RNA–Protein interactions for RNA: ENST00000562100.5

PDPR-204, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, human

TSL 5

Gene PDPR, Length 1,643 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPR-204	ENST00000562100	EMILIN1	Q9Y6C2	1016 aa		11.77	□□□□□ -0.53
PDPR-204	ENST00000562100	KDM2B	Q8NHM5	1336 aa		11.76	□□□□□ -0.53
PDPR-204	ENST00000562100	BCAR3	O75815	825 aa		11.76	□□□□□ -0.53
PDPR-204	ENST00000562100	PROSER2	Q86WR7	435 aa	Predicted RBP	11.76	□□□□□ -0.53
PDPR-204	ENST00000562100	PPM1G	O15355	546 aa	Predicted RBP	11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	CANX	P27824	592 aa	Known RBP	11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	PRKAR2B	P31323	418 aa		11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	RIPK4	P57078	832 aa		11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	NFE2L2	Q16236	605 aa		11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	MSH6	P52701	1360 aa		11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	ROBO1	Q9Y6N7	1651 aa		11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	LMOD3	Q0VAK6	560 aa		11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	ZRANB1	Q9UGI0	708 aa		11.75	□□□□□ -0.53
PDPR-204	ENST00000562100	KIF24	Q5T7B8	1368 aa		11.74	□□□□□ -0.53
PDPR-204	ENST00000562100	UBAP1L	F5GYI3	381 aa		11.74	□□□□□ -0.53
PDPR-204	ENST00000562100	RBM33	Q96EV2	1170 aa	Known RBP	11.74	□□□□□ -0.53
PDPR-204	ENST00000562100	KIF1A	Q12756	1690 aa		11.74	□□□□□ -0.53
PDPR-204	ENST00000562100	CACNA1F	O60840	1977 aa		11.73	□□□□□ -0.53
PDPR-204	ENST00000562100	TOM1	O60784	492 aa		11.73	□□□□□ -0.53
PDPR-204	ENST00000562100	ZNF428	Q96B54	188 aa		11.73	□□□□□ -0.53
PDPR-204	ENST00000562100	SBNO1	A3KN83	1393 aa		11.72	□□□□□ -0.53
PDPR-204	ENST00000562100	ARHGEF10	O15013	1369 aa		11.72	□□□□□ -0.53
PDPR-204	ENST00000562100	RRS1	Q15050	365 aa	Known RBP	11.71	□□□□□ -0.53
PDPR-204	ENST00000562100	NGDN	Q8NEJ9	315 aa	Known RBP	11.71	□□□□□ -0.53
PDPR-204	ENST00000562100	FLT4	P35916	1363 aa		11.71	□□□□□ -0.53
PDPR-204	ENST00000562100	MST1R	Q04912	1400 aa		11.71	□□□□□ -0.53
PDPR-204	ENST00000562100	FBLN1	P23142	703 aa		11.71	□□□□□ -0.54
PDPR-204	ENST00000562100	C19orf44	Q9H6X5	657 aa		11.71	□□□□□ -0.54
PDPR-204	ENST00000562100	KIF16B	Q96L93	1317 aa		11.7	□□□□□ -0.54
PDPR-204	ENST00000562100	HMOX1	P09601	288 aa		11.7	□□□□□ -0.54
PDPR-204	ENST00000562100	EXOSC9	Q06265	439 aa	Known RBP	11.7	□□□□□ -0.54
PDPR-204	ENST00000562100	ALDH1L2	Q3SY69	923 aa		11.7	□□□□□ -0.54
PDPR-204	ENST00000562100	ZKSCAN2	Q63HK3	967 aa		11.7	□□□□□ -0.54
PDPR-204	ENST00000562100	CLUAP1	Q96AJ1	413 aa		11.7	□□□□□ -0.54
PDPR-204	ENST00000562100	IFT57	Q9NWB7	429 aa		11.7	□□□□□ -0.54
PDPR-204	ENST00000562100	LRRC37A3	O60309	1634 aa		11.7	□□□□□ -0.54
PDPR-204	ENST00000562100	NHSL1	Q5SYE7	1610 aa		11.7	□□□□□ -0.54
PDPR-204	ENST00000562100	NUTM2F	A1L443	756 aa		11.69	□□□□□ -0.54
PDPR-204	ENST00000562100	GNAI1	P63096	354 aa		11.69	□□□□□ -0.54
PDPR-204	ENST00000562100	EIF4A2	Q14240	407 aa	Known RBP	11.69	□□□□□ -0.54
PDPR-204	ENST00000562100	TSR2	Q969E8	191 aa	Known RBP	11.69	□□□□□ -0.54
PDPR-204	ENST00000562100	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.69	□□□□□ -0.54
PDPR-204	ENST00000562100	RTL1	A6NKG5	1358 aa		11.68	□□□□□ -0.54
PDPR-204	ENST00000562100	BRPF1	P55201	1214 aa	Predicted RBP	11.68	□□□□□ -0.54
PDPR-204	ENST00000562100	CADPS2	Q86UW7	1296 aa		11.68	□□□□□ -0.54
PDPR-204	ENST00000562100	PMFBP1	Q8TBY8	1022 aa		11.68	□□□□□ -0.54
PDPR-204	ENST00000562100	FRAT1	Q92837	279 aa	Predicted RBP	11.68	□□□□□ -0.54
PDPR-204	ENST00000562100	PHACTR3	Q96KR7	559 aa		11.68	□□□□□ -0.54
PDPR-204	ENST00000562100	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.68	□□□□□ -0.54
PDPR-204	ENST00000562100	PANK1	Q8TE04	598 aa		11.68	□□□□□ -0.54
PDPR-204	ENST00000562100	SMC4	Q9NTJ3	1288 aa		11.68	□□□□□ -0.54
PDPR-204	ENST00000562100	COL16A1	Q07092	1604 aa	Predicted RBP	11.67	□□□□□ -0.54
PDPR-204	ENST00000562100	KDR	P35968	1356 aa		11.67	□□□□□ -0.54
PDPR-204	ENST00000562100	ZNF853	P0CG23	659 aa		11.67	□□□□□ -0.54
PDPR-204	ENST00000562100	COG6	Q9Y2V7	657 aa		11.67	□□□□□ -0.54
PDPR-204	ENST00000562100	MAP3K19	Q56UN5	1328 aa		11.66	□□□□□ -0.54
PDPR-204	ENST00000562100	NFAT5	O94916	1531 aa		11.66	□□□□□ -0.54
PDPR-204	ENST00000562100	PHLPP1	O60346	1717 aa		11.66	□□□□□ -0.54
PDPR-204	ENST00000562100	IPO8	O15397	1037 aa	Known RBP	11.66	□□□□□ -0.54
PDPR-204	ENST00000562100	MVP	Q14764	893 aa	Known RBP	11.66	□□□□□ -0.54
PDPR-204	ENST00000562100	DZIP1L	Q8IYY4	767 aa	Known RBP	11.66	□□□□□ -0.54
PDPR-204	ENST00000562100	C1orf167	Q5SNV9	1468 aa		11.66	□□□□□ -0.54
PDPR-204	ENST00000562100	PIP4K2B	P78356	416 aa		11.65	□□□□□ -0.54
PDPR-204	ENST00000562100	C14orf37	Q86TY3	774 aa		11.65	□□□□□ -0.54
PDPR-204	ENST00000562100	FTSJ3	Q8IY81	847 aa	Known RBP	11.65	□□□□□ -0.54
PDPR-204	ENST00000562100	SSH1	Q8WYL5	1049 aa		11.65	□□□□□ -0.54
PDPR-204	ENST00000562100	SLAIN2	Q9P270	581 aa		11.65	□□□□□ -0.54
PDPR-204	ENST00000562100	PHF8	Q9UPP1	1060 aa		11.65	□□□□□ -0.54
PDPR-204	ENST00000562100	ATF3	P18847	181 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	ANP32A	P39687	249 aa	Known RBP	11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	HAP1	P54257	671 aa	Predicted RBP	11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	ATF7IP	Q6VMQ6	1270 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	CFAP44	Q96MT7	982 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	BACH2	Q9BYV9	841 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	SLIT3	O75094	1523 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	RLBP1	P12271	317 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	PDE4A	P27815	886 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	SULT6B1	Q6IMI4	303 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	BCL2L13	Q9BXK5	485 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	DDX19B	Q9UMR2	479 aa		11.64	□□□□□ -0.55
PDPR-204	ENST00000562100	IGSF1	Q8N6C5	1336 aa		11.63	□□□□□ -0.55
PDPR-204	ENST00000562100	ALS2	Q96Q42	1657 aa		11.63	□□□□□ -0.55
PDPR-204	ENST00000562100	RGPD2	P0DJD1	1756 aa		11.63	□□□□□ -0.55
PDPR-204	ENST00000562100	CAMTA1	Q9Y6Y1	1673 aa		11.63	□□□□□ -0.55
PDPR-204	ENST00000562100	NLRP6	P59044	892 aa		11.63	□□□□□ -0.55
PDPR-204	ENST00000562100	HSP90AB2P	Q58FF8	381 aa		11.63	□□□□□ -0.55
PDPR-204	ENST00000562100	HSPA1L	P34931	641 aa		11.62	□□□□□ -0.55
PDPR-204	ENST00000562100	AMPH	P49418	695 aa		11.62	□□□□□ -0.55
PDPR-204	ENST00000562100	ARHGAP45	Q92619	1136 aa		11.62	□□□□□ -0.55
PDPR-204	ENST00000562100	CHMP4B	Q9H444	224 aa	Known RBP	11.62	□□□□□ -0.55
PDPR-204	ENST00000562100	LMO7	Q8WWI1	1683 aa		11.62	□□□□□ -0.55
PDPR-204	ENST00000562100	FAM208A	Q9UK61	1670 aa	Known RBP	11.62	□□□□□ -0.55
PDPR-204	ENST00000562100	TRIM27	P14373	513 aa		11.61	□□□□□ -0.55
PDPR-204	ENST00000562100	BRINP3	Q76B58	766 aa		11.61	□□□□□ -0.55
PDPR-204	ENST00000562100	AEBP1	Q8IUX7	1158 aa		11.61	□□□□□ -0.55
PDPR-204	ENST00000562100	RWDD1	Q9H446	243 aa	Predicted RBP	11.61	□□□□□ -0.55
PDPR-204	ENST00000562100	MBIP	Q9NS73	344 aa		11.61	□□□□□ -0.55
PDPR-204	ENST00000562100	KIAA0232	Q92628	1395 aa		11.61	□□□□□ -0.55

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