RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 ELL2O00472 640 aaPredicted RBP28.32■■■□□ 2.12
SPSB3-206ENST00000564709 AATKQ6ZMQ8 1374 aa28.32■■■□□ 2.12
SPSB3-206ENST00000564709 ROBO2Q9HCK4 1378 aa28.31■■■□□ 2.12
SPSB3-206ENST00000564709 TBC1D32Q96NH3 1257 aa28.31■■■□□ 2.12
SPSB3-206ENST00000564709 FRAT2O75474 233 aaPredicted RBP28.3■■■□□ 2.12
SPSB3-206ENST00000564709 NUTM2FA1L443 756 aa28.3■■■□□ 2.12
SPSB3-206ENST00000564709 MBIPQ9NS73 344 aa28.3■■■□□ 2.12
SPSB3-206ENST00000564709 TMEM2Q9UHN6 1383 aa28.29■■■□□ 2.12
SPSB3-206ENST00000564709 VAMP4O75379 141 aa28.29■■■□□ 2.12
SPSB3-206ENST00000564709 HDGFP51858 240 aaKnown RBP28.29■■■□□ 2.12
SPSB3-206ENST00000564709 FAM83GA6ND36 823 aa28.29■■■□□ 2.12
SPSB3-206ENST00000564709 SMC5Q8IY18 1101 aa28.29■■■□□ 2.12
SPSB3-206ENST00000564709 BECN1Q14457 450 aa28.28■■■□□ 2.12
SPSB3-206ENST00000564709 IFT57Q9NWB7 429 aa28.27■■■□□ 2.12
SPSB3-206ENST00000564709 GNAI1P63096 354 aa28.27■■■□□ 2.12
SPSB3-206ENST00000564709 CALD1Q05682 793 aaKnown RBP28.27■■■□□ 2.12
SPSB3-206ENST00000564709 MRPL50Q8N5N7 158 aaKnown RBP28.27■■■□□ 2.12
SPSB3-206ENST00000564709 DCTN1Q14203 1278 aa28.26■■■□□ 2.11
SPSB3-206ENST00000564709 SIRT1Q96EB6 747 aa28.26■■■□□ 2.11
SPSB3-206ENST00000564709 SLKQ9H2G2 1235 aaPredicted RBP28.26■■■□□ 2.11
SPSB3-206ENST00000564709 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.26■■■□□ 2.11
SPSB3-206ENST00000564709 ADAMTS13Q76LX8 1427 aa28.25■■■□□ 2.11
SPSB3-206ENST00000564709 ZNF853P0CG23 659 aa28.24■■■□□ 2.11
SPSB3-206ENST00000564709 C1orf115Q9H7X2 142 aa28.24■■■□□ 2.11
SPSB3-206ENST00000564709 MFAP1P55081 439 aaKnown RBP28.23■■■□□ 2.11
SPSB3-206ENST00000564709 ZNF428Q96B54 188 aa28.23■■■□□ 2.11
SPSB3-206ENST00000564709 BRPF1P55201 1214 aaPredicted RBP28.23■■■□□ 2.11
SPSB3-206ENST00000564709 AEBP1Q8IUX7 1158 aa28.23■■■□□ 2.11
SPSB3-206ENST00000564709 TWISTNBQ3B726 338 aaPredicted RBP28.22■■■□□ 2.11
SPSB3-206ENST00000564709 LNPKQ9C0E8 428 aa28.22■■■□□ 2.11
SPSB3-206ENST00000564709 C8orf58Q8NAV2 365 aa28.21■■■□□ 2.11
SPSB3-206ENST00000564709 ZNF692Q9BU19 519 aaPredicted RBP28.21■■■□□ 2.11
SPSB3-206ENST00000564709 PTCH1Q13635 1447 aa28.21■■■□□ 2.11
SPSB3-206ENST00000564709 LTKP29376 864 aa28.21■■■□□ 2.11
SPSB3-206ENST00000564709 GSE1Q14687 1217 aa28.21■■■□□ 2.11
SPSB3-206ENST00000564709 NRKQ7Z2Y5 1582 aa28.21■■■□□ 2.11
SPSB3-206ENST00000564709 ACEP12821 1306 aa28.19■■■□□ 2.1
SPSB3-206ENST00000564709 LMOD3Q0VAK6 560 aa28.19■■■□□ 2.1
SPSB3-206ENST00000564709 CFAP44Q96MT7 982 aa28.19■■■□□ 2.1
SPSB3-206ENST00000564709 TBC1D2Q9BYX2 928 aa28.19■■■□□ 2.1
SPSB3-206ENST00000564709 ZBTB7BO15156 539 aaPredicted RBP28.19■■■□□ 2.1
SPSB3-206ENST00000564709 NUCB1Q02818 461 aa28.19■■■□□ 2.1
SPSB3-206ENST00000564709 TOPAZ1Q8N9V7 1692 aa28.18■■■□□ 2.1
SPSB3-206ENST00000564709 TTC21BQ7Z4L5 1316 aa28.18■■■□□ 2.1
SPSB3-206ENST00000564709 EIF4A2Q14240 407 aaKnown RBP28.18■■■□□ 2.1
SPSB3-206ENST00000564709 SOX12O15370 315 aa28.17■■■□□ 2.1
SPSB3-206ENST00000564709 CEBPAP49715 358 aaPredicted RBP28.17■■■□□ 2.1
SPSB3-206ENST00000564709 SULT6B1Q6IMI4 303 aa28.17■■■□□ 2.1
SPSB3-206ENST00000564709 SLC26A8Q96RN1 970 aa28.17■■■□□ 2.1
SPSB3-206ENST00000564709 C22orf23Q9BZE7 217 aa28.16■■■□□ 2.1
SPSB3-206ENST00000564709 PLPPR3Q6T4P5 718 aa28.15■■■□□ 2.1
SPSB3-206ENST00000564709 ARHGAP45Q92619 1136 aa28.15■■■□□ 2.1
SPSB3-206ENST00000564709 PIK3R4Q99570 1358 aa28.15■■■□□ 2.1
SPSB3-206ENST00000564709 CHD1LQ86WJ1 897 aa28.15■■■□□ 2.1
SPSB3-206ENST00000564709 ABCC4O15439 1325 aa28.14■■■□□ 2.1
SPSB3-206ENST00000564709 PEAK1Q9H792 1746 aa28.14■■■□□ 2.09
SPSB3-206ENST00000564709 PLEKHG1Q9ULL1 1385 aa28.13■■■□□ 2.09
SPSB3-206ENST00000564709 OVOS2A0A0J9YW53 1432 aa28.13■■■□□ 2.09
SPSB3-206ENST00000564709 OVOS2Q6IE36 1432 aa28.13■■■□□ 2.09
SPSB3-206ENST00000564709 SPRYD3Q8NCJ5 442 aa28.13■■■□□ 2.09
SPSB3-206ENST00000564709 PTPRUQ92729 1446 aa28.12■■■□□ 2.09
SPSB3-206ENST00000564709 USP6P35125 1406 aa28.11■■■□□ 2.09
SPSB3-206ENST00000564709 HSP90AB2PQ58FF8 381 aa28.11■■■□□ 2.09
SPSB3-206ENST00000564709 ANKRD45Q5TZF3 282 aa28.11■■■□□ 2.09
SPSB3-206ENST00000564709 ANTXR1Q9H6X2 564 aa28.11■■■□□ 2.09
SPSB3-206ENST00000564709 KRT24Q2M2I5 525 aa28.1■■■□□ 2.09
SPSB3-206ENST00000564709 NALCNQ8IZF0 1738 aa28.09■■■□□ 2.09
SPSB3-206ENST00000564709 MCM10Q7L590 875 aa28.09■■■□□ 2.09
SPSB3-206ENST00000564709 SIRT2Q8IXJ6 389 aa28.09■■■□□ 2.09
SPSB3-206ENST00000564709 PLEKHG3A1L390 1219 aa28.08■■■□□ 2.09
SPSB3-206ENST00000564709 IL27Q8NEV9 243 aa28.06■■■□□ 2.08
SPSB3-206ENST00000564709 CHMP4BQ9H444 224 aaKnown RBP28.06■■■□□ 2.08
SPSB3-206ENST00000564709 API5Q9BZZ5 524 aaKnown RBP28.06■■■□□ 2.08
SPSB3-206ENST00000564709 GCC1Q96CN9 775 aa28.05■■■□□ 2.08
SPSB3-206ENST00000564709 RGPD1P0DJD0 1748 aa28.04■■■□□ 2.08
SPSB3-206ENST00000564709 RIMS1Q86UR5 1692 aaKnown RBP28.03■■■□□ 2.08
SPSB3-206ENST00000564709 AMOTL2Q9Y2J4 779 aa28.03■■■□□ 2.08
SPSB3-206ENST00000564709 RGPD8O14715 1765 aaPredicted RBP28.03■■■□□ 2.08
SPSB3-206ENST00000564709 EID1Q9Y6B2 187 aa28.02■■■□□ 2.08
SPSB3-206ENST00000564709 FMN2Q9NZ56 1722 aa28■■■□□ 2.07
SPSB3-206ENST00000564709 USP31Q70CQ4 1352 aa28■■■□□ 2.07
SPSB3-206ENST00000564709 BMP2KLQ5H9B9 411 aa28■■■□□ 2.07
SPSB3-206ENST00000564709 MAP3K19Q56UN5 1328 aa27.98■■■□□ 2.07
SPSB3-206ENST00000564709 SSH2Q76I76 1423 aa27.98■■■□□ 2.07
SPSB3-206ENST00000564709 CHL1O00533 1208 aa27.98■■■□□ 2.07
SPSB3-206ENST00000564709 FOXO3O43524 673 aa27.97■■■□□ 2.07
SPSB3-206ENST00000564709 MIS18AQ9NYP9 233 aa27.97■■■□□ 2.07
SPSB3-206ENST00000564709 BRPF3Q9ULD4 1205 aa27.97■■■□□ 2.07
SPSB3-206ENST00000564709 RGS12O14924 1447 aa27.96■■■□□ 2.07
SPSB3-206ENST00000564709 DIP2AQ14689 1571 aa27.95■■■□□ 2.06
SPSB3-206ENST00000564709 NGDNQ8NEJ9 315 aaKnown RBP27.95■■■□□ 2.06
SPSB3-206ENST00000564709 HSCBQ8IWL3 235 aa27.93■■■□□ 2.06
SPSB3-206ENST00000564709 RBM25P49756 843 aaKnown RBP27.93■■■□□ 2.06
SPSB3-206ENST00000564709 INTS3Q68E01 1043 aaKnown RBP27.92■■■□□ 2.06
SPSB3-206ENST00000564709 CRB1P82279 1406 aa27.92■■■□□ 2.06
SPSB3-206ENST00000564709 SLIT1O75093 1534 aa27.92■■■□□ 2.06
SPSB3-206ENST00000564709 RTN4Q9NQC3 1192 aaKnown RBP27.92■■■□□ 2.06
SPSB3-206ENST00000564709 ARHGEF10O15013 1369 aa27.92■■■□□ 2.06
SPSB3-206ENST00000564709 MSH6P52701 1360 aa27.92■■■□□ 2.06
SPSB3-206ENST00000564709 TTC21AQ8NDW8 1320 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms