RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	COLQ	Q9Y215	455 aa	Predicted RBP	13.64	□□□□□ -0.23
KNSTRN-215	ENST00000561367	EDC4	Q6P2E9	1401 aa	Known RBP	13.64	□□□□□ -0.23
KNSTRN-215	ENST00000561367	TTC21A	Q8NDW8	1320 aa		13.64	□□□□□ -0.23
KNSTRN-215	ENST00000561367	PXDN	Q92626	1479 aa		13.63	□□□□□ -0.23
KNSTRN-215	ENST00000561367	CD163L1	Q9NR16	1453 aa		13.63	□□□□□ -0.23
KNSTRN-215	ENST00000561367	KRT28	Q7Z3Y7	464 aa		13.63	□□□□□ -0.23
KNSTRN-215	ENST00000561367	POLR3GL	Q9BT43	218 aa		13.63	□□□□□ -0.23
KNSTRN-215	ENST00000561367		A0A1W2PP64	1363 aa		13.62	□□□□□ -0.23
KNSTRN-215	ENST00000561367	ARHGEF10	O15013	1369 aa		13.62	□□□□□ -0.23
KNSTRN-215	ENST00000561367	AKAP12	Q02952	1782 aa		13.62	□□□□□ -0.23
KNSTRN-215	ENST00000561367	SSH2	Q76I76	1423 aa		13.62	□□□□□ -0.23
KNSTRN-215	ENST00000561367	MON2	Q7Z3U7	1717 aa		13.61	□□□□□ -0.23
KNSTRN-215	ENST00000561367	PHLPP1	O60346	1717 aa		13.6	□□□□□ -0.23
KNSTRN-215	ENST00000561367	TNS3	Q68CZ2	1445 aa		13.6	□□□□□ -0.23
KNSTRN-215	ENST00000561367	COL16A1	Q07092	1604 aa	Predicted RBP	13.6	□□□□□ -0.23
KNSTRN-215	ENST00000561367	SPATA31A3	Q5VYP0	1347 aa		13.6	□□□□□ -0.23
KNSTRN-215	ENST00000561367	TTC21B	Q7Z4L5	1316 aa		13.59	□□□□□ -0.23
KNSTRN-215	ENST00000561367	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.59	□□□□□ -0.23
KNSTRN-215	ENST00000561367	NRK	Q7Z2Y5	1582 aa		13.58	□□□□□ -0.23
KNSTRN-215	ENST00000561367	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.58	□□□□□ -0.24
KNSTRN-215	ENST00000561367	PANK3	Q9H999	370 aa		13.58	□□□□□ -0.24
KNSTRN-215	ENST00000561367	CGNL1	Q0VF96	1302 aa		13.58	□□□□□ -0.24
KNSTRN-215	ENST00000561367	NSD2	O96028	1365 aa		13.58	□□□□□ -0.24
KNSTRN-215	ENST00000561367	JCAD	Q9P266	1359 aa		13.58	□□□□□ -0.24
KNSTRN-215	ENST00000561367	KNSTRN	Q9Y448	316 aa		13.57	□□□□□ -0.24
KNSTRN-215	ENST00000561367	HSPA1L	P34931	641 aa		13.56	□□□□□ -0.24
KNSTRN-215	ENST00000561367	NLRP13	Q86W25	1043 aa		13.56	□□□□□ -0.24
KNSTRN-215	ENST00000561367	DDX17	Q92841	729 aa	Known RBP	13.56	□□□□□ -0.24
KNSTRN-215	ENST00000561367	USP31	Q70CQ4	1352 aa		13.56	□□□□□ -0.24
KNSTRN-215	ENST00000561367	NPC1L1	Q9UHC9	1359 aa		13.56	□□□□□ -0.24
KNSTRN-215	ENST00000561367	NSD3	Q9BZ95	1437 aa		13.56	□□□□□ -0.24
KNSTRN-215	ENST00000561367	XPC	Q01831	940 aa	Predicted RBP	13.55	□□□□□ -0.24
KNSTRN-215	ENST00000561367	IER5L	Q5T953	404 aa		13.55	□□□□□ -0.24
KNSTRN-215	ENST00000561367	ABTB2	Q8N961	1025 aa		13.55	□□□□□ -0.24
KNSTRN-215	ENST00000561367	CARD14	Q9BXL6	1004 aa		13.55	□□□□□ -0.24
KNSTRN-215	ENST00000561367	ALS2	Q96Q42	1657 aa		13.55	□□□□□ -0.24
KNSTRN-215	ENST00000561367	MED1	Q15648	1581 aa	Predicted RBP	13.54	□□□□□ -0.24
KNSTRN-215	ENST00000561367	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.54	□□□□□ -0.24
KNSTRN-215	ENST00000561367	SHPRH	Q149N8	1683 aa		13.54	□□□□□ -0.24
KNSTRN-215	ENST00000561367	PER1	O15534	1290 aa	Predicted RBP	13.54	□□□□□ -0.24
KNSTRN-215	ENST00000561367	SPATA31A6	Q5VVP1	1343 aa		13.54	□□□□□ -0.24
KNSTRN-215	ENST00000561367	PNPLA6	Q8IY17	1366 aa		13.54	□□□□□ -0.24
KNSTRN-215	ENST00000561367	USP54	Q70EL1	1684 aa		13.53	□□□□□ -0.24
KNSTRN-215	ENST00000561367	FYB1	O15117	783 aa		13.52	□□□□□ -0.25
KNSTRN-215	ENST00000561367	NLRP6	P59044	892 aa		13.52	□□□□□ -0.25
KNSTRN-215	ENST00000561367	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
KNSTRN-215	ENST00000561367	KCNH5	Q8NCM2	988 aa		13.52	□□□□□ -0.25
KNSTRN-215	ENST00000561367	COG3	Q96JB2	828 aa		13.52	□□□□□ -0.25
KNSTRN-215	ENST00000561367	USP19	O94966	1318 aa		13.52	□□□□□ -0.25
KNSTRN-215	ENST00000561367	PIK3C2A	O00443	1686 aa		13.51	□□□□□ -0.25
KNSTRN-215	ENST00000561367	PSEN1	P49768	467 aa		13.51	□□□□□ -0.25
KNSTRN-215	ENST00000561367	IRX5	P78411	483 aa	Predicted RBP	13.51	□□□□□ -0.25
KNSTRN-215	ENST00000561367	DDX10	Q13206	875 aa	Known RBP	13.51	□□□□□ -0.25
KNSTRN-215	ENST00000561367	LMOD2	Q6P5Q4	547 aa		13.51	□□□□□ -0.25
KNSTRN-215	ENST00000561367	OVOS2	A0A0J9YW53	1432 aa		13.5	□□□□□ -0.25
KNSTRN-215	ENST00000561367	OVOS2	Q6IE36	1432 aa		13.5	□□□□□ -0.25
KNSTRN-215	ENST00000561367	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.5	□□□□□ -0.25
KNSTRN-215	ENST00000561367	SEC24B	O95487	1268 aa		13.49	□□□□□ -0.25
KNSTRN-215	ENST00000561367	NME9	Q86XW9	330 aa		13.49	□□□□□ -0.25
KNSTRN-215	ENST00000561367	SLIT3	O75094	1523 aa		13.49	□□□□□ -0.25
KNSTRN-215	ENST00000561367	KIF20B	Q96Q89	1820 aa		13.48	□□□□□ -0.25
KNSTRN-215	ENST00000561367	RNF25	Q96BH1	459 aa	Predicted RBP	13.48	□□□□□ -0.25
KNSTRN-215	ENST00000561367	GC	P02774	474 aa		13.47	□□□□□ -0.25
KNSTRN-215	ENST00000561367	HAP1	P54257	671 aa	Predicted RBP	13.47	□□□□□ -0.25
KNSTRN-215	ENST00000561367	CPD	O75976	1380 aa		13.46	□□□□□ -0.25
KNSTRN-215	ENST00000561367	KIF24	Q5T7B8	1368 aa		13.46	□□□□□ -0.25
KNSTRN-215	ENST00000561367	GGNBP2	Q9H3C7	697 aa		13.46	□□□□□ -0.25
KNSTRN-215	ENST00000561367	ANKRD26	Q9UPS8	1709 aa		13.46	□□□□□ -0.25
KNSTRN-215	ENST00000561367	AATK	Q6ZMQ8	1374 aa		13.45	□□□□□ -0.26
KNSTRN-215	ENST00000561367	CRYBG1	Q9Y4K1	1723 aa		13.45	□□□□□ -0.26
KNSTRN-215	ENST00000561367	PDAP1	Q13442	181 aa	Known RBP	13.45	□□□□□ -0.26
KNSTRN-215	ENST00000561367	ABCC6	O95255	1503 aa		13.44	□□□□□ -0.26
KNSTRN-215	ENST00000561367	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.44	□□□□□ -0.26
KNSTRN-215	ENST00000561367	NUTM2G	Q5VZR2	741 aa		13.44	□□□□□ -0.26
KNSTRN-215	ENST00000561367	ILDR1	Q86SU0	546 aa	Predicted RBP	13.44	□□□□□ -0.26
KNSTRN-215	ENST00000561367	MORC1	Q86VD1	984 aa		13.44	□□□□□ -0.26
KNSTRN-215	ENST00000561367	ABCA3	Q99758	1704 aa		13.44	□□□□□ -0.26
KNSTRN-215	ENST00000561367	RALBP1	Q15311	655 aa		13.43	□□□□□ -0.26
KNSTRN-215	ENST00000561367	NFAT5	O94916	1531 aa		13.43	□□□□□ -0.26
KNSTRN-215	ENST00000561367	MARF1	Q9Y4F3	1742 aa	Known RBP	13.42	□□□□□ -0.26
KNSTRN-215	ENST00000561367	CABLES1	Q8TDN4	633 aa		13.42	□□□□□ -0.26
KNSTRN-215	ENST00000561367	RTL1	A6NKG5	1358 aa		13.42	□□□□□ -0.26
KNSTRN-215	ENST00000561367	CC2D1B	Q5T0F9	858 aa	Known RBP	13.41	□□□□□ -0.26
KNSTRN-215	ENST00000561367	ARHGEF25	Q86VW2	580 aa		13.41	□□□□□ -0.26
KNSTRN-215	ENST00000561367	PARD3	Q8TEW0	1356 aa		13.41	□□□□□ -0.26
KNSTRN-215	ENST00000561367	PLCG2	P16885	1265 aa		13.4	□□□□□ -0.26
KNSTRN-215	ENST00000561367	PRDM11	Q9NQV5	511 aa		13.4	□□□□□ -0.26
KNSTRN-215	ENST00000561367	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.39	□□□□□ -0.27
KNSTRN-215	ENST00000561367	NUTM2E	B1AL46	878 aa	Predicted RBP	13.39	□□□□□ -0.27
KNSTRN-215	ENST00000561367	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.39	□□□□□ -0.27
KNSTRN-215	ENST00000561367	PDCD7	Q8N8D1	485 aa	Known RBP	13.39	□□□□□ -0.27
KNSTRN-215	ENST00000561367	KIAA0232	Q92628	1395 aa		13.39	□□□□□ -0.27
KNSTRN-215	ENST00000561367	BLM	P54132	1417 aa	Predicted RBP	13.39	□□□□□ -0.27
KNSTRN-215	ENST00000561367	SMG6	Q86US8	1419 aa	Known RBP	13.39	□□□□□ -0.27
KNSTRN-215	ENST00000561367	COL14A1	Q05707	1796 aa	Known RBP	13.38	□□□□□ -0.27
KNSTRN-215	ENST00000561367	FLT4	P35916	1363 aa		13.38	□□□□□ -0.27
KNSTRN-215	ENST00000561367	ZC3H6	P61129	1189 aa	Known RBP	13.38	□□□□□ -0.27
KNSTRN-215	ENST00000561367	MEX3C	Q5U5Q3	659 aa	Known RBP	13.38	□□□□□ -0.27
KNSTRN-215	ENST00000561367	OCEL1	Q9H607	264 aa		13.38	□□□□□ -0.27
KNSTRN-215	ENST00000561367	LRP6	O75581	1613 aa		13.38	□□□□□ -0.27

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