RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 ZKSCAN2Q63HK3 967 aa21.23■□□□□ 0.99
CCNF-204ENST00000564333 SMC4Q9NTJ3 1288 aa21.23■□□□□ 0.99
CCNF-204ENST00000564333 PEAK1Q9H792 1746 aa21.22■□□□□ 0.99
CCNF-204ENST00000564333 NPM2Q86SE8 214 aaKnown RBP21.22■□□□□ 0.99
CCNF-204ENST00000564333 FMN2Q9NZ56 1722 aa21.22■□□□□ 0.99
CCNF-204ENST00000564333 NUTM2FA1L443 756 aa21.21■□□□□ 0.99
CCNF-204ENST00000564333 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
CCNF-204ENST00000564333 ZNF142P52746 1687 aaPredicted RBP21.2■□□□□ 0.98
CCNF-204ENST00000564333 RGS3P49796 1198 aa21.19■□□□□ 0.98
CCNF-204ENST00000564333 SSH2Q76I76 1423 aa21.19■□□□□ 0.98
CCNF-204ENST00000564333 MVPQ14764 893 aaKnown RBP21.19■□□□□ 0.98
CCNF-204ENST00000564333 FTSJ3Q8IY81 847 aaKnown RBP21.19■□□□□ 0.98
CCNF-204ENST00000564333 PMFBP1Q8TBY8 1022 aa21.19■□□□□ 0.98
CCNF-204ENST00000564333 SSH1Q8WYL5 1049 aa21.19■□□□□ 0.98
CCNF-204ENST00000564333 RGPD1P0DJD0 1748 aa21.19■□□□□ 0.98
CCNF-204ENST00000564333 DZIP1LQ8IYY4 767 aaKnown RBP21.18■□□□□ 0.98
CCNF-204ENST00000564333 FAM161AQ3B820 660 aa21.17■□□□□ 0.98
CCNF-204ENST00000564333 CALD1Q05682 793 aaKnown RBP21.17■□□□□ 0.98
CCNF-204ENST00000564333 USP31Q70CQ4 1352 aa21.16■□□□□ 0.98
CCNF-204ENST00000564333 DDRGK1Q96HY6 314 aa21.16■□□□□ 0.98
CCNF-204ENST00000564333 USP35Q9P2H5 1018 aa21.16■□□□□ 0.98
CCNF-204ENST00000564333 PIK3C2AO00443 1686 aa21.16■□□□□ 0.98
CCNF-204ENST00000564333 KIF16BQ96L93 1317 aa21.15■□□□□ 0.98
CCNF-204ENST00000564333 TRIM27P14373 513 aa21.15■□□□□ 0.98
CCNF-204ENST00000564333 NBR1Q14596 966 aa21.15■□□□□ 0.98
CCNF-204ENST00000564333 C8orf34Q49A92 452 aa21.15■□□□□ 0.98
CCNF-204ENST00000564333 TTC21AQ8NDW8 1320 aa21.15■□□□□ 0.98
CCNF-204ENST00000564333 LMOD3Q0VAK6 560 aa21.14■□□□□ 0.98
CCNF-204ENST00000564333 PCDHB15Q9Y5E8 787 aa21.14■□□□□ 0.98
CCNF-204ENST00000564333 PIK3R4Q99570 1358 aa21.14■□□□□ 0.97
CCNF-204ENST00000564333 ANKARQ7Z5J8 1434 aa21.14■□□□□ 0.97
CCNF-204ENST00000564333 ATF7IPQ6VMQ6 1270 aa21.14■□□□□ 0.97
CCNF-204ENST00000564333 LAS1LQ9Y4W2 734 aaKnown RBP21.14■□□□□ 0.97
CCNF-204ENST00000564333 ALDH1L2Q3SY69 923 aa21.13■□□□□ 0.97
CCNF-204ENST00000564333 THUMPD2Q9BTF0 503 aaKnown RBP21.13■□□□□ 0.97
CCNF-204ENST00000564333 IFT57Q9NWB7 429 aa21.13■□□□□ 0.97
CCNF-204ENST00000564333 EIF4A2Q14240 407 aaKnown RBP21.12■□□□□ 0.97
CCNF-204ENST00000564333 NOB1Q9ULX3 412 aaKnown RBP21.12■□□□□ 0.97
CCNF-204ENST00000564333 USP54Q70EL1 1684 aa21.11■□□□□ 0.97
CCNF-204ENST00000564333 GNAI1P63096 354 aa21.11■□□□□ 0.97
CCNF-204ENST00000564333 ZNF428Q96B54 188 aa21.11■□□□□ 0.97
CCNF-204ENST00000564333 CHD2O14647 1828 aaKnown RBP21.11■□□□□ 0.97
CCNF-204ENST00000564333 MARF1Q9Y4F3 1742 aaKnown RBP21.1■□□□□ 0.97
CCNF-204ENST00000564333 ADAMTSL3P82987 1691 aa21.09■□□□□ 0.97
CCNF-204ENST00000564333 ITPRIPQ8IWB1 547 aa21.09■□□□□ 0.97
CCNF-204ENST00000564333 RWDD1Q9H446 243 aaPredicted RBP21.09■□□□□ 0.97
CCNF-204ENST00000564333 DDX19BQ9UMR2 479 aa21.09■□□□□ 0.97
CCNF-204ENST00000564333 IPO8O15397 1037 aaKnown RBP21.08■□□□□ 0.97
CCNF-204ENST00000564333 ZNF853P0CG23 659 aa21.08■□□□□ 0.97
CCNF-204ENST00000564333 KCNA6P17658 529 aa21.08■□□□□ 0.97
CCNF-204ENST00000564333 NGDNQ8NEJ9 315 aaKnown RBP21.08■□□□□ 0.97
CCNF-204ENST00000564333 AEBP1Q8IUX7 1158 aa21.08■□□□□ 0.96
CCNF-204ENST00000564333 MBIPQ9NS73 344 aa21.07■□□□□ 0.96
CCNF-204ENST00000564333 SULT6B1Q6IMI4 303 aa21.06■□□□□ 0.96
CCNF-204ENST00000564333 BRPF1P55201 1214 aaPredicted RBP21.06■□□□□ 0.96
CCNF-204ENST00000564333 TMEM57Q8N5G2 664 aa21.06■□□□□ 0.96
CCNF-204ENST00000564333 SBNO1A3KN83 1393 aa21.05■□□□□ 0.96
CCNF-204ENST00000564333 ARHGEF10O15013 1369 aa21.05■□□□□ 0.96
CCNF-204ENST00000564333 SOX12O15370 315 aa21.05■□□□□ 0.96
CCNF-204ENST00000564333 FLT4P35916 1363 aa21.05■□□□□ 0.96
CCNF-204ENST00000564333 HSP90AB2PQ58FF8 381 aa21.04■□□□□ 0.96
CCNF-204ENST00000564333 CFAP44Q96MT7 982 aa21.04■□□□□ 0.96
CCNF-204ENST00000564333 MAP3K19Q56UN5 1328 aa21.04■□□□□ 0.96
CCNF-204ENST00000564333 FAM83GA6ND36 823 aa21.04■□□□□ 0.96
CCNF-204ENST00000564333 VAMP4O75379 141 aa21.04■□□□□ 0.96
CCNF-204ENST00000564333 PDZRN3Q9UPQ7 1066 aa21.03■□□□□ 0.96
CCNF-204ENST00000564333 TSPYL6Q8N831 410 aa21.02■□□□□ 0.96
CCNF-204ENST00000564333 MRPL50Q8N5N7 158 aaKnown RBP21.02■□□□□ 0.95
CCNF-204ENST00000564333 DCTN1Q14203 1278 aa21.01■□□□□ 0.95
CCNF-204ENST00000564333 HDAC1Q13547 482 aaPredicted RBP21■□□□□ 0.95
CCNF-204ENST00000564333 TWISTNBQ3B726 338 aaPredicted RBP21■□□□□ 0.95
CCNF-204ENST00000564333 ANKLE2Q86XL3 938 aa21■□□□□ 0.95
CCNF-204ENST00000564333 KDM4FA0A1W2PPD8 638 aa20.99■□□□□ 0.95
CCNF-204ENST00000564333 ZBTB40Q9NUA8 1239 aa20.98■□□□□ 0.95
CCNF-204ENST00000564333 ARHGAP45Q92619 1136 aa20.98■□□□□ 0.95
CCNF-204ENST00000564333 C8orf58Q8NAV2 365 aa20.97■□□□□ 0.95
CCNF-204ENST00000564333 ELL2O00472 640 aaPredicted RBP20.96■□□□□ 0.95
CCNF-204ENST00000564333 KDRP35968 1356 aa20.96■□□□□ 0.95
CCNF-204ENST00000564333 LTN1O94822 1766 aa20.96■□□□□ 0.95
CCNF-204ENST00000564333 AMPHP49418 695 aa20.96■□□□□ 0.95
CCNF-204ENST00000564333 NLRP6P59044 892 aa20.95■□□□□ 0.94
CCNF-204ENST00000564333 KIF24Q5T7B8 1368 aa20.95■□□□□ 0.94
CCNF-204ENST00000564333 SETD1BQ9UPS6 1966 aaKnown RBP20.95■□□□□ 0.94
CCNF-204ENST00000564333 ABCC4O15439 1325 aa20.94■□□□□ 0.94
CCNF-204ENST00000564333 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
CCNF-204ENST00000564333 IGSF1Q8N6C5 1336 aa20.94■□□□□ 0.94
CCNF-204ENST00000564333 ADGRL3Q9HAR2 1447 aa20.94■□□□□ 0.94
CCNF-204ENST00000564333 MCM10Q7L590 875 aa20.93■□□□□ 0.94
CCNF-204ENST00000564333 DAXXQ9UER7 740 aaPredicted RBP20.93■□□□□ 0.94
CCNF-204ENST00000564333 CRB1P82279 1406 aa20.93■□□□□ 0.94
CCNF-204ENST00000564333 SMC5Q8IY18 1101 aa20.92■□□□□ 0.94
CCNF-204ENST00000564333 CHMP4BQ9H444 224 aaKnown RBP20.92■□□□□ 0.94
CCNF-204ENST00000564333 NWD1Q149M9 1564 aa20.92■□□□□ 0.94
CCNF-204ENST00000564333 NPHP4O75161 1426 aaPredicted RBP20.91■□□□□ 0.94
CCNF-204ENST00000564333 KIAA0232Q92628 1395 aa20.91■□□□□ 0.94
CCNF-204ENST00000564333 CHL1O00533 1208 aa20.9■□□□□ 0.94
CCNF-204ENST00000564333 API5Q9BZZ5 524 aaKnown RBP20.9■□□□□ 0.94
CCNF-204ENST00000564333 PHF8Q9UPP1 1060 aa20.9■□□□□ 0.94
CCNF-204ENST00000564333 NUTM2GQ5VZR2 741 aa20.9■□□□□ 0.94
CCNF-204ENST00000564333 EYA1Q99502 592 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms