RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 TRIM27P14373 513 aa12.69□□□□□ -0.38
PDXDC1-210ENST00000563679 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
PDXDC1-210ENST00000563679 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
PDXDC1-210ENST00000563679 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
PDXDC1-210ENST00000563679 RWDD1Q9H446 243 aaPredicted RBP12.69□□□□□ -0.38
PDXDC1-210ENST00000563679 SMC4Q9NTJ3 1288 aa12.69□□□□□ -0.38
PDXDC1-210ENST00000563679 NPM2Q86SE8 214 aaKnown RBP12.68□□□□□ -0.38
PDXDC1-210ENST00000563679 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
PDXDC1-210ENST00000563679 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
PDXDC1-210ENST00000563679 DDX19BQ9UMR2 479 aa12.68□□□□□ -0.38
PDXDC1-210ENST00000563679 TBX22Q9Y458 520 aa12.68□□□□□ -0.38
PDXDC1-210ENST00000563679 TTC21BQ7Z4L5 1316 aa12.67□□□□□ -0.38
PDXDC1-210ENST00000563679 PHACTR3Q96KR7 559 aa12.67□□□□□ -0.38
PDXDC1-210ENST00000563679 USP19O94966 1318 aa12.67□□□□□ -0.38
PDXDC1-210ENST00000563679 RGS3P49796 1198 aa12.66□□□□□ -0.38
PDXDC1-210ENST00000563679 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
PDXDC1-210ENST00000563679 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
PDXDC1-210ENST00000563679 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
PDXDC1-210ENST00000563679 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
PDXDC1-210ENST00000563679 ARHGAP45Q92619 1136 aa12.66□□□□□ -0.38
PDXDC1-210ENST00000563679 IPO8O15397 1037 aaKnown RBP12.66□□□□□ -0.38
PDXDC1-210ENST00000563679 NEFMP07197 916 aa12.66□□□□□ -0.38
PDXDC1-210ENST00000563679 ANKARQ7Z5J8 1434 aa12.65□□□□□ -0.38
PDXDC1-210ENST00000563679 FBLN1P23142 703 aa12.65□□□□□ -0.38
PDXDC1-210ENST00000563679 GNAI1P63096 354 aa12.65□□□□□ -0.38
PDXDC1-210ENST00000563679 FTSJ3Q8IY81 847 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-210ENST00000563679 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
PDXDC1-210ENST00000563679 ZBTB40Q9NUA8 1239 aa12.65□□□□□ -0.38
PDXDC1-210ENST00000563679 NOB1Q9ULX3 412 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-210ENST00000563679 ZNF142P52746 1687 aaPredicted RBP12.64□□□□□ -0.39
PDXDC1-210ENST00000563679 ACEP12821 1306 aa12.64□□□□□ -0.39
PDXDC1-210ENST00000563679 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
PDXDC1-210ENST00000563679 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
PDXDC1-210ENST00000563679 USP35Q9P2H5 1018 aa12.64□□□□□ -0.39
PDXDC1-210ENST00000563679 VAMP4O75379 141 aa12.63□□□□□ -0.39
PDXDC1-210ENST00000563679 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
PDXDC1-210ENST00000563679 EID1Q9Y6B2 187 aa12.63□□□□□ -0.39
PDXDC1-210ENST00000563679 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
PDXDC1-210ENST00000563679 CEP170BQ9Y4F5 1589 aaPredicted RBP12.63□□□□□ -0.39
PDXDC1-210ENST00000563679 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
PDXDC1-210ENST00000563679 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
PDXDC1-210ENST00000563679 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
PDXDC1-210ENST00000563679 KIF24Q5T7B8 1368 aa12.63□□□□□ -0.39
PDXDC1-210ENST00000563679 ARHGEF10O15013 1369 aa12.62□□□□□ -0.39
PDXDC1-210ENST00000563679 HMOX1P09601 288 aa12.62□□□□□ -0.39
PDXDC1-210ENST00000563679 LRRC37A3O60309 1634 aa12.61□□□□□ -0.39
PDXDC1-210ENST00000563679 TMEM57Q8N5G2 664 aa12.61□□□□□ -0.39
PDXDC1-210ENST00000563679 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
PDXDC1-210ENST00000563679 ABCC4O15439 1325 aa12.61□□□□□ -0.39
PDXDC1-210ENST00000563679 EIF4A2Q14240 407 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-210ENST00000563679 RRS1Q15050 365 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-210ENST00000563679 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
PDXDC1-210ENST00000563679 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
PDXDC1-210ENST00000563679 KDRP35968 1356 aa12.6□□□□□ -0.39
PDXDC1-210ENST00000563679 CHD2O14647 1828 aaKnown RBP12.6□□□□□ -0.39
PDXDC1-210ENST00000563679 THEMISQ8N1K5 641 aaPredicted RBP12.6□□□□□ -0.39
PDXDC1-210ENST00000563679 EIF5BO60841 1220 aaKnown RBP12.59□□□□□ -0.39
PDXDC1-210ENST00000563679 ITPRIPQ8IWB1 547 aa12.59□□□□□ -0.39
PDXDC1-210ENST00000563679 CHMP4BQ9H444 224 aaKnown RBP12.59□□□□□ -0.39
PDXDC1-210ENST00000563679 KIAA0232Q92628 1395 aa12.59□□□□□ -0.39
PDXDC1-210ENST00000563679 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
PDXDC1-210ENST00000563679 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
PDXDC1-210ENST00000563679 CRB1P82279 1406 aa12.57□□□□□ -0.4
PDXDC1-210ENST00000563679 ZBTB7BO15156 539 aaPredicted RBP12.57□□□□□ -0.4
PDXDC1-210ENST00000563679 TSPYL6Q8N831 410 aa12.57□□□□□ -0.4
PDXDC1-210ENST00000563679 SLC26A8Q96RN1 970 aa12.57□□□□□ -0.4
PDXDC1-210ENST00000563679 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
PDXDC1-210ENST00000563679 FLT4P35916 1363 aa12.57□□□□□ -0.4
PDXDC1-210ENST00000563679 SEC24BO95487 1268 aa12.57□□□□□ -0.4
PDXDC1-210ENST00000563679 NWD1Q149M9 1564 aa12.56□□□□□ -0.4
PDXDC1-210ENST00000563679 NUCB1Q02818 461 aa12.56□□□□□ -0.4
PDXDC1-210ENST00000563679 NBR1Q14596 966 aa12.56□□□□□ -0.4
PDXDC1-210ENST00000563679 TBC1D32Q96NH3 1257 aa12.56□□□□□ -0.4
PDXDC1-210ENST00000563679 CHL1O00533 1208 aa12.56□□□□□ -0.4
PDXDC1-210ENST00000563679 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
PDXDC1-210ENST00000563679 RGS12O14924 1447 aa12.55□□□□□ -0.4
PDXDC1-210ENST00000563679 TWISTNBQ3B726 338 aaPredicted RBP12.55□□□□□ -0.4
PDXDC1-210ENST00000563679 C8orf58Q8NAV2 365 aa12.55□□□□□ -0.4
PDXDC1-210ENST00000563679 ADAMTSL3P82987 1691 aa12.55□□□□□ -0.4
PDXDC1-210ENST00000563679 AEBP1Q8IUX7 1158 aa12.54□□□□□ -0.4
PDXDC1-210ENST00000563679 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
PDXDC1-210ENST00000563679 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
PDXDC1-210ENST00000563679 HAP1P54257 671 aaPredicted RBP12.54□□□□□ -0.4
PDXDC1-210ENST00000563679 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
PDXDC1-210ENST00000563679 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
PDXDC1-210ENST00000563679 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
PDXDC1-210ENST00000563679 DEKP35659 375 aaKnown RBP12.54□□□□□ -0.4
PDXDC1-210ENST00000563679 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
PDXDC1-210ENST00000563679 HSP90AB2PQ58FF8 381 aa12.53□□□□□ -0.4
PDXDC1-210ENST00000563679 GCC1Q96CN9 775 aa12.53□□□□□ -0.4
PDXDC1-210ENST00000563679 FAM83GA6ND36 823 aa12.52□□□□□ -0.4
PDXDC1-210ENST00000563679 LAS1LQ9Y4W2 734 aaKnown RBP12.52□□□□□ -0.4
PDXDC1-210ENST00000563679 INTS3Q68E01 1043 aaKnown RBP12.52□□□□□ -0.41
PDXDC1-210ENST00000563679 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
PDXDC1-210ENST00000563679 HTATSF1O43719 755 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-210ENST00000563679 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
PDXDC1-210ENST00000563679 FAM208AQ9UK61 1670 aaKnown RBP12.5□□□□□ -0.41
PDXDC1-210ENST00000563679 UPF2Q9HAU5 1272 aaKnown RBP12.5□□□□□ -0.41
PDXDC1-210ENST00000563679 NFAT5O94916 1531 aa12.5□□□□□ -0.41
PDXDC1-210ENST00000563679 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms