RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
CRTC3-210ENST00000560927 VAMP4O75379 141 aa18.55■□□□□ 0.56
CRTC3-210ENST00000560927 C3P01024 1663 aa18.54■□□□□ 0.56
CRTC3-210ENST00000560927 AKAP12Q02952 1782 aa18.54■□□□□ 0.56
CRTC3-210ENST00000560927 NUTM2FA1L443 756 aa18.54■□□□□ 0.56
CRTC3-210ENST00000560927 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
CRTC3-210ENST00000560927 MBIPQ9NS73 344 aa18.54■□□□□ 0.56
CRTC3-210ENST00000560927 LTKP29376 864 aa18.53■□□□□ 0.56
CRTC3-210ENST00000560927 FAM83GA6ND36 823 aa18.52■□□□□ 0.56
CRTC3-210ENST00000560927 ZNF853P0CG23 659 aa18.52■□□□□ 0.56
CRTC3-210ENST00000560927 SMC5Q8IY18 1101 aa18.52■□□□□ 0.56
CRTC3-210ENST00000560927 IFT57Q9NWB7 429 aa18.52■□□□□ 0.56
CRTC3-210ENST00000560927 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.56
CRTC3-210ENST00000560927 ITSN1Q15811 1721 aa18.52■□□□□ 0.55
CRTC3-210ENST00000560927 GNAI1P63096 354 aa18.51■□□□□ 0.55
CRTC3-210ENST00000560927 MRPL50Q8N5N7 158 aaKnown RBP18.51■□□□□ 0.55
CRTC3-210ENST00000560927 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
CRTC3-210ENST00000560927 CALD1Q05682 793 aaKnown RBP18.51■□□□□ 0.55
CRTC3-210ENST00000560927 ZNF428Q96B54 188 aa18.51■□□□□ 0.55
CRTC3-210ENST00000560927 TBC1D32Q96NH3 1257 aa18.51■□□□□ 0.55
CRTC3-210ENST00000560927 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.51■□□□□ 0.55
CRTC3-210ENST00000560927 DCTN1Q14203 1278 aa18.5■□□□□ 0.55
CRTC3-210ENST00000560927 CEBPAP49715 358 aaPredicted RBP18.5■□□□□ 0.55
CRTC3-210ENST00000560927 ACEP12821 1306 aa18.49■□□□□ 0.55
CRTC3-210ENST00000560927 DLG5Q8TDM6 1919 aa18.49■□□□□ 0.55
CRTC3-210ENST00000560927 AEBP1Q8IUX7 1158 aa18.49■□□□□ 0.55
CRTC3-210ENST00000560927 UPF2Q9HAU5 1272 aaKnown RBP18.49■□□□□ 0.55
CRTC3-210ENST00000560927 TTC21BQ7Z4L5 1316 aa18.49■□□□□ 0.55
CRTC3-210ENST00000560927 C8orf58Q8NAV2 365 aa18.48■□□□□ 0.55
CRTC3-210ENST00000560927 SLC26A8Q96RN1 970 aa18.48■□□□□ 0.55
CRTC3-210ENST00000560927 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
CRTC3-210ENST00000560927 EIF4A2Q14240 407 aaKnown RBP18.47■□□□□ 0.55
CRTC3-210ENST00000560927 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
CRTC3-210ENST00000560927 ZBTB7BO15156 539 aaPredicted RBP18.47■□□□□ 0.55
CRTC3-210ENST00000560927 FRAT2O75474 233 aaPredicted RBP18.47■□□□□ 0.55
CRTC3-210ENST00000560927 PLEKHG1Q9ULL1 1385 aa18.47■□□□□ 0.55
CRTC3-210ENST00000560927 PTCH1Q13635 1447 aa18.46■□□□□ 0.55
CRTC3-210ENST00000560927 PTPRUQ92729 1446 aa18.46■□□□□ 0.55
CRTC3-210ENST00000560927 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
CRTC3-210ENST00000560927 C1orf115Q9H7X2 142 aa18.46■□□□□ 0.55
CRTC3-210ENST00000560927 NRKQ7Z2Y5 1582 aa18.46■□□□□ 0.55
CRTC3-210ENST00000560927 NUCB1Q02818 461 aa18.45■□□□□ 0.54
CRTC3-210ENST00000560927 BECN1Q14457 450 aa18.45■□□□□ 0.54
CRTC3-210ENST00000560927 SULT6B1Q6IMI4 303 aa18.45■□□□□ 0.54
CRTC3-210ENST00000560927 ARHGAP45Q92619 1136 aa18.45■□□□□ 0.54
CRTC3-210ENST00000560927 OVOS2A0A0J9YW53 1432 aa18.45■□□□□ 0.54
CRTC3-210ENST00000560927 OVOS2Q6IE36 1432 aa18.45■□□□□ 0.54
CRTC3-210ENST00000560927 PIK3R4Q99570 1358 aa18.44■□□□□ 0.54
CRTC3-210ENST00000560927 PLEKHG3A1L390 1219 aa18.44■□□□□ 0.54
CRTC3-210ENST00000560927 LNPKQ9C0E8 428 aa18.44■□□□□ 0.54
CRTC3-210ENST00000560927 TOPAZ1Q8N9V7 1692 aa18.44■□□□□ 0.54
CRTC3-210ENST00000560927 USP6P35125 1406 aa18.44■□□□□ 0.54
CRTC3-210ENST00000560927 MFAP1P55081 439 aaKnown RBP18.43■□□□□ 0.54
CRTC3-210ENST00000560927 SLKQ9H2G2 1235 aaPredicted RBP18.43■□□□□ 0.54
CRTC3-210ENST00000560927 ABCC4O15439 1325 aa18.43■□□□□ 0.54
CRTC3-210ENST00000560927 SOX12O15370 315 aa18.43■□□□□ 0.54
CRTC3-210ENST00000560927 HSP90AB2PQ58FF8 381 aa18.43■□□□□ 0.54
CRTC3-210ENST00000560927 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
CRTC3-210ENST00000560927 TBC1D2Q9BYX2 928 aa18.42■□□□□ 0.54
CRTC3-210ENST00000560927 CHD1LQ86WJ1 897 aa18.42■□□□□ 0.54
CRTC3-210ENST00000560927 PEAK1Q9H792 1746 aa18.41■□□□□ 0.54
CRTC3-210ENST00000560927 KRT24Q2M2I5 525 aa18.41■□□□□ 0.54
CRTC3-210ENST00000560927 GSE1Q14687 1217 aa18.4■□□□□ 0.54
CRTC3-210ENST00000560927 SIRT2Q8IXJ6 389 aa18.4■□□□□ 0.54
CRTC3-210ENST00000560927 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
CRTC3-210ENST00000560927 AMOTL2Q9Y2J4 779 aa18.4■□□□□ 0.54
CRTC3-210ENST00000560927 MCM10Q7L590 875 aa18.4■□□□□ 0.54
CRTC3-210ENST00000560927 ANTXR1Q9H6X2 564 aa18.39■□□□□ 0.53
CRTC3-210ENST00000560927 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
CRTC3-210ENST00000560927 SSH2Q76I76 1423 aa18.38■□□□□ 0.53
CRTC3-210ENST00000560927 USP31Q70CQ4 1352 aa18.38■□□□□ 0.53
CRTC3-210ENST00000560927 ANKRD45Q5TZF3 282 aa18.38■□□□□ 0.53
CRTC3-210ENST00000560927 NALCNQ8IZF0 1738 aa18.37■□□□□ 0.53
CRTC3-210ENST00000560927 API5Q9BZZ5 524 aaKnown RBP18.36■□□□□ 0.53
CRTC3-210ENST00000560927 CHMP4BQ9H444 224 aaKnown RBP18.36■□□□□ 0.53
CRTC3-210ENST00000560927 CHL1O00533 1208 aa18.35■□□□□ 0.53
CRTC3-210ENST00000560927 GCC1Q96CN9 775 aa18.35■□□□□ 0.53
CRTC3-210ENST00000560927 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
CRTC3-210ENST00000560927 RGPD1P0DJD0 1748 aa18.35■□□□□ 0.53
CRTC3-210ENST00000560927 SPRYD3Q8NCJ5 442 aa18.34■□□□□ 0.53
CRTC3-210ENST00000560927 ARHGAP23Q9P227 1491 aa18.34■□□□□ 0.53
CRTC3-210ENST00000560927 SLIT1O75093 1534 aa18.33■□□□□ 0.53
CRTC3-210ENST00000560927 TBX22Q9Y458 520 aa18.33■□□□□ 0.53
CRTC3-210ENST00000560927 FOXO3O43524 673 aa18.33■□□□□ 0.52
CRTC3-210ENST00000560927 BMP2KLQ5H9B9 411 aa18.32■□□□□ 0.52
CRTC3-210ENST00000560927 NGDNQ8NEJ9 315 aaKnown RBP18.31■□□□□ 0.52
CRTC3-210ENST00000560927 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
CRTC3-210ENST00000560927 RGS12O14924 1447 aa18.31■□□□□ 0.52
CRTC3-210ENST00000560927 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
CRTC3-210ENST00000560927 CRB1P82279 1406 aa18.31■□□□□ 0.52
CRTC3-210ENST00000560927 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
CRTC3-210ENST00000560927 RGPD8O14715 1765 aaPredicted RBP18.3■□□□□ 0.52
CRTC3-210ENST00000560927 MTHFSDQ2M296 383 aaKnown RBP18.3■□□□□ 0.52
CRTC3-210ENST00000560927 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
CRTC3-210ENST00000560927 RIMS1Q86UR5 1692 aaKnown RBP18.3■□□□□ 0.52
CRTC3-210ENST00000560927 ARHGEF10O15013 1369 aa18.29■□□□□ 0.52
CRTC3-210ENST00000560927 KIAA0232Q92628 1395 aa18.29■□□□□ 0.52
CRTC3-210ENST00000560927 SBNO1A3KN83 1393 aa18.28■□□□□ 0.52
CRTC3-210ENST00000560927 FLT4P35916 1363 aa18.28■□□□□ 0.52
CRTC3-210ENST00000560927 KIF24Q5T7B8 1368 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms