RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 UPF3BQ9BZI7 483 aaKnown RBP25.1■■□□□ 1.61
SCRT1-201ENST00000569446 SMC5Q8IY18 1101 aa25.1■■□□□ 1.61
SCRT1-201ENST00000569446 RSPH6AQ9H0K4 717 aa25.1■■□□□ 1.61
SCRT1-201ENST00000569446 INTS3Q68E01 1043 aaKnown RBP25.09■■□□□ 1.61
SCRT1-201ENST00000569446 CHAMP1Q96JM3 812 aa25.09■■□□□ 1.61
SCRT1-201ENST00000569446 DDX54Q8TDD1 881 aaKnown RBP25.09■■□□□ 1.61
SCRT1-201ENST00000569446 NAP1L2Q9ULW6 460 aaPredicted RBP25.09■■□□□ 1.61
SCRT1-201ENST00000569446 HAP1P54257 671 aaPredicted RBP25.08■■□□□ 1.61
SCRT1-201ENST00000569446 MRPL50Q8N5N7 158 aaKnown RBP25.08■■□□□ 1.61
SCRT1-201ENST00000569446 XPCQ01831 940 aaPredicted RBP25.07■■□□□ 1.6
SCRT1-201ENST00000569446 PLEKHF1Q96S99 279 aa25.07■■□□□ 1.6
SCRT1-201ENST00000569446 ZBTB7BO15156 539 aaPredicted RBP25.07■■□□□ 1.6
SCRT1-201ENST00000569446 GAS2L2Q8NHY3 880 aa25.07■■□□□ 1.6
SCRT1-201ENST00000569446 CLTCL1P53675 1640 aa25.07■■□□□ 1.6
SCRT1-201ENST00000569446 MCCP23508 829 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 MRE11P49959 708 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 EID1Q9Y6B2 187 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 ABCC1P33527 1531 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 CD2BP2O95400 341 aaKnown RBP25.06■■□□□ 1.6
SCRT1-201ENST00000569446 ALDH1L2Q3SY69 923 aa25.06■■□□□ 1.6
SCRT1-201ENST00000569446 ANXA1P04083 346 aa25.05■■□□□ 1.6
SCRT1-201ENST00000569446 CFAP44Q96MT7 982 aa25.05■■□□□ 1.6
SCRT1-201ENST00000569446 ZNF518AQ6AHZ1 1483 aa25.05■■□□□ 1.6
SCRT1-201ENST00000569446 RRAGDQ9NQL2 400 aaPredicted RBP25.04■■□□□ 1.6
SCRT1-201ENST00000569446 IFT57Q9NWB7 429 aa25.04■■□□□ 1.6
SCRT1-201ENST00000569446 POLR1AO95602 1720 aaPredicted RBP25.04■■□□□ 1.6
SCRT1-201ENST00000569446 AIMP1Q12904 312 aaKnown RBP25.03■■□□□ 1.6
SCRT1-201ENST00000569446 KIAA1211Q6ZU35 1233 aa25.03■■□□□ 1.6
SCRT1-201ENST00000569446 SURF6O75683 361 aaKnown RBP25.03■■□□□ 1.6
SCRT1-201ENST00000569446 NASPP49321 788 aaPredicted RBP25.03■■□□□ 1.6
SCRT1-201ENST00000569446 FAM43AQ8N2R8 423 aa25.03■■□□□ 1.6
SCRT1-201ENST00000569446 REC8O95072 547 aa25.03■■□□□ 1.6
SCRT1-201ENST00000569446 BMP2KLQ5H9B9 411 aa25.03■■□□□ 1.6
SCRT1-201ENST00000569446 NUTM1Q86Y26 1132 aa25.02■■□□□ 1.6
SCRT1-201ENST00000569446 ABTB2Q8N961 1025 aa25.02■■□□□ 1.6
SCRT1-201ENST00000569446 TRPM2O94759 1503 aa25.02■■□□□ 1.6
SCRT1-201ENST00000569446 GDPD2Q9HCC8 539 aa25.01■■□□□ 1.59
SCRT1-201ENST00000569446 ZNF330Q9Y3S2 320 aaPredicted RBP25.01■■□□□ 1.59
SCRT1-201ENST00000569446 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
SCRT1-201ENST00000569446 G2E3Q7L622 706 aa25■■□□□ 1.59
SCRT1-201ENST00000569446 EIF4A2Q14240 407 aaKnown RBP24.99■■□□□ 1.59
SCRT1-201ENST00000569446 SDSP20132 328 aa24.99■■□□□ 1.59
SCRT1-201ENST00000569446 RBM27Q9P2N5 1060 aaKnown RBP24.99■■□□□ 1.59
SCRT1-201ENST00000569446 ZGPATQ8N5A5 531 aaKnown RBP24.98■■□□□ 1.59
SCRT1-201ENST00000569446 KDM5AP29375 1690 aaKnown RBP24.98■■□□□ 1.59
SCRT1-201ENST00000569446 SYNMO15061 1565 aa24.97■■□□□ 1.59
SCRT1-201ENST00000569446 ABCC11Q96J66 1382 aa24.97■■□□□ 1.59
SCRT1-201ENST00000569446 ACEP12821 1306 aa24.97■■□□□ 1.59
SCRT1-201ENST00000569446 ZCCHC11Q5TAX3 1644 aaKnown RBP24.97■■□□□ 1.59
SCRT1-201ENST00000569446 ANTXR1Q9H6X2 564 aa24.97■■□□□ 1.59
SCRT1-201ENST00000569446 FGD1P98174 961 aa24.96■■□□□ 1.59
SCRT1-201ENST00000569446 BCL11BQ9C0K0 894 aaPredicted RBP24.96■■□□□ 1.59
SCRT1-201ENST00000569446 ZFYVE16Q7Z3T8 1539 aa24.96■■□□□ 1.59
SCRT1-201ENST00000569446 TEFQ10587 303 aa24.96■■□□□ 1.59
SCRT1-201ENST00000569446 UBTFL1P0CB47 393 aaPredicted RBP24.95■■□□□ 1.59
SCRT1-201ENST00000569446 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.59
SCRT1-201ENST00000569446 NSD2O96028 1365 aa24.95■■□□□ 1.58
SCRT1-201ENST00000569446 E9PCH4 1651 aa24.95■■□□□ 1.58
SCRT1-201ENST00000569446 UNC13BO14795 1591 aa24.95■■□□□ 1.58
SCRT1-201ENST00000569446 YTHDC2Q9H6S0 1430 aaKnown RBP24.95■■□□□ 1.58
SCRT1-201ENST00000569446 HDGFL1Q5TGJ6 251 aa24.95■■□□□ 1.58
SCRT1-201ENST00000569446 MADDQ8WXG6 1647 aa24.94■■□□□ 1.58
SCRT1-201ENST00000569446 GNAI2P04899 355 aa24.94■■□□□ 1.58
SCRT1-201ENST00000569446 RABEP1Q15276 862 aa24.94■■□□□ 1.58
SCRT1-201ENST00000569446 IL13P35225 146 aa24.94■■□□□ 1.58
SCRT1-201ENST00000569446 SKOR2Q2VWA4 1001 aaPredicted RBP24.94■■□□□ 1.58
SCRT1-201ENST00000569446 PLEKHM2Q8IWE5 1019 aa24.93■■□□□ 1.58
SCRT1-201ENST00000569446 SIRT2Q8IXJ6 389 aa24.93■■□□□ 1.58
SCRT1-201ENST00000569446 PKP1Q13835 747 aa24.93■■□□□ 1.58
SCRT1-201ENST00000569446 IL16Q14005 1332 aa24.92■■□□□ 1.58
SCRT1-201ENST00000569446 ESPNB1AK53 854 aa24.92■■□□□ 1.58
SCRT1-201ENST00000569446 C9orf78Q9NZ63 289 aaPredicted RBP24.92■■□□□ 1.58
SCRT1-201ENST00000569446 PPIP5K1Q6PFW1 1433 aa24.92■■□□□ 1.58
SCRT1-201ENST00000569446 ERC2O15083 957 aa24.91■■□□□ 1.58
SCRT1-201ENST00000569446 LRRFIP2Q9Y608 721 aaKnown RBP24.91■■□□□ 1.58
SCRT1-201ENST00000569446 NUCB2P80303 420 aa24.9■■□□□ 1.58
SCRT1-201ENST00000569446 FOSBP53539 338 aa24.9■■□□□ 1.58
SCRT1-201ENST00000569446 TTC22Q5TAA0 569 aa24.9■■□□□ 1.58
SCRT1-201ENST00000569446 ZNF692Q9BU19 519 aaPredicted RBP24.9■■□□□ 1.58
SCRT1-201ENST00000569446 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
SCRT1-201ENST00000569446 BAG4O95429 457 aaKnown RBP24.89■■□□□ 1.58
SCRT1-201ENST00000569446 GSPT1P15170 499 aaKnown RBP24.89■■□□□ 1.58
SCRT1-201ENST00000569446 SYCE3A1L190 88 aa24.89■■□□□ 1.57
SCRT1-201ENST00000569446 LRRCC1Q9C099 1032 aa24.89■■□□□ 1.57
SCRT1-201ENST00000569446 MTHFSDQ2M296 383 aaKnown RBP24.89■■□□□ 1.57
SCRT1-201ENST00000569446 SIL1Q9H173 461 aa24.89■■□□□ 1.57
SCRT1-201ENST00000569446 HSP90AA2PQ14568 343 aaPredicted RBP24.88■■□□□ 1.57
SCRT1-201ENST00000569446 CSB-PGBD3P0DP91 1061 aa24.88■■□□□ 1.57
SCRT1-201ENST00000569446 RBM10P98175 930 aaKnown RBP24.88■■□□□ 1.57
SCRT1-201ENST00000569446 GLIPR1L2Q4G1C9 344 aa24.88■■□□□ 1.57
SCRT1-201ENST00000569446 VPS37CA5D8V6 355 aaPredicted RBP24.87■■□□□ 1.57
SCRT1-201ENST00000569446 SRGAP3O43295 1099 aa24.87■■□□□ 1.57
SCRT1-201ENST00000569446 PSME1Q06323 249 aa24.87■■□□□ 1.57
SCRT1-201ENST00000569446 RPAP2Q8IXW5 612 aaPredicted RBP24.87■■□□□ 1.57
SCRT1-201ENST00000569446 CWC27Q6UX04 472 aaKnown RBP24.87■■□□□ 1.57
SCRT1-201ENST00000569446 GAS2L3Q86XJ1 694 aa24.86■■□□□ 1.57
SCRT1-201ENST00000569446 SBNO2Q9Y2G9 1366 aa24.86■■□□□ 1.57
SCRT1-201ENST00000569446 PLXNC1O60486 1568 aa24.86■■□□□ 1.57
SCRT1-201ENST00000569446 CEP85Q6P2H3 762 aa24.86■■□□□ 1.57
SCRT1-201ENST00000569446 AMOTL2Q9Y2J4 779 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms