RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 NEFMP07197 916 aa15.71■□□□□ 0.1
SCAMP2-207ENST00000566480 FTSJ3Q8IY81 847 aaKnown RBP15.7■□□□□ 0.1
SCAMP2-207ENST00000566480 ARXQ96QS3 562 aa15.7■□□□□ 0.1
SCAMP2-207ENST00000566480 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
SCAMP2-207ENST00000566480 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
SCAMP2-207ENST00000566480 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
SCAMP2-207ENST00000566480 ZNF692Q9BU19 519 aaPredicted RBP15.69■□□□□ 0.1
SCAMP2-207ENST00000566480 TTC21BQ7Z4L5 1316 aa15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 MON2Q7Z3U7 1717 aa15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 ELL2O00472 640 aaPredicted RBP15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 TRIM27P14373 513 aa15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 FAM83GA6ND36 823 aa15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 ITSN1Q15811 1721 aa15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 C8orf34Q49A92 452 aa15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 DZIP1LQ8IYY4 767 aaKnown RBP15.68■□□□□ 0.1
SCAMP2-207ENST00000566480 DCTN1Q14203 1278 aa15.67■□□□□ 0.1
SCAMP2-207ENST00000566480 NBR1Q14596 966 aa15.67■□□□□ 0.1
SCAMP2-207ENST00000566480 NFE2L2Q16236 605 aa15.67■□□□□ 0.1
SCAMP2-207ENST00000566480 AEBP1Q8IUX7 1158 aa15.67■□□□□ 0.1
SCAMP2-207ENST00000566480 LTBP4Q8N2S1 1624 aa15.67■□□□□ 0.1
SCAMP2-207ENST00000566480 AKAP12Q02952 1782 aa15.66■□□□□ 0.1
SCAMP2-207ENST00000566480 ZBTB22O15209 634 aa15.66■□□□□ 0.1
SCAMP2-207ENST00000566480 MVPQ14764 893 aaKnown RBP15.66■□□□□ 0.1
SCAMP2-207ENST00000566480 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
SCAMP2-207ENST00000566480 ITPRIPQ8IWB1 547 aa15.66■□□□□ 0.1
SCAMP2-207ENST00000566480 IL16Q14005 1332 aa15.65■□□□□ 0.1
SCAMP2-207ENST00000566480 AATKQ6ZMQ8 1374 aa15.65■□□□□ 0.1
SCAMP2-207ENST00000566480 CDK12Q9NYV4 1490 aaPredicted RBP15.65■□□□□ 0.1
SCAMP2-207ENST00000566480 HSP90AB2PQ58FF8 381 aa15.65■□□□□ 0.1
SCAMP2-207ENST00000566480 TSPYL6Q8N831 410 aa15.65■□□□□ 0.1
SCAMP2-207ENST00000566480 CHD2O14647 1828 aaKnown RBP15.64■□□□□ 0.09
SCAMP2-207ENST00000566480 EIF4A2Q14240 407 aaKnown RBP15.63■□□□□ 0.09
SCAMP2-207ENST00000566480 SULT6B1Q6IMI4 303 aa15.63■□□□□ 0.09
SCAMP2-207ENST00000566480 ATF7IPQ6VMQ6 1270 aa15.63■□□□□ 0.09
SCAMP2-207ENST00000566480 PLEKHG3A1L390 1219 aa15.63■□□□□ 0.09
SCAMP2-207ENST00000566480 CT47B1P0C2W7 299 aaPredicted RBP15.63■□□□□ 0.09
SCAMP2-207ENST00000566480 USP6P35125 1406 aa15.63■□□□□ 0.09
SCAMP2-207ENST00000566480 KCNA6P17658 529 aa15.62■□□□□ 0.09
SCAMP2-207ENST00000566480 TMEM57Q8N5G2 664 aa15.62■□□□□ 0.09
SCAMP2-207ENST00000566480 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
SCAMP2-207ENST00000566480 TBX22Q9Y458 520 aa15.62■□□□□ 0.09
SCAMP2-207ENST00000566480 NUTM2GQ5VZR2 741 aa15.62■□□□□ 0.09
SCAMP2-207ENST00000566480 SLC4A3P48751 1232 aa15.61■□□□□ 0.09
SCAMP2-207ENST00000566480 MBIPQ9NS73 344 aa15.61■□□□□ 0.09
SCAMP2-207ENST00000566480 RGPD8O14715 1765 aaPredicted RBP15.61■□□□□ 0.09
SCAMP2-207ENST00000566480 PDZRN3Q9UPQ7 1066 aa15.6■□□□□ 0.09
SCAMP2-207ENST00000566480 DLG5Q8TDM6 1919 aa15.59■□□□□ 0.09
SCAMP2-207ENST00000566480 OVOS2A0A0J9YW53 1432 aa15.59■□□□□ 0.09
SCAMP2-207ENST00000566480 OVOS2Q6IE36 1432 aa15.59■□□□□ 0.09
SCAMP2-207ENST00000566480 TOPAZ1Q8N9V7 1692 aa15.59■□□□□ 0.09
SCAMP2-207ENST00000566480 NRKQ7Z2Y5 1582 aa15.58■□□□□ 0.09
SCAMP2-207ENST00000566480 TULP1O00294 542 aaPredicted RBP15.58■□□□□ 0.09
SCAMP2-207ENST00000566480 VAMP4O75379 141 aa15.58■□□□□ 0.09
SCAMP2-207ENST00000566480 RWDD1Q9H446 243 aaPredicted RBP15.58■□□□□ 0.09
SCAMP2-207ENST00000566480 SEC24BO95487 1268 aa15.58■□□□□ 0.08
SCAMP2-207ENST00000566480 C8orf58Q8NAV2 365 aa15.58■□□□□ 0.08
SCAMP2-207ENST00000566480 MCM10Q7L590 875 aa15.57■□□□□ 0.08
SCAMP2-207ENST00000566480 GNAI1P63096 354 aa15.57■□□□□ 0.08
SCAMP2-207ENST00000566480 KRT24Q2M2I5 525 aa15.57■□□□□ 0.08
SCAMP2-207ENST00000566480 IFT57Q9NWB7 429 aa15.57■□□□□ 0.08
SCAMP2-207ENST00000566480 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
SCAMP2-207ENST00000566480 XRN1Q8IZH2 1706 aaKnown RBP15.57■□□□□ 0.08
SCAMP2-207ENST00000566480 MAP3K19Q56UN5 1328 aa15.57■□□□□ 0.08
SCAMP2-207ENST00000566480 KIF16BQ96L93 1317 aa15.56■□□□□ 0.08
SCAMP2-207ENST00000566480 PEAK1Q9H792 1746 aa15.56■□□□□ 0.08
SCAMP2-207ENST00000566480 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
SCAMP2-207ENST00000566480 ZNF853P0CG23 659 aa15.55■□□□□ 0.08
SCAMP2-207ENST00000566480 TWISTNBQ3B726 338 aaPredicted RBP15.55■□□□□ 0.08
SCAMP2-207ENST00000566480 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
SCAMP2-207ENST00000566480 AAMPQ13685 434 aa15.55■□□□□ 0.08
SCAMP2-207ENST00000566480 ALDH1L2Q3SY69 923 aa15.55■□□□□ 0.08
SCAMP2-207ENST00000566480 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
SCAMP2-207ENST00000566480 NWD1Q149M9 1564 aa15.55■□□□□ 0.08
SCAMP2-207ENST00000566480 PTCH1Q13635 1447 aa15.54■□□□□ 0.08
SCAMP2-207ENST00000566480 SSH2Q76I76 1423 aa15.54■□□□□ 0.08
SCAMP2-207ENST00000566480 FOXO3O43524 673 aa15.54■□□□□ 0.08
SCAMP2-207ENST00000566480 NLRP6P59044 892 aa15.54■□□□□ 0.08
SCAMP2-207ENST00000566480 CALD1Q05682 793 aaKnown RBP15.54■□□□□ 0.08
SCAMP2-207ENST00000566480 TPRNQ4KMQ1 711 aa15.54■□□□□ 0.08
SCAMP2-207ENST00000566480 C1orf115Q9H7X2 142 aa15.54■□□□□ 0.08
SCAMP2-207ENST00000566480 C14orf37Q86TY3 774 aa15.54■□□□□ 0.08
SCAMP2-207ENST00000566480 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
SCAMP2-207ENST00000566480 ZBTB40Q9NUA8 1239 aa15.53■□□□□ 0.08
SCAMP2-207ENST00000566480 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
SCAMP2-207ENST00000566480 NALCNQ8IZF0 1738 aa15.53■□□□□ 0.08
SCAMP2-207ENST00000566480 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
SCAMP2-207ENST00000566480 AMPHP49418 695 aa15.53■□□□□ 0.08
SCAMP2-207ENST00000566480 LMOD3Q0VAK6 560 aa15.53■□□□□ 0.08
SCAMP2-207ENST00000566480 USP31Q70CQ4 1352 aa15.52■□□□□ 0.08
SCAMP2-207ENST00000566480 TTC21AQ8NDW8 1320 aa15.5■□□□□ 0.07
SCAMP2-207ENST00000566480 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
SCAMP2-207ENST00000566480 LTV1Q96GA3 475 aaPredicted RBP15.5■□□□□ 0.07
SCAMP2-207ENST00000566480 TMEM94Q12767 1356 aa15.5■□□□□ 0.07
SCAMP2-207ENST00000566480 ABTB2Q8N961 1025 aa15.5■□□□□ 0.07
SCAMP2-207ENST00000566480 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
SCAMP2-207ENST00000566480 USP19O94966 1318 aa15.49■□□□□ 0.07
SCAMP2-207ENST00000566480 MTHFSDQ2M296 383 aaKnown RBP15.49■□□□□ 0.07
SCAMP2-207ENST00000566480 EYA1Q99502 592 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms