RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 ESCO1Q5FWF5 840 aa11.31□□□□□ -0.6
TCF4-221ENST00000563888 FAM182BQ5T319 152 aa11.31□□□□□ -0.6
TCF4-221ENST00000563888 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
TCF4-221ENST00000563888 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
TCF4-221ENST00000563888 ABCC5O15440 1437 aa11.31□□□□□ -0.6
TCF4-221ENST00000563888 MYOM2P54296 1465 aa11.31□□□□□ -0.6
TCF4-221ENST00000563888 UTRNP46939 3433 aa11.3□□□□□ -0.6
TCF4-221ENST00000563888 FOXO3O43524 673 aa11.3□□□□□ -0.6
TCF4-221ENST00000563888 PDIA6Q15084 440 aa11.3□□□□□ -0.6
TCF4-221ENST00000563888 EZH2Q15910 746 aaKnown RBP11.3□□□□□ -0.6
TCF4-221ENST00000563888 TMEM131LA2VDJ0 1609 aa11.3□□□□□ -0.6
TCF4-221ENST00000563888 UNC13BO14795 1591 aa11.29□□□□□ -0.6
TCF4-221ENST00000563888 GLI3P10071 1580 aa11.29□□□□□ -0.6
TCF4-221ENST00000563888 ZNF326Q5BKZ1 582 aaKnown RBP11.29□□□□□ -0.6
TCF4-221ENST00000563888 KANK4Q5T7N3 995 aaPredicted RBP11.29□□□□□ -0.6
TCF4-221ENST00000563888 TBC1D12O60347 775 aa11.28□□□□□ -0.6
TCF4-221ENST00000563888 ONECUT3O60422 494 aaPredicted RBP11.28□□□□□ -0.6
TCF4-221ENST00000563888 C1QTNF8P60827 252 aa11.28□□□□□ -0.6
TCF4-221ENST00000563888 VPS72Q15906 364 aa11.28□□□□□ -0.6
TCF4-221ENST00000563888 NPHP3Q7Z494 1330 aa11.28□□□□□ -0.6
TCF4-221ENST00000563888 MYO5BQ9ULV0 1848 aa11.28□□□□□ -0.6
TCF4-221ENST00000563888 ANKRD30AQ9BXX3 1397 aa11.28□□□□□ -0.6
TCF4-221ENST00000563888 GCC2Q8IWJ2 1684 aa11.27□□□□□ -0.6
TCF4-221ENST00000563888 POTEMA6NI47 508 aa11.27□□□□□ -0.61
TCF4-221ENST00000563888 FAM98CQ17RN3 349 aaKnown RBP11.27□□□□□ -0.61
TCF4-221ENST00000563888 RBM26Q5T8P6 1007 aaKnown RBP11.27□□□□□ -0.61
TCF4-221ENST00000563888 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
TCF4-221ENST00000563888 GPIHBP1Q8IV16 184 aa11.26□□□□□ -0.61
TCF4-221ENST00000563888 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
TCF4-221ENST00000563888 NUTM2FA1L443 756 aa11.25□□□□□ -0.61
TCF4-221ENST00000563888 SNPHO15079 494 aa11.25□□□□□ -0.61
TCF4-221ENST00000563888 POTEGQ6S5H5 508 aa11.25□□□□□ -0.61
TCF4-221ENST00000563888 SLIT2O94813 1529 aa11.25□□□□□ -0.61
TCF4-221ENST00000563888 BRWD3Q6RI45 1802 aa11.24□□□□□ -0.61
TCF4-221ENST00000563888 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
TCF4-221ENST00000563888 CABLES1Q8TDN4 633 aa11.24□□□□□ -0.61
TCF4-221ENST00000563888 DAPK1P53355 1430 aa11.24□□□□□ -0.61
TCF4-221ENST00000563888 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
TCF4-221ENST00000563888 ZMYND10O75800 440 aa11.23□□□□□ -0.61
TCF4-221ENST00000563888 KRI1Q8N9T8 703 aaKnown RBP11.23□□□□□ -0.61
TCF4-221ENST00000563888 CAMKK2Q96RR4 588 aa11.23□□□□□ -0.61
TCF4-221ENST00000563888 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
TCF4-221ENST00000563888 SPON1Q9HCB6 807 aa11.23□□□□□ -0.61
TCF4-221ENST00000563888 COL22A1Q8NFW1 1626 aaPredicted RBP11.23□□□□□ -0.61
TCF4-221ENST00000563888 XRN1Q8IZH2 1706 aaKnown RBP11.23□□□□□ -0.61
TCF4-221ENST00000563888 TRIM37O94972 964 aa11.22□□□□□ -0.61
TCF4-221ENST00000563888 APBA3O96018 575 aa11.22□□□□□ -0.61
TCF4-221ENST00000563888 NBPF8Q3BBV2 869 aa11.21□□□□□ -0.61
TCF4-221ENST00000563888 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
TCF4-221ENST00000563888 NBPF14Q5TI25 921 aa11.21□□□□□ -0.61
TCF4-221ENST00000563888 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
TCF4-221ENST00000563888 PXDNQ92626 1479 aa11.2□□□□□ -0.62
TCF4-221ENST00000563888 ROBO2Q9HCK4 1378 aa11.2□□□□□ -0.62
TCF4-221ENST00000563888 KCNQ2O43526 872 aa11.2□□□□□ -0.62
TCF4-221ENST00000563888 NALCNQ8IZF0 1738 aa11.2□□□□□ -0.62
TCF4-221ENST00000563888 LAMC1P11047 1609 aa11.2□□□□□ -0.62
TCF4-221ENST00000563888 LRPPRCP42704 1394 aaKnown RBP11.19□□□□□ -0.62
TCF4-221ENST00000563888 SPATA31A3Q5VYP0 1347 aa11.19□□□□□ -0.62
TCF4-221ENST00000563888 SPHKAPQ2M3C7 1700 aa11.19□□□□□ -0.62
TCF4-221ENST00000563888 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
TCF4-221ENST00000563888 NINLQ9Y2I6 1382 aa11.18□□□□□ -0.62
TCF4-221ENST00000563888 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
TCF4-221ENST00000563888 KRT28Q7Z3Y7 464 aa11.18□□□□□ -0.62
TCF4-221ENST00000563888 ANKRD50Q9ULJ7 1429 aa11.18□□□□□ -0.62
TCF4-221ENST00000563888 EVI5O60447 810 aa11.17□□□□□ -0.62
TCF4-221ENST00000563888 BTG4Q9NY30 223 aa11.17□□□□□ -0.62
TCF4-221ENST00000563888 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.17□□□□□ -0.62
TCF4-221ENST00000563888 NRXN3Q9Y4C0 1643 aa11.17□□□□□ -0.62
TCF4-221ENST00000563888 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
TCF4-221ENST00000563888 DDX12PQ92771 950 aa11.16□□□□□ -0.62
TCF4-221ENST00000563888 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
TCF4-221ENST00000563888 ADGRL2O95490 1459 aa11.16□□□□□ -0.62
TCF4-221ENST00000563888 ST18O60284 1047 aa11.15□□□□□ -0.62
TCF4-221ENST00000563888 DISP2A7MBM2 1401 aa11.15□□□□□ -0.62
TCF4-221ENST00000563888 MARF1Q9Y4F3 1742 aaKnown RBP11.15□□□□□ -0.63
TCF4-221ENST00000563888 GIGYF1O75420 1035 aaPredicted RBP11.14□□□□□ -0.63
TCF4-221ENST00000563888 PTGER2P43116 358 aa11.14□□□□□ -0.63
TCF4-221ENST00000563888 TMEM132AQ24JP5 1023 aa11.14□□□□□ -0.63
TCF4-221ENST00000563888 FAM196AQ6ZSG2 479 aa11.14□□□□□ -0.63
TCF4-221ENST00000563888 PTCD2Q8WV60 388 aaKnown RBP11.14□□□□□ -0.63
TCF4-221ENST00000563888 CROCC2H7BZ55 1655 aa11.14□□□□□ -0.63
TCF4-221ENST00000563888 PTPN23Q9H3S7 1636 aa11.13□□□□□ -0.63
TCF4-221ENST00000563888 FAM50AQ14320 339 aaKnown RBP11.13□□□□□ -0.63
TCF4-221ENST00000563888 AK7Q96M32 723 aa11.13□□□□□ -0.63
TCF4-221ENST00000563888 CAMTA1Q9Y6Y1 1673 aa11.12□□□□□ -0.63
TCF4-221ENST00000563888 PSME1Q06323 249 aa11.12□□□□□ -0.63
TCF4-221ENST00000563888 STK26Q9P289 416 aa11.12□□□□□ -0.63
TCF4-221ENST00000563888 USP32Q8NFA0 1604 aa11.11□□□□□ -0.63
TCF4-221ENST00000563888 SLC34A2O95436 690 aa11.11□□□□□ -0.63
TCF4-221ENST00000563888 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
TCF4-221ENST00000563888 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
TCF4-221ENST00000563888 RGPD1P0DJD0 1748 aa11.11□□□□□ -0.63
TCF4-221ENST00000563888 PARD3Q8TEW0 1356 aa11.11□□□□□ -0.63
TCF4-221ENST00000563888 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
TCF4-221ENST00000563888 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
TCF4-221ENST00000563888 HFM1A2PYH4 1435 aa11.1□□□□□ -0.63
TCF4-221ENST00000563888 ZBTB7AO95365 584 aa11.1□□□□□ -0.63
TCF4-221ENST00000563888 OSBPP22059 807 aa11.1□□□□□ -0.63
TCF4-221ENST00000563888 NUP155O75694 1391 aa11.1□□□□□ -0.63
TCF4-221ENST00000563888 PDGFDQ9GZP0 370 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms