RNA–Protein interactions for RNA: ENST00000564534.1

LINC01858-201, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 1 (best) BASIC

Gene LINC01858, Length 1,838 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-201ENST00000564534 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
LINC01858-201ENST00000564534 KRT28Q7Z3Y7 464 aa12.32□□□□□ -0.44
LINC01858-201ENST00000564534 KNSTRNQ9Y448 316 aa12.32□□□□□ -0.44
LINC01858-201ENST00000564534 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
LINC01858-201ENST00000564534 SEC24BO95487 1268 aa12.31□□□□□ -0.44
LINC01858-201ENST00000564534 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
LINC01858-201ENST00000564534 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
LINC01858-201ENST00000564534 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
LINC01858-201ENST00000564534 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
LINC01858-201ENST00000564534 IER5LQ5T953 404 aa12.3□□□□□ -0.44
LINC01858-201ENST00000564534 SOS2Q07890 1332 aaPredicted RBP12.3□□□□□ -0.44
LINC01858-201ENST00000564534 CGNL1Q0VF96 1302 aa12.3□□□□□ -0.44
LINC01858-201ENST00000564534 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
LINC01858-201ENST00000564534 PXDNQ92626 1479 aa12.3□□□□□ -0.44
LINC01858-201ENST00000564534 NRKQ7Z2Y5 1582 aa12.3□□□□□ -0.44
LINC01858-201ENST00000564534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC01858-201ENST00000564534 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
LINC01858-201ENST00000564534 SSH2Q76I76 1423 aa12.3□□□□□ -0.44
LINC01858-201ENST00000564534 PER1O15534 1290 aaPredicted RBP12.29□□□□□ -0.44
LINC01858-201ENST00000564534 PHLPP1O60346 1717 aa12.28□□□□□ -0.44
LINC01858-201ENST00000564534 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
LINC01858-201ENST00000564534 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
LINC01858-201ENST00000564534 LMOD2Q6P5Q4 547 aa12.27□□□□□ -0.44
LINC01858-201ENST00000564534 ABTB2Q8N961 1025 aa12.27□□□□□ -0.44
LINC01858-201ENST00000564534 ARHGEF10O15013 1369 aa12.27□□□□□ -0.45
LINC01858-201ENST00000564534 NSD2O96028 1365 aa12.27□□□□□ -0.45
LINC01858-201ENST00000564534 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
LINC01858-201ENST00000564534 LRRC59Q96AG4 307 aaKnown RBP12.27□□□□□ -0.45
LINC01858-201ENST00000564534 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
LINC01858-201ENST00000564534 SPATA31A3Q5VYP0 1347 aa12.26□□□□□ -0.45
LINC01858-201ENST00000564534 PSEN1P49768 467 aa12.26□□□□□ -0.45
LINC01858-201ENST00000564534 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
LINC01858-201ENST00000564534 NPC1L1Q9UHC9 1359 aa12.26□□□□□ -0.45
LINC01858-201ENST00000564534 FYB1O15117 783 aa12.25□□□□□ -0.45
LINC01858-201ENST00000564534 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
LINC01858-201ENST00000564534 NME9Q86XW9 330 aa12.25□□□□□ -0.45
LINC01858-201ENST00000564534 COL16A1Q07092 1604 aaPredicted RBP12.25□□□□□ -0.45
LINC01858-201ENST00000564534 PIK3C2AO00443 1686 aa12.25□□□□□ -0.45
LINC01858-201ENST00000564534 ALS2Q96Q42 1657 aa12.25□□□□□ -0.45
LINC01858-201ENST00000564534 NLRP6P59044 892 aa12.25□□□□□ -0.45
LINC01858-201ENST00000564534 FBXO41Q8TF61 875 aa12.25□□□□□ -0.45
LINC01858-201ENST00000564534 COG3Q96JB2 828 aa12.25□□□□□ -0.45
LINC01858-201ENST00000564534 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
LINC01858-201ENST00000564534 NLRP13Q86W25 1043 aa12.24□□□□□ -0.45
LINC01858-201ENST00000564534 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
LINC01858-201ENST00000564534 USP31Q70CQ4 1352 aa12.24□□□□□ -0.45
LINC01858-201ENST00000564534 POTEB2H3BUK9 544 aa12.23□□□□□ -0.45
LINC01858-201ENST00000564534 HSPA1LP34931 641 aa12.23□□□□□ -0.45
LINC01858-201ENST00000564534 CNGB1Q14028 1251 aaPredicted RBP12.23□□□□□ -0.45
LINC01858-201ENST00000564534 NUTM2GQ5VZR2 741 aa12.23□□□□□ -0.45
LINC01858-201ENST00000564534 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
LINC01858-201ENST00000564534 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
LINC01858-201ENST00000564534 ANKRD26Q9UPS8 1709 aa12.22□□□□□ -0.45
LINC01858-201ENST00000564534 OVOS2A0A0J9YW53 1432 aa12.22□□□□□ -0.45
LINC01858-201ENST00000564534 OVOS2Q6IE36 1432 aa12.22□□□□□ -0.45
LINC01858-201ENST00000564534 PLCG2P16885 1265 aa12.22□□□□□ -0.45
LINC01858-201ENST00000564534 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
LINC01858-201ENST00000564534 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
LINC01858-201ENST00000564534 ANP32CO43423 234 aa12.21□□□□□ -0.46
LINC01858-201ENST00000564534 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.46
LINC01858-201ENST00000564534 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
LINC01858-201ENST00000564534 JCADQ9P266 1359 aa12.2□□□□□ -0.46
LINC01858-201ENST00000564534 MED1Q15648 1581 aaPredicted RBP12.2□□□□□ -0.46
LINC01858-201ENST00000564534 MKRN3Q13064 507 aaKnown RBP12.2□□□□□ -0.46
LINC01858-201ENST00000564534 USP19O94966 1318 aa12.19□□□□□ -0.46
LINC01858-201ENST00000564534 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
LINC01858-201ENST00000564534 RALBP1Q15311 655 aa12.19□□□□□ -0.46
LINC01858-201ENST00000564534 COL22A1Q8NFW1 1626 aaPredicted RBP12.19□□□□□ -0.46
LINC01858-201ENST00000564534 SHPRHQ149N8 1683 aa12.19□□□□□ -0.46
LINC01858-201ENST00000564534 SLIT3O75094 1523 aa12.18□□□□□ -0.46
LINC01858-201ENST00000564534 MARF1Q9Y4F3 1742 aaKnown RBP12.18□□□□□ -0.46
LINC01858-201ENST00000564534 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
LINC01858-201ENST00000564534 POTEFA5A3E0 1075 aa12.18□□□□□ -0.46
LINC01858-201ENST00000564534 TNNT2P45379 298 aaPredicted RBP12.18□□□□□ -0.46
LINC01858-201ENST00000564534 SCUBE2Q9NQ36 999 aa12.18□□□□□ -0.46
LINC01858-201ENST00000564534 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
LINC01858-201ENST00000564534 PHRF1Q9P1Y6 1649 aaKnown RBP12.17□□□□□ -0.46
LINC01858-201ENST00000564534 SOX12O15370 315 aa12.17□□□□□ -0.46
LINC01858-201ENST00000564534 GCP02774 474 aa12.17□□□□□ -0.46
LINC01858-201ENST00000564534 PRKRIP1Q9H875 184 aaPredicted RBP12.17□□□□□ -0.46
LINC01858-201ENST00000564534 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
LINC01858-201ENST00000564534 CRYBG1Q9Y4K1 1723 aa12.16□□□□□ -0.46
LINC01858-201ENST00000564534 AATKQ6ZMQ8 1374 aa12.16□□□□□ -0.46
LINC01858-201ENST00000564534 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
LINC01858-201ENST00000564534 SPATA31A6Q5VVP1 1343 aa12.15□□□□□ -0.46
LINC01858-201ENST00000564534 ABCA3Q99758 1704 aa12.15□□□□□ -0.46
LINC01858-201ENST00000564534 NFAT5O94916 1531 aa12.15□□□□□ -0.46
LINC01858-201ENST00000564534 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
LINC01858-201ENST00000564534 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
LINC01858-201ENST00000564534 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
LINC01858-201ENST00000564534 MYBBP1AQ9BQG0 1328 aaKnown RBP12.14□□□□□ -0.47
LINC01858-201ENST00000564534 ECM2O94769 699 aaPredicted RBP12.14□□□□□ -0.47
LINC01858-201ENST00000564534 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
LINC01858-201ENST00000564534 NUTM2BA6NNL0 878 aaPredicted RBP12.13□□□□□ -0.47
LINC01858-201ENST00000564534 NUTM2EB1AL46 878 aaPredicted RBP12.13□□□□□ -0.47
LINC01858-201ENST00000564534 PPP2R1AP30153 589 aa12.13□□□□□ -0.47
LINC01858-201ENST00000564534 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
LINC01858-201ENST00000564534 NUTM2AQ8IVF1 878 aaPredicted RBP12.13□□□□□ -0.47
LINC01858-201ENST00000564534 CPDO75976 1380 aa12.13□□□□□ -0.47
LINC01858-201ENST00000564534 ZBTB7CA1YPR0 619 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms