41□□□□□ -1.22
CDH13-213ENST00000569454 DIAPH1O60610 1272 aaKnown RBP7.41□□□□□ -1.22
CDH13-213ENST00000569454 TNNT2P45379 298 aaPredicted RBP7.41□□□□□ -1.22
CDH13-213ENST00000569454 CALD1Q05682 793 aaKnown RBP7.41□□□□□ -1.22
CDH13-213ENST00000569454 CRBNQ96SW2 442 aa7.41□□□□□ -1.22
CDH13-213ENST00000569454 CCDC61Q9Y6R9 512 aa7.41□□□□□ -1.22
CDH13-213ENST00000569454 PIK3R4Q99570 1358 aa7.41□□□□□ -1.22
CDH13-213ENST00000569454 C3P01024 1663 aa7.41□□□□□ -1.22
CDH13-213ENST00000569454 AKAP12Q02952 1782 aa7.41□□□□□ -1.22
CDH13-213ENST00000569454 GALR2O43603 387 aaPredicted RBP7.4□□□□□ -1.22
CDH13-213ENST00000569454 ANP32AP39687 249 aaKnown RBP7.4□□□□□ -1.22
CDH13-213ENST00000569454 ZNF784Q8NCA9 323 aaPredicted RBP7.4□□□□□ -1.22
CDH13-213ENST00000569454 GGNBP2Q9H3C7 697 aa7.4□□□□□ -1.22
CDH13-213ENST00000569454 CABP1Q9NZU7 370 aa7.4□□□□□ -1.22
CDH13-213ENST00000569454 RIMS1Q86UR5 1692 aaKnown RBP7.4□□□□□ -1.23
CDH13-213ENST00000569454 NRKQ7Z2Y5 1582 aa7.39□□□□□ -1.23
CDH13-213ENST00000569454 LRRC7Q96NW7 1537 aa7.39□□□□□ -1.23
CDH13-213ENST00000569454 KDM2BQ8NHM5 1336 aa7.39□□□□□ -1.23
CDH13-213ENST00000569454 TOM1O60784 492 aa7.39□□□□□ -1.23
CDH13-213ENST00000569454 FCHSD2O94868 740 aa7.39□□□□□ -1.23
CDH13-213ENST00000569454 CANXP27824 592 aaKnown RBP7.39□□□□□ -1.23
CDH13-213ENST00000569454 THEMISQ8N1K5 641 aaPredicted RBP7.39□□□□□ -1.23
CDH13-213ENST00000569454 ZNF428Q96B54 188 aa7.39□□□□□ -1.23
CDH13-213ENST00000569454 ANKARQ7Z5J8 1434 aa7.38□□□□□ -1.23
CDH13-213ENST00000569454 U2SURPO15042 1029 aaKnown RBP7.38□□□□□ -1.23
CDH13-213ENST00000569454 PLIN1O60240 522 aa7.38□□□□□ -1.23
CDH13-213ENST00000569454 EIF5BO60841 1220 aaKnown RBP7.38□□□□□ -1.23
CDH13-213ENST00000569454 LMOD3Q0VAK6 560 aa7.38□□□□□ -1.23
CDH13-213ENST00000569454 WAPLQ7Z5K2 1190 aa7.38□□□□□ -1.23
CDH13-213ENST00000569454 NUDT16Q96DE0 195 aaKnown RBP7.38□□□□□ -1.23
CDH13-213ENST00000569454 COG3Q96JB2 828 aa7.38□□□□□ -1.23
CDH13-213ENST00000569454 PLEKHF1Q96S99 279 aa7.38□□□□□ -1.23
CDH13-213ENST00000569454 ANP32EQ9BTT0 268 aa7.38□□□□□ -1.23
CDH13-213ENST00000569454 TBX22Q9Y458 520 aa7.38□□□□□ -1.23
CDH13-213ENST00000569454 LRP5O75197 1615 aa7.38□□□□□ -1.23
CDH13-213ENST00000569454 ROBO2Q9HCK4 1378 aa7.37□□□□□ -1.23
CDH13-213ENST00000569454 TTC21AQ8NDW8 1320 aa7.37□□□□□ -1.23
CDH13-213ENST00000569454 KIF16BQ96L93 1317 aa7.37□□□□□ -1.23
CDH13-213ENST00000569454 TMPOP42166 694 aaKnown RBP7.37□□□□□ -1.23
CDH13-213ENST00000569454 RARSP54136 660 aaKnown RBP7.37□□□□□ -1.23
CDH13-213ENST00000569454 MAMSTRQ6ZN01 415 aa7.37□□□□□ -1.23
CDH13-213ENST00000569454 XRN1Q8IZH2 1706 aaKnown RBP7.37□□□□□ -1.23
CDH13-213ENST00000569454 CEP170BQ9Y4F5 1589 aaPredicted RBP7.37□□□□□ -1.23
CDH13-213ENST00000569454 OVOS2A0A0J9YW53 1432 aa7.36□□□□□ -1.23
CDH13-213ENST00000569454 USP6P35125 1406 aa7.36□□□□□ -1.23
CDH13-213ENST00000569454 OVOS2Q6IE36 1432 aa7.36□□□□□ -1.23
CDH13-213ENST00000569454 NALCNQ8IZF0 1738 aa7.36□□□□□ -1.23
CDH13-213ENST00000569454 ZNF142P52746 1687 aaPredicted RBP7.36□□□□□ -1.23
CDH13-213ENST00000569454 PLEKHG3A1L390 1219 aa7.36□□□□□ -1.23
CDH13-213ENST00000569454 HAP1P54257 671 aaPredicted RBP7.36□□□□□ -1.23
CDH13-213ENST00000569454 TXNDC2Q86VQ3 553 aa7.36□□□□□ -1.23
CDH13-213ENST00000569454 CLUAP1Q96AJ1 413 aa7.36□□□□□ -1.23
CDH13-213ENST00000569454 COL13A1Q5TAT6 717 aaPredicted RBP7.35□□□□□ -1.23
CDH13-213ENST00000569454 C20orf194Q5TEA3 1177 aa7.35□□□□□ -1.23
CDH13-213ENST00000569454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.35□□□□□ -1.23
CDH13-213ENST00000569454 PMFBP1Q8TBY8 1022 aa7.35□□□□□ -1.23
CDH13-213ENST00000569454 CHMP4BQ9H444 224 aaKnown RBP7.35□□□□□ -1.23
CDH13-213ENST00000569454 POLKQ9UBT6 870 aa7.35□□□□□ -1.23
CDH13-213ENST00000569454 TAOK2Q9UL54 1235 aa7.35□□□□□ -1.23
CDH13-213ENST00000569454 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.35□□□□□ -1.23
CDH13-213ENST00000569454 KIF24Q5T7B8 1368 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 USP31Q70CQ4 1352 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 TTC21BQ7Z4L5 1316 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 TULP1O00294 542 aaPredicted RBP7.34□□□□□ -1.23
CDH13-213ENST00000569454 IPO8O15397 1037 aaKnown RBP7.34□□□□□ -1.23
CDH13-213ENST00000569454 BCAR3O75815 825 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 NEUROD2Q15784 382 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 NFE2L2Q16236 605 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 ALDH1L2Q3SY69 923 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 ZKSCAN2Q63HK3 967 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 TNS4Q8IZW8 715 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 MPNDQ8N594 471 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 BACH2Q9BYV9 841 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 RSPH6AQ9H0K4 717 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 RRP7AQ9Y3A4 280 aaKnown RBP7.34□□□□□ -1.23
CDH13-213ENST00000569454 USP54Q70EL1 1684 aa7.34□□□□□ -1.23
CDH13-213ENST00000569454 ZNF335Q9H4Z2 1342 aaPredicted RBP7.33□□□□□ -1.24
CDH13-213ENST00000569454 PAK3O75914 559 aaPredicted RBP7.33□□□□□ -1.24
CDH13-213ENST00000569454 PDE4AP27815 886 aa7.33□□□□□ -1.24
CDH13-213ENST00000569454 LTKP29376 864 aa7.33□□□□□ -1.24
CDH13-213ENST00000569454 BRPF1P55201 1214 aaPredicted RBP7.33□□□□□ -1.24
CDH13-213ENST00000569454 RIPK4P57078 832 aa7.33□□□□□ -1.24
CDH13-213ENST00000569454 FTSJ3Q8IY81 847 aaKnown RBP7.33□□□□□ -1.24
CDH13-213ENST00000569454 DDRGK1Q96HY6 314 aa7.33□□□□□ -1.24
CDH13-213ENST00000569454 TRIM35Q9UPQ4 493 aa7.33□□□□□ -1.24
CDH13-213ENST00000569454 SSH2Q76I76 1423 aa7.33□□□□□ -1.24
CDH13-213ENST00000569454 PTPRUQ92729 1446 aa7.33□□□□□ -1.24
CDH13-213ENST00000569454 PRR36Q9H6K5 1346 aa7.32□□□□□ -1.24
CDH13-213ENST00000569454 MAP2P11137 1827 aaKnown RBP7.32□□□□□ -1.24
CDH13-213ENST00000569454 C7P10643 843 aa7.32□□□□□ -1.24
CDH13-213ENST00000569454 PRKAR2BP31323 418 aa7.32□□□□□ -1.24
CDH13-213ENST00000569454 IL13P35225 146 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms