RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 MYO3AQ8NEV4 1616 aa20.27■□□□□ 0.83
TPM1-228ENST00000560975 USP26Q9BXU7 913 aa20.26■□□□□ 0.83
TPM1-228ENST00000560975 PLEKHM2Q8IWE5 1019 aa20.26■□□□□ 0.83
TPM1-228ENST00000560975 ATAD2Q6PL18 1390 aa20.26■□□□□ 0.83
TPM1-228ENST00000560975 TSPYL6Q8N831 410 aa20.25■□□□□ 0.83
TPM1-228ENST00000560975 QRICH2Q9H0J4 1663 aa20.25■□□□□ 0.83
TPM1-228ENST00000560975 APBB1O00213 710 aa20.25■□□□□ 0.83
TPM1-228ENST00000560975 DNTTIP2Q5QJE6 756 aaKnown RBP20.25■□□□□ 0.83
TPM1-228ENST00000560975 ANKRD36BQ8N2N9 1353 aa20.25■□□□□ 0.83
TPM1-228ENST00000560975 TSC1Q92574 1164 aa20.24■□□□□ 0.83
TPM1-228ENST00000560975 C14orf93Q9H972 538 aaKnown RBP20.24■□□□□ 0.83
TPM1-228ENST00000560975 EVC2Q86UK5 1308 aa20.24■□□□□ 0.83
TPM1-228ENST00000560975 MRPL50Q8N5N7 158 aaKnown RBP20.24■□□□□ 0.83
TPM1-228ENST00000560975 ARHGAP31Q2M1Z3 1444 aa20.23■□□□□ 0.83
TPM1-228ENST00000560975 SMAP1Q8IYB5 467 aaPredicted RBP20.23■□□□□ 0.83
TPM1-228ENST00000560975 OTUD7AQ8TE49 926 aaPredicted RBP20.23■□□□□ 0.83
TPM1-228ENST00000560975 KIF1BO60333 1816 aa20.23■□□□□ 0.83
TPM1-228ENST00000560975 ST18O60284 1047 aa20.22■□□□□ 0.83
TPM1-228ENST00000560975 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
TPM1-228ENST00000560975 CWC22Q9HCG8 908 aaKnown RBP20.22■□□□□ 0.83
TPM1-228ENST00000560975 MROH2AA6NES4 1674 aa20.22■□□□□ 0.83
TPM1-228ENST00000560975 NSD2O96028 1365 aa20.22■□□□□ 0.83
TPM1-228ENST00000560975 ZFYVE16Q7Z3T8 1539 aa20.22■□□□□ 0.83
TPM1-228ENST00000560975 MCM5P33992 734 aa20.22■□□□□ 0.83
TPM1-228ENST00000560975 MTERF4Q7Z6M4 381 aaKnown RBP20.22■□□□□ 0.83
TPM1-228ENST00000560975 MED14O60244 1454 aa20.21■□□□□ 0.83
TPM1-228ENST00000560975 VAMP4O75379 141 aa20.21■□□□□ 0.83
TPM1-228ENST00000560975 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
TPM1-228ENST00000560975 CHMP4BQ9H444 224 aaKnown RBP20.21■□□□□ 0.83
TPM1-228ENST00000560975 FOXD4L6Q3SYB3 417 aaPredicted RBP20.21■□□□□ 0.83
TPM1-228ENST00000560975 FOXD4L3Q6VB84 417 aaPredicted RBP20.21■□□□□ 0.83
TPM1-228ENST00000560975 A0A0U1RQG5 324 aaPredicted RBP20.2■□□□□ 0.82
TPM1-228ENST00000560975 SRPK2P78362 688 aaKnown RBP20.2■□□□□ 0.82
TPM1-228ENST00000560975 USP32Q8NFA0 1604 aa20.2■□□□□ 0.82
TPM1-228ENST00000560975 PRKAR2BP31323 418 aa20.2■□□□□ 0.82
TPM1-228ENST00000560975 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
TPM1-228ENST00000560975 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.2■□□□□ 0.82
TPM1-228ENST00000560975 ZNF830Q96NB3 372 aaPredicted RBP20.19■□□□□ 0.82
TPM1-228ENST00000560975 FBLN1P23142 703 aa20.19■□□□□ 0.82
TPM1-228ENST00000560975 KIAA2012Q0VF49 1180 aa20.19■□□□□ 0.82
TPM1-228ENST00000560975 NRXN1Q9ULB1 1477 aa20.19■□□□□ 0.82
TPM1-228ENST00000560975 DEPDC5O75140 1603 aa20.19■□□□□ 0.82
TPM1-228ENST00000560975 A0A1W2PP64 1363 aa20.18■□□□□ 0.82
TPM1-228ENST00000560975 SMARCA5O60264 1052 aaPredicted RBP20.18■□□□□ 0.82
TPM1-228ENST00000560975 TPRNQ4KMQ1 711 aa20.18■□□□□ 0.82
TPM1-228ENST00000560975 FAM177BA6PVY3 158 aa20.17■□□□□ 0.82
TPM1-228ENST00000560975 HMOX1P09601 288 aa20.17■□□□□ 0.82
TPM1-228ENST00000560975 SDSP20132 328 aa20.17■□□□□ 0.82
TPM1-228ENST00000560975 NOL8Q76FK4 1167 aaKnown RBP20.17■□□□□ 0.82
TPM1-228ENST00000560975 STK26Q9P289 416 aa20.17■□□□□ 0.82
TPM1-228ENST00000560975 FYB1O15117 783 aa20.17■□□□□ 0.82
TPM1-228ENST00000560975 PLEKHG5O94827 1062 aa20.17■□□□□ 0.82
TPM1-228ENST00000560975 CCDC94Q9BW85 323 aaPredicted RBP20.17■□□□□ 0.82
TPM1-228ENST00000560975 ZC3H13Q5T200 1668 aaKnown RBP20.16■□□□□ 0.82
TPM1-228ENST00000560975 COL3A1P02461 1466 aaPredicted RBP20.16■□□□□ 0.82
TPM1-228ENST00000560975 IFT172Q9UG01 1749 aa20.16■□□□□ 0.82
TPM1-228ENST00000560975 TSPY26PQ9H489 355 aa20.16■□□□□ 0.82
TPM1-228ENST00000560975 CFAP65Q6ZU64 1925 aaKnown RBP20.16■□□□□ 0.82
TPM1-228ENST00000560975 C17orf53Q8N3J3 647 aaPredicted RBP20.15■□□□□ 0.82
TPM1-228ENST00000560975 ARHGAP45Q92619 1136 aa20.15■□□□□ 0.82
TPM1-228ENST00000560975 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
TPM1-228ENST00000560975 PPRC1Q5VV67 1664 aaKnown RBP20.15■□□□□ 0.82
TPM1-228ENST00000560975 BRPF1P55201 1214 aaPredicted RBP20.15■□□□□ 0.82
TPM1-228ENST00000560975 ABCC4O15439 1325 aa20.15■□□□□ 0.82
TPM1-228ENST00000560975 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.82
TPM1-228ENST00000560975 CASC1Q6TDU7 716 aa20.14■□□□□ 0.82
TPM1-228ENST00000560975 DCTPP1Q9H773 170 aa20.14■□□□□ 0.81
TPM1-228ENST00000560975 TULP4Q9NRJ4 1543 aa20.14■□□□□ 0.81
TPM1-228ENST00000560975 VWDEQ8N2E2 1590 aa20.14■□□□□ 0.81
TPM1-228ENST00000560975 NEURL4Q96JN8 1562 aa20.14■□□□□ 0.81
TPM1-228ENST00000560975 INO80Q9ULG1 1556 aaPredicted RBP20.14■□□□□ 0.81
TPM1-228ENST00000560975 MBD3O95983 291 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 GDPD2Q9HCC8 539 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 ADGRB1O14514 1584 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 NEK4P51957 841 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 CBX1P83916 185 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 PTCH1Q13635 1447 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 MYRIPQ8NFW9 859 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 ZNF428Q96B54 188 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 ERCC6L2Q5T890 1561 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 PIK3R4Q99570 1358 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 TWISTNBQ3B726 338 aaPredicted RBP20.13■□□□□ 0.81
TPM1-228ENST00000560975 MBIPQ9NS73 344 aa20.13■□□□□ 0.81
TPM1-228ENST00000560975 CFAP44Q96MT7 982 aa20.12■□□□□ 0.81
TPM1-228ENST00000560975 FCHSD2O94868 740 aa20.11■□□□□ 0.81
TPM1-228ENST00000560975 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
TPM1-228ENST00000560975 TMX3Q96JJ7 454 aa20.11■□□□□ 0.81
TPM1-228ENST00000560975 ATP7AQ04656 1500 aa20.11■□□□□ 0.81
TPM1-228ENST00000560975 ZNF710Q8N1W2 664 aa20.1■□□□□ 0.81
TPM1-228ENST00000560975 TTC12Q9H892 705 aaPredicted RBP20.1■□□□□ 0.81
TPM1-228ENST00000560975 GADD45BO75293 160 aaPredicted RBP20.09■□□□□ 0.81
TPM1-228ENST00000560975 REC8O95072 547 aa20.09■□□□□ 0.81
TPM1-228ENST00000560975 DMTNQ08495 405 aa20.09■□□□□ 0.81
TPM1-228ENST00000560975 API5Q9BZZ5 524 aaKnown RBP20.09■□□□□ 0.81
TPM1-228ENST00000560975 ZSCAN20P17040 1043 aaPredicted RBP20.09■□□□□ 0.81
TPM1-228ENST00000560975 USP25Q9UHP3 1055 aa20.09■□□□□ 0.81
TPM1-228ENST00000560975 MINK1Q8N4C8 1332 aaPredicted RBP20.09■□□□□ 0.81
TPM1-228ENST00000560975 GNAI1P63096 354 aa20.08■□□□□ 0.81
TPM1-228ENST00000560975 NFE2L2Q16236 605 aa20.08■□□□□ 0.81
TPM1-228ENST00000560975 EFCAB6Q5THR3 1501 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms