RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 ZNF692Q9BU19 519 aaPredicted RBP22.27■■□□□ 1.16
TRPM1-211ENST00000560658 ZNF853P0CG23 659 aa22.26■■□□□ 1.15
TRPM1-211ENST00000560658 IL13P35225 146 aa22.25■■□□□ 1.15
TRPM1-211ENST00000560658 MON2Q7Z3U7 1717 aa22.25■■□□□ 1.15
TRPM1-211ENST00000560658 CPS1P31327 1500 aa22.24■■□□□ 1.15
TRPM1-211ENST00000560658 MRPL50Q8N5N7 158 aaKnown RBP22.24■■□□□ 1.15
TRPM1-211ENST00000560658 API5Q9BZZ5 524 aaKnown RBP22.24■■□□□ 1.15
TRPM1-211ENST00000560658 VAMP4O75379 141 aa22.24■■□□□ 1.15
TRPM1-211ENST00000560658 BMP2KLQ5H9B9 411 aa22.24■■□□□ 1.15
TRPM1-211ENST00000560658 CHMP5Q9NZZ3 219 aa22.24■■□□□ 1.15
TRPM1-211ENST00000560658 NRXN3Q9Y4C0 1643 aa22.23■■□□□ 1.15
TRPM1-211ENST00000560658 RBM25P49756 843 aaKnown RBP22.23■■□□□ 1.15
TRPM1-211ENST00000560658 L1TD1Q5T7N2 865 aaKnown RBP22.23■■□□□ 1.15
TRPM1-211ENST00000560658 CHD1LQ86WJ1 897 aa22.23■■□□□ 1.15
TRPM1-211ENST00000560658 COG3Q96JB2 828 aa22.23■■□□□ 1.15
TRPM1-211ENST00000560658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.22■■□□□ 1.15
TRPM1-211ENST00000560658 CCDC61Q9Y6R9 512 aa22.22■■□□□ 1.15
TRPM1-211ENST00000560658 SNX21Q969T3 373 aa22.21■■□□□ 1.15
TRPM1-211ENST00000560658 ABCC4O15439 1325 aa22.21■■□□□ 1.15
TRPM1-211ENST00000560658 ZBTB7BO15156 539 aaPredicted RBP22.2■■□□□ 1.15
TRPM1-211ENST00000560658 HSCBQ8IWL3 235 aa22.2■■□□□ 1.15
TRPM1-211ENST00000560658 MAP2P11137 1827 aaKnown RBP22.2■■□□□ 1.14
TRPM1-211ENST00000560658 WAPLQ7Z5K2 1190 aa22.2■■□□□ 1.14
TRPM1-211ENST00000560658 SLKQ9H2G2 1235 aaPredicted RBP22.19■■□□□ 1.14
TRPM1-211ENST00000560658 AKAP12Q02952 1782 aa22.19■■□□□ 1.14
TRPM1-211ENST00000560658 NRKQ7Z2Y5 1582 aa22.19■■□□□ 1.14
TRPM1-211ENST00000560658 MFAP1P55081 439 aaKnown RBP22.18■■□□□ 1.14
TRPM1-211ENST00000560658 NUDT16Q96DE0 195 aaKnown RBP22.18■■□□□ 1.14
TRPM1-211ENST00000560658 C3P01024 1663 aa22.18■■□□□ 1.14
TRPM1-211ENST00000560658 ITSN1Q15811 1721 aa22.17■■□□□ 1.14
TRPM1-211ENST00000560658 CIZ1Q9ULV3 898 aaPredicted RBP22.17■■□□□ 1.14
TRPM1-211ENST00000560658 PTMSP20962 102 aa22.16■■□□□ 1.14
TRPM1-211ENST00000560658 PHACTR3Q96KR7 559 aa22.16■■□□□ 1.14
TRPM1-211ENST00000560658 NCOA3Q9Y6Q9 1424 aa22.16■■□□□ 1.14
TRPM1-211ENST00000560658 IL27Q8NEV9 243 aa22.15■■□□□ 1.14
TRPM1-211ENST00000560658 TWISTNBQ3B726 338 aaPredicted RBP22.14■■□□□ 1.14
TRPM1-211ENST00000560658 ESF1Q9H501 851 aaKnown RBP22.14■■□□□ 1.14
TRPM1-211ENST00000560658 MBIPQ9NS73 344 aa22.14■■□□□ 1.14
TRPM1-211ENST00000560658 EMILIN1Q9Y6C2 1016 aa22.13■■□□□ 1.13
TRPM1-211ENST00000560658 METP08581 1390 aa22.13■■□□□ 1.13
TRPM1-211ENST00000560658 HMOX1P09601 288 aa22.13■■□□□ 1.13
TRPM1-211ENST00000560658 NME9Q86XW9 330 aa22.13■■□□□ 1.13
TRPM1-211ENST00000560658 DDX11L8A8MPP1 907 aa22.12■■□□□ 1.13
TRPM1-211ENST00000560658 MCM4P33991 863 aa22.12■■□□□ 1.13
TRPM1-211ENST00000560658 ISY1Q9ULR0 285 aaKnown RBP22.11■■□□□ 1.13
TRPM1-211ENST00000560658 KIAA0232Q92628 1395 aa22.11■■□□□ 1.13
TRPM1-211ENST00000560658 LNPKQ9C0E8 428 aa22.1■■□□□ 1.13
TRPM1-211ENST00000560658 TNRQ92752 1358 aa22.1■■□□□ 1.13
TRPM1-211ENST00000560658 ANKRD45Q5TZF3 282 aa22.09■■□□□ 1.13
TRPM1-211ENST00000560658 INTS3Q68E01 1043 aaKnown RBP22.08■■□□□ 1.13
TRPM1-211ENST00000560658 BRPF3Q9ULD4 1205 aa22.08■■□□□ 1.13
TRPM1-211ENST00000560658 TTC21BQ7Z4L5 1316 aa22.08■■□□□ 1.12
TRPM1-211ENST00000560658 TMEM2Q9UHN6 1383 aa22.07■■□□□ 1.12
TRPM1-211ENST00000560658 PLEKHG3A1L390 1219 aa22.07■■□□□ 1.12
TRPM1-211ENST00000560658 FAM43AQ8N2R8 423 aa22.07■■□□□ 1.12
TRPM1-211ENST00000560658 TXNDC2Q86VQ3 553 aa22.06■■□□□ 1.12
TRPM1-211ENST00000560658 PTPRCP08575 1304 aa22.06■■□□□ 1.12
TRPM1-211ENST00000560658 TOPAZ1Q8N9V7 1692 aa22.06■■□□□ 1.12
TRPM1-211ENST00000560658 TSPYL6Q8N831 410 aa22.06■■□□□ 1.12
TRPM1-211ENST00000560658 SENP3Q9H4L4 574 aaPredicted RBP22.06■■□□□ 1.12
TRPM1-211ENST00000560658 OVOS2A0A0J9YW53 1432 aa22.05■■□□□ 1.12
TRPM1-211ENST00000560658 OVOS2Q6IE36 1432 aa22.05■■□□□ 1.12
TRPM1-211ENST00000560658 CDC45O75419 566 aa22.05■■□□□ 1.12
TRPM1-211ENST00000560658 DDIT3P35638 169 aa22.05■■□□□ 1.12
TRPM1-211ENST00000560658 RPAP2Q8IXW5 612 aaPredicted RBP22.05■■□□□ 1.12
TRPM1-211ENST00000560658 DLG5Q8TDM6 1919 aa22.04■■□□□ 1.12
TRPM1-211ENST00000560658 USP31Q70CQ4 1352 aa22.04■■□□□ 1.12
TRPM1-211ENST00000560658 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
TRPM1-211ENST00000560658 C8orf58Q8NAV2 365 aa22.03■■□□□ 1.12
TRPM1-211ENST00000560658 DCTPP1Q9H773 170 aa22.03■■□□□ 1.12
TRPM1-211ENST00000560658 NALCNQ8IZF0 1738 aa22.03■■□□□ 1.12
TRPM1-211ENST00000560658 THUMPD2Q9BTF0 503 aaKnown RBP22.02■■□□□ 1.12
TRPM1-211ENST00000560658 CHL1O00533 1208 aa22.02■■□□□ 1.11
TRPM1-211ENST00000560658 GBP4Q96PP9 640 aa22.02■■□□□ 1.11
TRPM1-211ENST00000560658 UBR1Q8IWV7 1749 aa22.01■■□□□ 1.11
TRPM1-211ENST00000560658 GOLGA6L3A6NEY3 463 aa22.01■■□□□ 1.11
TRPM1-211ENST00000560658 ARHGEF10O15013 1369 aa22.01■■□□□ 1.11
TRPM1-211ENST00000560658 SKOR2Q2VWA4 1001 aaPredicted RBP22.01■■□□□ 1.11
TRPM1-211ENST00000560658 TTC21AQ8NDW8 1320 aa22.01■■□□□ 1.11
TRPM1-211ENST00000560658 HSP90AB1P08238 724 aaKnown RBP22■■□□□ 1.11
TRPM1-211ENST00000560658 SIRT2Q8IXJ6 389 aa22■■□□□ 1.11
TRPM1-211ENST00000560658 ANKRD44Q8N8A2 993 aa22■■□□□ 1.11
TRPM1-211ENST00000560658 USP6P35125 1406 aa21.99■■□□□ 1.11
TRPM1-211ENST00000560658 ADAMTS13Q76LX8 1427 aa21.99■■□□□ 1.11
TRPM1-211ENST00000560658 PRR36Q9H6K5 1346 aa21.99■■□□□ 1.11
TRPM1-211ENST00000560658 FSD2A1L4K1 749 aa21.99■■□□□ 1.11
TRPM1-211ENST00000560658 FBLN1P23142 703 aa21.99■■□□□ 1.11
TRPM1-211ENST00000560658 EIF4A2Q14240 407 aaKnown RBP21.99■■□□□ 1.11
TRPM1-211ENST00000560658 RGPD1P0DJD0 1748 aa21.99■■□□□ 1.11
TRPM1-211ENST00000560658 RRS1Q15050 365 aaKnown RBP21.98■■□□□ 1.11
TRPM1-211ENST00000560658 TBC1D9Q6ZT07 1266 aa21.98■■□□□ 1.11
TRPM1-211ENST00000560658 TRAK2O60296 914 aa21.98■■□□□ 1.11
TRPM1-211ENST00000560658 ZRANB1Q9UGI0 708 aa21.98■■□□□ 1.11
TRPM1-211ENST00000560658 ROBO2Q9HCK4 1378 aa21.97■■□□□ 1.11
TRPM1-211ENST00000560658 MLECQ14165 292 aa21.97■■□□□ 1.11
TRPM1-211ENST00000560658 SOS1Q07889 1333 aaPredicted RBP21.96■■□□□ 1.11
TRPM1-211ENST00000560658 K7ELQ4 463 aaPredicted RBP21.96■■□□□ 1.11
TRPM1-211ENST00000560658 CASC1Q6TDU7 716 aa21.96■■□□□ 1.11
TRPM1-211ENST00000560658 FBXO41Q8TF61 875 aa21.96■■□□□ 1.11
TRPM1-211ENST00000560658 SULT6B1Q6IMI4 303 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms