RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 C3P01024 1663 aa23.88■■□□□ 1.41
MSLN-207ENST00000566549 SLC4A3P48751 1232 aa23.88■■□□□ 1.41
MSLN-207ENST00000566549 ITSN1Q15811 1721 aa23.87■■□□□ 1.41
MSLN-207ENST00000566549 AEBP1Q8IUX7 1158 aa23.87■■□□□ 1.41
MSLN-207ENST00000566549 DCTN1Q14203 1278 aa23.86■■□□□ 1.41
MSLN-207ENST00000566549 DDRGK1Q96HY6 314 aa23.86■■□□□ 1.41
MSLN-207ENST00000566549 TSPYL6Q8N831 410 aa23.86■■□□□ 1.41
MSLN-207ENST00000566549 PLEKHG3A1L390 1219 aa23.85■■□□□ 1.41
MSLN-207ENST00000566549 AKAP12Q02952 1782 aa23.85■■□□□ 1.41
MSLN-207ENST00000566549 KIF16BQ96L93 1317 aa23.85■■□□□ 1.41
MSLN-207ENST00000566549 EIF4A2Q14240 407 aaKnown RBP23.85■■□□□ 1.41
MSLN-207ENST00000566549 MBIPQ9NS73 344 aa23.84■■□□□ 1.41
MSLN-207ENST00000566549 DDX19BQ9UMR2 479 aa23.84■■□□□ 1.41
MSLN-207ENST00000566549 SULT6B1Q6IMI4 303 aa23.84■■□□□ 1.41
MSLN-207ENST00000566549 USP6P35125 1406 aa23.84■■□□□ 1.41
MSLN-207ENST00000566549 IPO8O15397 1037 aaKnown RBP23.82■■□□□ 1.4
MSLN-207ENST00000566549 GNAI1P63096 354 aa23.82■■□□□ 1.4
MSLN-207ENST00000566549 CALD1Q05682 793 aaKnown RBP23.82■■□□□ 1.4
MSLN-207ENST00000566549 ALDH1L2Q3SY69 923 aa23.82■■□□□ 1.4
MSLN-207ENST00000566549 HSP90AB2PQ58FF8 381 aa23.82■■□□□ 1.4
MSLN-207ENST00000566549 THEMISQ8N1K5 641 aaPredicted RBP23.82■■□□□ 1.4
MSLN-207ENST00000566549 IFT57Q9NWB7 429 aa23.82■■□□□ 1.4
MSLN-207ENST00000566549 TBX22Q9Y458 520 aa23.82■■□□□ 1.4
MSLN-207ENST00000566549 SEC24BO95487 1268 aa23.81■■□□□ 1.4
MSLN-207ENST00000566549 VAMP4O75379 141 aa23.81■■□□□ 1.4
MSLN-207ENST00000566549 OVOS2A0A0J9YW53 1432 aa23.8■■□□□ 1.4
MSLN-207ENST00000566549 OVOS2Q6IE36 1432 aa23.8■■□□□ 1.4
MSLN-207ENST00000566549 NGDNQ8NEJ9 315 aaKnown RBP23.8■■□□□ 1.4
MSLN-207ENST00000566549 SLIT1O75093 1534 aa23.79■■□□□ 1.4
MSLN-207ENST00000566549 ARHGAP23Q9P227 1491 aa23.79■■□□□ 1.4
MSLN-207ENST00000566549 ZNF853P0CG23 659 aa23.78■■□□□ 1.4
MSLN-207ENST00000566549 LMOD3Q0VAK6 560 aa23.78■■□□□ 1.4
MSLN-207ENST00000566549 TOPAZ1Q8N9V7 1692 aa23.78■■□□□ 1.4
MSLN-207ENST00000566549 NRKQ7Z2Y5 1582 aa23.77■■□□□ 1.4
MSLN-207ENST00000566549 FER1L4A9Z1Z3 1794 aa23.77■■□□□ 1.4
MSLN-207ENST00000566549 DAXXQ9UER7 740 aaPredicted RBP23.77■■□□□ 1.4
MSLN-207ENST00000566549 TWISTNBQ3B726 338 aaPredicted RBP23.76■■□□□ 1.39
MSLN-207ENST00000566549 C8orf58Q8NAV2 365 aa23.76■■□□□ 1.39
MSLN-207ENST00000566549 CFAP44Q96MT7 982 aa23.76■■□□□ 1.39
MSLN-207ENST00000566549 MRPL50Q8N5N7 158 aaKnown RBP23.76■■□□□ 1.39
MSLN-207ENST00000566549 ZBTB40Q9NUA8 1239 aa23.76■■□□□ 1.39
MSLN-207ENST00000566549 KCNA6P17658 529 aa23.75■■□□□ 1.39
MSLN-207ENST00000566549 RTL5Q5HYW3 569 aaPredicted RBP23.75■■□□□ 1.39
MSLN-207ENST00000566549 MCM10Q7L590 875 aa23.74■■□□□ 1.39
MSLN-207ENST00000566549 PTCH1Q13635 1447 aa23.74■■□□□ 1.39
MSLN-207ENST00000566549 HDAC1Q13547 482 aaPredicted RBP23.73■■□□□ 1.39
MSLN-207ENST00000566549 USP19O94966 1318 aa23.73■■□□□ 1.39
MSLN-207ENST00000566549 MAP3K19Q56UN5 1328 aa23.73■■□□□ 1.39
MSLN-207ENST00000566549 ZNF428Q96B54 188 aa23.73■■□□□ 1.39
MSLN-207ENST00000566549 NUTM2GQ5VZR2 741 aa23.72■■□□□ 1.39
MSLN-207ENST00000566549 SSH2Q76I76 1423 aa23.72■■□□□ 1.39
MSLN-207ENST00000566549 C1orf115Q9H7X2 142 aa23.71■■□□□ 1.39
MSLN-207ENST00000566549 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
MSLN-207ENST00000566549 KRT24Q2M2I5 525 aa23.71■■□□□ 1.39
MSLN-207ENST00000566549 USP31Q70CQ4 1352 aa23.7■■□□□ 1.39
MSLN-207ENST00000566549 RBM33Q96EV2 1170 aaKnown RBP23.7■■□□□ 1.38
MSLN-207ENST00000566549 PEAK1Q9H792 1746 aa23.7■■□□□ 1.38
MSLN-207ENST00000566549 BRPF1P55201 1214 aaPredicted RBP23.69■■□□□ 1.38
MSLN-207ENST00000566549 TTC21AQ8NDW8 1320 aa23.69■■□□□ 1.38
MSLN-207ENST00000566549 DLG5Q8TDM6 1919 aa23.68■■□□□ 1.38
MSLN-207ENST00000566549 AMPHP49418 695 aa23.67■■□□□ 1.38
MSLN-207ENST00000566549 NLRP6P59044 892 aa23.67■■□□□ 1.38
MSLN-207ENST00000566549 FOXO3O43524 673 aa23.67■■□□□ 1.38
MSLN-207ENST00000566549 DEKP35659 375 aaKnown RBP23.67■■□□□ 1.38
MSLN-207ENST00000566549 SMC5Q8IY18 1101 aa23.66■■□□□ 1.38
MSLN-207ENST00000566549 ZBTB7BO15156 539 aaPredicted RBP23.65■■□□□ 1.38
MSLN-207ENST00000566549 ARHGAP45Q92619 1136 aa23.65■■□□□ 1.38
MSLN-207ENST00000566549 MIS18AQ9NYP9 233 aa23.64■■□□□ 1.37
MSLN-207ENST00000566549 RGPD8O14715 1765 aaPredicted RBP23.63■■□□□ 1.37
MSLN-207ENST00000566549 C14orf37Q86TY3 774 aa23.63■■□□□ 1.37
MSLN-207ENST00000566549 LNPKQ9C0E8 428 aa23.63■■□□□ 1.37
MSLN-207ENST00000566549 NALCNQ8IZF0 1738 aa23.63■■□□□ 1.37
MSLN-207ENST00000566549 FLT4P35916 1363 aa23.63■■□□□ 1.37
MSLN-207ENST00000566549 VIRMAQ69YN4 1812 aaKnown RBP23.62■■□□□ 1.37
MSLN-207ENST00000566549 SBNO1A3KN83 1393 aa23.62■■□□□ 1.37
MSLN-207ENST00000566549 MTHFSDQ2M296 383 aaKnown RBP23.62■■□□□ 1.37
MSLN-207ENST00000566549 UPF2Q9HAU5 1272 aaKnown RBP23.62■■□□□ 1.37
MSLN-207ENST00000566549 ABCC4O15439 1325 aa23.62■■□□□ 1.37
MSLN-207ENST00000566549 EYA1Q99502 592 aa23.61■■□□□ 1.37
MSLN-207ENST00000566549 CHL1O00533 1208 aa23.6■■□□□ 1.37
MSLN-207ENST00000566549 CEP170BQ9Y4F5 1589 aaPredicted RBP23.6■■□□□ 1.37
MSLN-207ENST00000566549 XRN1Q8IZH2 1706 aaKnown RBP23.6■■□□□ 1.37
MSLN-207ENST00000566549 PIK3R4Q99570 1358 aa23.6■■□□□ 1.37
MSLN-207ENST00000566549 ARHGEF10O15013 1369 aa23.59■■□□□ 1.37
MSLN-207ENST00000566549 ABTB2Q8N961 1025 aa23.59■■□□□ 1.37
MSLN-207ENST00000566549 NUCB1Q02818 461 aa23.59■■□□□ 1.37
MSLN-207ENST00000566549 API5Q9BZZ5 524 aaKnown RBP23.59■■□□□ 1.37
MSLN-207ENST00000566549 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.37
MSLN-207ENST00000566549 RTF1Q92541 710 aaKnown RBP23.58■■□□□ 1.36
MSLN-207ENST00000566549 PIK3C2AO00443 1686 aa23.57■■□□□ 1.36
MSLN-207ENST00000566549 CHD1LQ86WJ1 897 aa23.57■■□□□ 1.36
MSLN-207ENST00000566549 BCL11AQ9H165 835 aa23.57■■□□□ 1.36
MSLN-207ENST00000566549 MFAP1P55081 439 aaKnown RBP23.56■■□□□ 1.36
MSLN-207ENST00000566549 ANKRD45Q5TZF3 282 aa23.56■■□□□ 1.36
MSLN-207ENST00000566549 ANKLE2Q86XL3 938 aa23.56■■□□□ 1.36
MSLN-207ENST00000566549 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
MSLN-207ENST00000566549 RIMS1Q86UR5 1692 aaKnown RBP23.56■■□□□ 1.36
MSLN-207ENST00000566549 SIRT2Q8IXJ6 389 aa23.55■■□□□ 1.36
MSLN-207ENST00000566549 TBC1D32Q96NH3 1257 aa23.55■■□□□ 1.36
MSLN-207ENST00000566549 ANKARQ7Z5J8 1434 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms