RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 KRT28Q7Z3Y7 464 aa13.03□□□□□ -0.32
TUBGCP4-211ENST00000566251 KCNH5Q8NCM2 988 aa13.03□□□□□ -0.32
TUBGCP4-211ENST00000566251 OVOS2A0A0J9YW53 1432 aa13.03□□□□□ -0.32
TUBGCP4-211ENST00000566251 OVOS2Q6IE36 1432 aa13.03□□□□□ -0.32
TUBGCP4-211ENST00000566251 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.32
TUBGCP4-211ENST00000566251 FCHSD2O94868 740 aa13.02□□□□□ -0.33
TUBGCP4-211ENST00000566251 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.33
TUBGCP4-211ENST00000566251 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
TUBGCP4-211ENST00000566251 MAPK8IP3Q9UPT6 1336 aa13.02□□□□□ -0.33
TUBGCP4-211ENST00000566251 NRKQ7Z2Y5 1582 aa13.02□□□□□ -0.33
TUBGCP4-211ENST00000566251 APAF1O14727 1248 aa13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 AMPHP49418 695 aa13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 PIP4K2BP78356 416 aa13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 CCDC146Q8IYE0 955 aa13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 EMILIN1Q9Y6C2 1016 aa13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 KIF1AQ12756 1690 aa13.01□□□□□ -0.33
TUBGCP4-211ENST00000566251 LRRC7Q96NW7 1537 aa13□□□□□ -0.33
TUBGCP4-211ENST00000566251 MST1RQ04912 1400 aa13□□□□□ -0.33
TUBGCP4-211ENST00000566251 RRS1Q15050 365 aaKnown RBP13□□□□□ -0.33
TUBGCP4-211ENST00000566251 RNF39Q9H2S5 420 aa13□□□□□ -0.33
TUBGCP4-211ENST00000566251 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
TUBGCP4-211ENST00000566251 NBR1Q14596 966 aa12.99□□□□□ -0.33
TUBGCP4-211ENST00000566251 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
TUBGCP4-211ENST00000566251 SLAIN2Q9P270 581 aa12.99□□□□□ -0.33
TUBGCP4-211ENST00000566251 SBNO1A3KN83 1393 aa12.98□□□□□ -0.33
TUBGCP4-211ENST00000566251 SOX12O15370 315 aa12.98□□□□□ -0.33
TUBGCP4-211ENST00000566251 TOM1O60784 492 aa12.98□□□□□ -0.33
TUBGCP4-211ENST00000566251 FBLN1P23142 703 aa12.98□□□□□ -0.33
TUBGCP4-211ENST00000566251 IL13P35225 146 aa12.98□□□□□ -0.33
TUBGCP4-211ENST00000566251 TCP11L2Q8N4U5 519 aa12.98□□□□□ -0.33
TUBGCP4-211ENST00000566251 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
TUBGCP4-211ENST00000566251 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
TUBGCP4-211ENST00000566251 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
TUBGCP4-211ENST00000566251 FLT4P35916 1363 aa12.97□□□□□ -0.33
TUBGCP4-211ENST00000566251 CCDC27Q2M243 656 aa12.97□□□□□ -0.33
TUBGCP4-211ENST00000566251 NUTM2GQ5VZR2 741 aa12.97□□□□□ -0.33
TUBGCP4-211ENST00000566251 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
TUBGCP4-211ENST00000566251 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
TUBGCP4-211ENST00000566251 WDR63Q8IWG1 891 aa12.96□□□□□ -0.33
TUBGCP4-211ENST00000566251 SHPRHQ149N8 1683 aa12.96□□□□□ -0.34
TUBGCP4-211ENST00000566251 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
TUBGCP4-211ENST00000566251 E9PSI1 815 aa12.95□□□□□ -0.34
TUBGCP4-211ENST00000566251 ABCB7O75027 752 aa12.95□□□□□ -0.34
TUBGCP4-211ENST00000566251 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
TUBGCP4-211ENST00000566251 PIK3C2AO00443 1686 aa12.94□□□□□ -0.34
TUBGCP4-211ENST00000566251 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
TUBGCP4-211ENST00000566251 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
TUBGCP4-211ENST00000566251 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
TUBGCP4-211ENST00000566251 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
TUBGCP4-211ENST00000566251 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
TUBGCP4-211ENST00000566251 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
TUBGCP4-211ENST00000566251 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
TUBGCP4-211ENST00000566251 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 GCP02774 474 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 LMOD3Q0VAK6 560 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 BRINP3Q76B58 766 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 WWC1Q8IX03 1113 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 HS6ST3Q8IZP7 471 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 IP6K1Q92551 441 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
TUBGCP4-211ENST00000566251 ZNF521Q96K83 1311 aa12.92□□□□□ -0.34
TUBGCP4-211ENST00000566251 HOXC9P31274 260 aa12.92□□□□□ -0.34
TUBGCP4-211ENST00000566251 TMPOP42166 694 aaKnown RBP12.92□□□□□ -0.34
TUBGCP4-211ENST00000566251 SLFN5Q08AF3 891 aa12.92□□□□□ -0.34
TUBGCP4-211ENST00000566251 MYH16Q9H6N6 1097 aa12.92□□□□□ -0.34
TUBGCP4-211ENST00000566251 HMOX1P09601 288 aa12.91□□□□□ -0.34
TUBGCP4-211ENST00000566251 RIPK4P57078 832 aa12.91□□□□□ -0.34
TUBGCP4-211ENST00000566251 ERICH6BQ5W0A0 696 aa12.91□□□□□ -0.34
TUBGCP4-211ENST00000566251 USP19O94966 1318 aa12.9□□□□□ -0.34
TUBGCP4-211ENST00000566251 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
TUBGCP4-211ENST00000566251 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
TUBGCP4-211ENST00000566251 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
TUBGCP4-211ENST00000566251 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.34
TUBGCP4-211ENST00000566251 RRP7AQ9Y3A4 280 aaKnown RBP12.9□□□□□ -0.34
TUBGCP4-211ENST00000566251 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
TUBGCP4-211ENST00000566251 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
TUBGCP4-211ENST00000566251 ARHGEF25Q86VW2 580 aa12.89□□□□□ -0.35
TUBGCP4-211ENST00000566251 IL16Q14005 1332 aa12.88□□□□□ -0.35
TUBGCP4-211ENST00000566251 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
TUBGCP4-211ENST00000566251 TRMT2AQ8IZ69 625 aaKnown RBP12.88□□□□□ -0.35
TUBGCP4-211ENST00000566251 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
TUBGCP4-211ENST00000566251 XIRP1Q702N8 1843 aaKnown RBP12.88□□□□□ -0.35
TUBGCP4-211ENST00000566251 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
TUBGCP4-211ENST00000566251 C1QBPQ07021 282 aaKnown RBP12.87□□□□□ -0.35
TUBGCP4-211ENST00000566251 DUSP27Q5VZP5 1158 aa12.87□□□□□ -0.35
TUBGCP4-211ENST00000566251 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.87□□□□□ -0.35
TUBGCP4-211ENST00000566251 SLIT3O75094 1523 aa12.87□□□□□ -0.35
TUBGCP4-211ENST00000566251 TRPM3Q9HCF6 1732 aaPredicted RBP12.86□□□□□ -0.35
TUBGCP4-211ENST00000566251 DDX17Q92841 729 aaKnown RBP12.86□□□□□ -0.35
TUBGCP4-211ENST00000566251 LTV1Q96GA3 475 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms