RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 SLKQ9H2G2 1235 aaPredicted RBP31.13■■■□□ 2.57
SHF-207ENST00000560540 SMC4Q9NTJ3 1288 aa31.13■■■□□ 2.57
SHF-207ENST00000560540 DDX19BQ9UMR2 479 aa31.13■■■□□ 2.57
SHF-207ENST00000560540 CDC42BPGQ6DT37 1551 aa31.12■■■□□ 2.57
SHF-207ENST00000560540 EXOSC9Q06265 439 aaKnown RBP31.11■■■□□ 2.57
SHF-207ENST00000560540 TSR2Q969E8 191 aaKnown RBP31.11■■■□□ 2.57
SHF-207ENST00000560540 TRIM35Q9UPQ4 493 aa31.11■■■□□ 2.57
SHF-207ENST00000560540 CD163L1Q9NR16 1453 aa31.11■■■□□ 2.57
SHF-207ENST00000560540 ZNF335Q9H4Z2 1342 aaPredicted RBP31.1■■■□□ 2.57
SHF-207ENST00000560540 TRIM27P14373 513 aa31.1■■■□□ 2.57
SHF-207ENST00000560540 PPIP5K1Q6PFW1 1433 aa31.1■■■□□ 2.57
SHF-207ENST00000560540 ADGRL3Q9HAR2 1447 aa31.1■■■□□ 2.57
SHF-207ENST00000560540 CCDC61Q9Y6R9 512 aa31.09■■■□□ 2.57
SHF-207ENST00000560540 C14orf37Q86TY3 774 aa31.09■■■□□ 2.57
SHF-207ENST00000560540 ATF7IPQ6VMQ6 1270 aa31.08■■■□□ 2.57
SHF-207ENST00000560540 SSH1Q8WYL5 1049 aa31.07■■■□□ 2.56
SHF-207ENST00000560540 U2SURPO15042 1029 aaKnown RBP31.05■■■□□ 2.56
SHF-207ENST00000560540 TERF2IPQ9NYB0 399 aa31.05■■■□□ 2.56
SHF-207ENST00000560540 TMEM94Q12767 1356 aa31.05■■■□□ 2.56
SHF-207ENST00000560540 SMC5Q8IY18 1101 aa31.04■■■□□ 2.56
SHF-207ENST00000560540 PNNQ9H307 717 aaKnown RBP31.04■■■□□ 2.56
SHF-207ENST00000560540 KIF16BQ96L93 1317 aa31.04■■■□□ 2.56
SHF-207ENST00000560540 PNPLA6Q8IY17 1366 aa31.04■■■□□ 2.56
SHF-207ENST00000560540 GGNBP2Q9H3C7 697 aa31.03■■■□□ 2.56
SHF-207ENST00000560540 FMN2Q9NZ56 1722 aa31.03■■■□□ 2.56
SHF-207ENST00000560540 RGPD8O14715 1765 aaPredicted RBP31.03■■■□□ 2.56
SHF-207ENST00000560540 ANO8Q9HCE9 1232 aaPredicted RBP31.02■■■□□ 2.56
SHF-207ENST00000560540 TOPAZ1Q8N9V7 1692 aa31.02■■■□□ 2.56
SHF-207ENST00000560540 ITPRIPQ8IWB1 547 aa31.02■■■□□ 2.56
SHF-207ENST00000560540 C22orf23Q9BZE7 217 aa31.01■■■□□ 2.56
SHF-207ENST00000560540 FYB1O15117 783 aa31.01■■■□□ 2.55
SHF-207ENST00000560540 LRRC7Q96NW7 1537 aa30.99■■■□□ 2.55
SHF-207ENST00000560540 L1TD1Q5T7N2 865 aaKnown RBP30.99■■■□□ 2.55
SHF-207ENST00000560540 HDGFL2Q7Z4V5 671 aaPredicted RBP30.99■■■□□ 2.55
SHF-207ENST00000560540 FAM43AQ8N2R8 423 aa30.99■■■□□ 2.55
SHF-207ENST00000560540 IPO8O15397 1037 aaKnown RBP30.98■■■□□ 2.55
SHF-207ENST00000560540 NOB1Q9ULX3 412 aaKnown RBP30.98■■■□□ 2.55
SHF-207ENST00000560540 ALDH1L2Q3SY69 923 aa30.97■■■□□ 2.55
SHF-207ENST00000560540 CPSF1Q10570 1443 aaKnown RBP30.97■■■□□ 2.55
SHF-207ENST00000560540 ZBTB40Q9NUA8 1239 aa30.97■■■□□ 2.55
SHF-207ENST00000560540 DIAPH1O60610 1272 aaKnown RBP30.96■■■□□ 2.55
SHF-207ENST00000560540 RIPK4P57078 832 aa30.96■■■□□ 2.55
SHF-207ENST00000560540 C19orf44Q9H6X5 657 aa30.96■■■□□ 2.55
SHF-207ENST00000560540 ANKARQ7Z5J8 1434 aa30.95■■■□□ 2.55
SHF-207ENST00000560540 TMEM57Q8N5G2 664 aa30.95■■■□□ 2.55
SHF-207ENST00000560540 PLEKHG3A1L390 1219 aa30.94■■■□□ 2.54
SHF-207ENST00000560540 ACEP12821 1306 aa30.94■■■□□ 2.54
SHF-207ENST00000560540 XIRP1Q702N8 1843 aaKnown RBP30.93■■■□□ 2.54
SHF-207ENST00000560540 MFAP1P55081 439 aaKnown RBP30.93■■■□□ 2.54
SHF-207ENST00000560540 ZNF428Q96B54 188 aa30.93■■■□□ 2.54
SHF-207ENST00000560540 BRPF1P55201 1214 aaPredicted RBP30.92■■■□□ 2.54
SHF-207ENST00000560540 CHMP5Q9NZZ3 219 aa30.92■■■□□ 2.54
SHF-207ENST00000560540 ITSN1Q15811 1721 aa30.92■■■□□ 2.54
SHF-207ENST00000560540 NCOA3Q9Y6Q9 1424 aa30.9■■■□□ 2.54
SHF-207ENST00000560540 AKAP12Q02952 1782 aa30.9■■■□□ 2.54
SHF-207ENST00000560540 FCHSD2O94868 740 aa30.89■■■□□ 2.54
SHF-207ENST00000560540 MCM4P33991 863 aa30.89■■■□□ 2.54
SHF-207ENST00000560540 NUCB1Q02818 461 aa30.89■■■□□ 2.54
SHF-207ENST00000560540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.89■■■□□ 2.54
SHF-207ENST00000560540 MON2Q7Z3U7 1717 aa30.87■■■□□ 2.53
SHF-207ENST00000560540 RBM25P49756 843 aaKnown RBP30.85■■■□□ 2.53
SHF-207ENST00000560540 NGDNQ8NEJ9 315 aaKnown RBP30.85■■■□□ 2.53
SHF-207ENST00000560540 ESCO1Q5FWF5 840 aa30.85■■■□□ 2.53
SHF-207ENST00000560540 HSCBQ8IWL3 235 aa30.85■■■□□ 2.53
SHF-207ENST00000560540 ORAI2Q96SN7 254 aa30.85■■■□□ 2.53
SHF-207ENST00000560540 ZNF692Q9BU19 519 aaPredicted RBP30.85■■■□□ 2.53
SHF-207ENST00000560540 EDC4Q6P2E9 1401 aaKnown RBP30.84■■■□□ 2.53
SHF-207ENST00000560540 ATF3P18847 181 aa30.84■■■□□ 2.53
SHF-207ENST00000560540 RSPH6AQ9H0K4 717 aa30.83■■■□□ 2.53
SHF-207ENST00000560540 CHMP4BQ9H444 224 aaKnown RBP30.83■■■□□ 2.53
SHF-207ENST00000560540 MAP2P11137 1827 aaKnown RBP30.83■■■□□ 2.53
SHF-207ENST00000560540 MSH6P52701 1360 aa30.83■■■□□ 2.53
SHF-207ENST00000560540 PHF8Q9UPP1 1060 aa30.83■■■□□ 2.53
SHF-207ENST00000560540 USP6P35125 1406 aa30.82■■■□□ 2.52
SHF-207ENST00000560540 DCCP43146 1447 aa30.82■■■□□ 2.52
SHF-207ENST00000560540 SNX21Q969T3 373 aa30.81■■■□□ 2.52
SHF-207ENST00000560540 C1orf167Q5SNV9 1468 aa30.81■■■□□ 2.52
SHF-207ENST00000560540 CHD1LQ86WJ1 897 aa30.8■■■□□ 2.52
SHF-207ENST00000560540 MST1RQ04912 1400 aa30.8■■■□□ 2.52
SHF-207ENST00000560540 FSD2A1L4K1 749 aa30.8■■■□□ 2.52
SHF-207ENST00000560540 NME9Q86XW9 330 aa30.8■■■□□ 2.52
SHF-207ENST00000560540 CALD1Q05682 793 aaKnown RBP30.79■■■□□ 2.52
SHF-207ENST00000560540 ARHGAP45Q92619 1136 aa30.79■■■□□ 2.52
SHF-207ENST00000560540 NRKQ7Z2Y5 1582 aa30.79■■■□□ 2.52
SHF-207ENST00000560540 BMP2KLQ5H9B9 411 aa30.78■■■□□ 2.52
SHF-207ENST00000560540 SPRYD3Q8NCJ5 442 aa30.78■■■□□ 2.52
SHF-207ENST00000560540 ZRANB1Q9UGI0 708 aa30.78■■■□□ 2.52
SHF-207ENST00000560540 CADPS2Q86UW7 1296 aa30.78■■■□□ 2.52
SHF-207ENST00000560540 PRKAR2BP31323 418 aa30.77■■■□□ 2.52
SHF-207ENST00000560540 TTC21BQ7Z4L5 1316 aa30.77■■■□□ 2.52
SHF-207ENST00000560540 GCC1Q96CN9 775 aa30.77■■■□□ 2.52
SHF-207ENST00000560540 SSH2Q76I76 1423 aa30.77■■■□□ 2.52
SHF-207ENST00000560540 GOLGA6L3A6NEY3 463 aa30.76■■■□□ 2.51
SHF-207ENST00000560540 DDIT3P35638 169 aa30.76■■■□□ 2.51
SHF-207ENST00000560540 DDX11L8A8MPP1 907 aa30.75■■■□□ 2.51
SHF-207ENST00000560540 NFE2L2Q16236 605 aa30.75■■■□□ 2.51
SHF-207ENST00000560540 LNPKQ9C0E8 428 aa30.75■■■□□ 2.51
SHF-207ENST00000560540 CDK12Q9NYV4 1490 aaPredicted RBP30.74■■■□□ 2.51
SHF-207ENST00000560540 POLKQ9UBT6 870 aa30.74■■■□□ 2.51
SHF-207ENST00000560540 LTBP4Q8N2S1 1624 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms