RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 NPATQ14207 1427 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 ARHGEF28Q8N1W1 1705 aaKnown RBP6.38□□□□□ -1.39
LRRC49-221ENST00000560107 KIDINS220Q9ULH0 1771 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 ZBTB7BO15156 539 aaPredicted RBP6.38□□□□□ -1.39
LRRC49-221ENST00000560107 SRPK2P78362 688 aaKnown RBP6.38□□□□□ -1.39
LRRC49-221ENST00000560107 ALDH1L2Q3SY69 923 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 GGT6Q6P531 493 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 PUS7Q96PZ0 661 aaKnown RBP6.38□□□□□ -1.39
LRRC49-221ENST00000560107 AK9Q5TCS8 1911 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 LMTK2Q8IWU2 1503 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 DCAF8L1A6NGE4 600 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 FYB1O15117 783 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 PTMSP20962 102 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 STK26Q9P289 416 aa6.38□□□□□ -1.39
LRRC49-221ENST00000560107 DIAPH1O60610 1272 aaKnown RBP6.37□□□□□ -1.39
LRRC49-221ENST00000560107 NASPP49321 788 aaPredicted RBP6.37□□□□□ -1.39
LRRC49-221ENST00000560107 SIRT2Q8IXJ6 389 aa6.37□□□□□ -1.39
LRRC49-221ENST00000560107 GCC1Q96CN9 775 aa6.37□□□□□ -1.39
LRRC49-221ENST00000560107 DDX49Q9Y6V7 483 aaKnown RBP6.37□□□□□ -1.39
LRRC49-221ENST00000560107 RPGRIP1LQ68CZ1 1315 aa6.37□□□□□ -1.39
LRRC49-221ENST00000560107 ELL2O00472 640 aaPredicted RBP6.37□□□□□ -1.39
LRRC49-221ENST00000560107 BAG4O95429 457 aaKnown RBP6.37□□□□□ -1.39
LRRC49-221ENST00000560107 CCDC173Q0VFZ6 552 aa6.37□□□□□ -1.39
LRRC49-221ENST00000560107 PPP1R9BQ96SB3 815 aa6.37□□□□□ -1.39
LRRC49-221ENST00000560107 MED14O60244 1454 aa6.37□□□□□ -1.39
LRRC49-221ENST00000560107 CAMSAP1Q5T5Y3 1602 aa6.37□□□□□ -1.39
LRRC49-221ENST00000560107 MRPL50Q8N5N7 158 aaKnown RBP6.36□□□□□ -1.39
LRRC49-221ENST00000560107 TSPYL6Q8N831 410 aa6.36□□□□□ -1.39
LRRC49-221ENST00000560107 THUMPD2Q9BTF0 503 aaKnown RBP6.36□□□□□ -1.39
LRRC49-221ENST00000560107 GOLGA6L22H0YM25 854 aa6.36□□□□□ -1.39
LRRC49-221ENST00000560107 VAMP4O75379 141 aa6.36□□□□□ -1.39
LRRC49-221ENST00000560107 FBLN1P23142 703 aa6.36□□□□□ -1.39
LRRC49-221ENST00000560107 PRKAR2BP31323 418 aa6.36□□□□□ -1.39
LRRC49-221ENST00000560107 KLHL40Q2TBA0 621 aa6.36□□□□□ -1.39
LRRC49-221ENST00000560107 KIAA1211Q6ZU35 1233 aa6.36□□□□□ -1.39
LRRC49-221ENST00000560107 ZFP91Q96JP5 570 aaPredicted RBP6.36□□□□□ -1.39
LRRC49-221ENST00000560107 VGFO15240 615 aaPredicted RBP6.35□□□□□ -1.39
LRRC49-221ENST00000560107 CDC45O75419 566 aa6.35□□□□□ -1.39
LRRC49-221ENST00000560107 TPM2P07951 284 aa6.35□□□□□ -1.39
LRRC49-221ENST00000560107 GSPT1P15170 499 aaKnown RBP6.35□□□□□ -1.39
LRRC49-221ENST00000560107 MCTP1Q6DN14 999 aa6.35□□□□□ -1.39
LRRC49-221ENST00000560107 CLEC17AQ6ZS10 378 aa6.35□□□□□ -1.39
LRRC49-221ENST00000560107 ZSCAN30Q86W11 494 aa6.35□□□□□ -1.39
LRRC49-221ENST00000560107 MINK1Q8N4C8 1332 aaPredicted RBP6.35□□□□□ -1.39
LRRC49-221ENST00000560107 NCLP19338 710 aaKnown RBP6.35□□□□□ -1.39
LRRC49-221ENST00000560107 BRPF1P55201 1214 aaPredicted RBP6.35□□□□□ -1.39
LRRC49-221ENST00000560107 PHACTR3Q96KR7 559 aa6.35□□□□□ -1.39
LRRC49-221ENST00000560107 CHMP4BQ9H444 224 aaKnown RBP6.35□□□□□ -1.39
LRRC49-221ENST00000560107 TERF2IPQ9NYB0 399 aa6.35□□□□□ -1.39
LRRC49-221ENST00000560107 LRRC7Q96NW7 1537 aa6.35□□□□□ -1.39
LRRC49-221ENST00000560107 ANKRD26Q9UPS8 1709 aa6.35□□□□□ -1.39
LRRC49-221ENST00000560107 FCHSD2O94868 740 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 HMOX1P09601 288 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 C16orf71Q8IYS4 520 aaPredicted RBP6.34□□□□□ -1.39
LRRC49-221ENST00000560107 ANP32BQ92688 251 aaKnown RBP6.34□□□□□ -1.39
LRRC49-221ENST00000560107 ATAD2Q6PL18 1390 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 PNPLA6Q8IY17 1366 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 PIK3R4Q99570 1358 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 IBTKQ9P2D0 1353 aaPredicted RBP6.34□□□□□ -1.39
LRRC49-221ENST00000560107 CD163L1Q9NR16 1453 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 NEXMIFQ5QGS0 1516 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 PKP1Q13835 747 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 CAVIN1Q6NZI2 390 aaKnown RBP6.34□□□□□ -1.39
LRRC49-221ENST00000560107 PLEKHM2Q8IWE5 1019 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 ARHGAP45Q92619 1136 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 ZNF428Q96B54 188 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 LMBRD1Q9NUN5 540 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 CCDC9Q9Y3X0 531 aaKnown RBP6.34□□□□□ -1.39
LRRC49-221ENST00000560107 PTCH1Q13635 1447 aa6.34□□□□□ -1.39
LRRC49-221ENST00000560107 SIGLEC1Q9BZZ2 1709 aa6.34□□□□□ -1.4
LRRC49-221ENST00000560107 OFD1O75665 1012 aa6.34□□□□□ -1.4
LRRC49-221ENST00000560107 MSNP26038 577 aaKnown RBP6.34□□□□□ -1.4
LRRC49-221ENST00000560107 ZNF445P59923 1031 aa6.34□□□□□ -1.4
LRRC49-221ENST00000560107 ZSCAN23Q3MJ62 389 aa6.34□□□□□ -1.4
LRRC49-221ENST00000560107 PRAM1Q96QH2 718 aa6.34□□□□□ -1.4
LRRC49-221ENST00000560107 ABCC4O15439 1325 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 FAM135BQ49AJ0 1406 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 FRMPD1Q5SYB0 1578 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 CALD1Q05682 793 aaKnown RBP6.33□□□□□ -1.4
LRRC49-221ENST00000560107 RABEP1Q15276 862 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 NFE2L2Q16236 605 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 RBSNQ9H1K0 784 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 MBIPQ9NS73 344 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 CYP2E1P05181 493 aaPredicted RBP6.33□□□□□ -1.4
LRRC49-221ENST00000560107 NUCB2P80303 420 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.33□□□□□ -1.4
LRRC49-221ENST00000560107 C8orf58Q8NAV2 365 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 CHAMP1Q96JM3 812 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 USP26Q9BXU7 913 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 PDCL3Q9H2J4 239 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 CABP1Q9NZU7 370 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 RBM27Q9P2N5 1060 aaKnown RBP6.33□□□□□ -1.4
LRRC49-221ENST00000560107 POLKQ9UBT6 870 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 ABCC3O15438 1527 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 HECW2Q9P2P5 1572 aa6.33□□□□□ -1.4
LRRC49-221ENST00000560107 KNDC1Q76NI1 1749 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 ARHGAP31Q2M1Z3 1444 aa6.32□□□□□ -1.4
LRRC49-221ENST00000560107 PRPF40AO75400 957 aaKnown RBP6.32□□□□□ -1.4
LRRC49-221ENST00000560107 PRIM1P49642 420 aaKnown RBP6.32□□□□□ -1.4
LRRC49-221ENST00000560107 GNAI1P63096 354 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms