RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
LRRC28-216ENST00000559819 CCDC61Q9Y6R9 512 aa12.72□□□□□ -0.37
LRRC28-216ENST00000559819 MFAP1P55081 439 aaKnown RBP12.72□□□□□ -0.37
LRRC28-216ENST00000559819 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
LRRC28-216ENST00000559819 BECN1Q14457 450 aa12.72□□□□□ -0.37
LRRC28-216ENST00000559819 GSE1Q14687 1217 aa12.72□□□□□ -0.37
LRRC28-216ENST00000559819 CDK12Q9NYV4 1490 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-216ENST00000559819 ROBO2Q9HCK4 1378 aa12.7□□□□□ -0.38
LRRC28-216ENST00000559819 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
LRRC28-216ENST00000559819 TNRQ92752 1358 aa12.7□□□□□ -0.38
LRRC28-216ENST00000559819 LNPKQ9C0E8 428 aa12.7□□□□□ -0.38
LRRC28-216ENST00000559819 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
LRRC28-216ENST00000559819 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
LRRC28-216ENST00000559819 ZNF853P0CG23 659 aa12.69□□□□□ -0.38
LRRC28-216ENST00000559819 GNAI1P63096 354 aa12.69□□□□□ -0.38
LRRC28-216ENST00000559819 AEBP1Q8IUX7 1158 aa12.69□□□□□ -0.38
LRRC28-216ENST00000559819 C8orf58Q8NAV2 365 aa12.69□□□□□ -0.38
LRRC28-216ENST00000559819 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
LRRC28-216ENST00000559819 IL27Q8NEV9 243 aa12.69□□□□□ -0.38
LRRC28-216ENST00000559819 MON2Q7Z3U7 1717 aa12.68□□□□□ -0.38
LRRC28-216ENST00000559819 TECPR2O15040 1411 aa12.68□□□□□ -0.38
LRRC28-216ENST00000559819 TWISTNBQ3B726 338 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-216ENST00000559819 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-216ENST00000559819 NUCB1Q02818 461 aa12.68□□□□□ -0.38
LRRC28-216ENST00000559819 C22orf23Q9BZE7 217 aa12.68□□□□□ -0.38
LRRC28-216ENST00000559819 TMEM2Q9UHN6 1383 aa12.67□□□□□ -0.38
LRRC28-216ENST00000559819 KNDC1Q76NI1 1749 aa12.67□□□□□ -0.38
LRRC28-216ENST00000559819 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
LRRC28-216ENST00000559819 CALD1Q05682 793 aaKnown RBP12.67□□□□□ -0.38
LRRC28-216ENST00000559819 C3P01024 1663 aa12.67□□□□□ -0.38
LRRC28-216ENST00000559819 SOX12O15370 315 aa12.67□□□□□ -0.38
LRRC28-216ENST00000559819 PTCH1Q13635 1447 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 LTKP29376 864 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
LRRC28-216ENST00000559819 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
LRRC28-216ENST00000559819 PLPPR3Q6T4P5 718 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 CHD1LQ86WJ1 897 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 SIRT1Q96EB6 747 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 ANTXR1Q9H6X2 564 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 ADAMTS13Q76LX8 1427 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 ZNF428Q96B54 188 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 TTC21BQ7Z4L5 1316 aa12.66□□□□□ -0.38
LRRC28-216ENST00000559819 CEBPAP49715 358 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-216ENST00000559819 KRT24Q2M2I5 525 aa12.65□□□□□ -0.38
LRRC28-216ENST00000559819 ACEP12821 1306 aa12.65□□□□□ -0.38
LRRC28-216ENST00000559819 AKAP12Q02952 1782 aa12.65□□□□□ -0.38
LRRC28-216ENST00000559819 DLG5Q8TDM6 1919 aa12.65□□□□□ -0.38
LRRC28-216ENST00000559819 ITSN1Q15811 1721 aa12.65□□□□□ -0.38
LRRC28-216ENST00000559819 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
LRRC28-216ENST00000559819 SLC26A8Q96RN1 970 aa12.65□□□□□ -0.38
LRRC28-216ENST00000559819 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-216ENST00000559819 KIF13AQ9H1H9 1805 aa12.65□□□□□ -0.38
LRRC28-216ENST00000559819 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.64□□□□□ -0.39
LRRC28-216ENST00000559819 PIK3R4Q99570 1358 aa12.64□□□□□ -0.39
LRRC28-216ENST00000559819 ABCC4O15439 1325 aa12.64□□□□□ -0.39
LRRC28-216ENST00000559819 SIRT2Q8IXJ6 389 aa12.64□□□□□ -0.39
LRRC28-216ENST00000559819 UBR1Q8IWV7 1749 aa12.64□□□□□ -0.39
LRRC28-216ENST00000559819 LMOD3Q0VAK6 560 aa12.64□□□□□ -0.39
LRRC28-216ENST00000559819 ARHGAP45Q92619 1136 aa12.64□□□□□ -0.39
LRRC28-216ENST00000559819 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
LRRC28-216ENST00000559819 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
LRRC28-216ENST00000559819 MCM10Q7L590 875 aa12.63□□□□□ -0.39
LRRC28-216ENST00000559819 HSP90AB2PQ58FF8 381 aa12.63□□□□□ -0.39
LRRC28-216ENST00000559819 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
LRRC28-216ENST00000559819 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
LRRC28-216ENST00000559819 OVOS2A0A0J9YW53 1432 aa12.61□□□□□ -0.39
LRRC28-216ENST00000559819 OVOS2Q6IE36 1432 aa12.61□□□□□ -0.39
LRRC28-216ENST00000559819 PEAK1Q9H792 1746 aa12.6□□□□□ -0.39
LRRC28-216ENST00000559819 USP6P35125 1406 aa12.6□□□□□ -0.39
LRRC28-216ENST00000559819 GCC1Q96CN9 775 aa12.6□□□□□ -0.39
LRRC28-216ENST00000559819 API5Q9BZZ5 524 aaKnown RBP12.6□□□□□ -0.39
LRRC28-216ENST00000559819 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
LRRC28-216ENST00000559819 PLEKHG1Q9ULL1 1385 aa12.6□□□□□ -0.39
LRRC28-216ENST00000559819 MIS18AQ9NYP9 233 aa12.59□□□□□ -0.39
LRRC28-216ENST00000559819 TOPAZ1Q8N9V7 1692 aa12.59□□□□□ -0.39
LRRC28-216ENST00000559819 FOXO3O43524 673 aa12.59□□□□□ -0.39
LRRC28-216ENST00000559819 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
LRRC28-216ENST00000559819 CHMP4BQ9H444 224 aaKnown RBP12.58□□□□□ -0.4
LRRC28-216ENST00000559819 AMOTL2Q9Y2J4 779 aa12.58□□□□□ -0.4
LRRC28-216ENST00000559819 CHL1O00533 1208 aa12.57□□□□□ -0.4
LRRC28-216ENST00000559819 MAP3K19Q56UN5 1328 aa12.57□□□□□ -0.4
LRRC28-216ENST00000559819 RGS12O14924 1447 aa12.56□□□□□ -0.4
LRRC28-216ENST00000559819 HSCBQ8IWL3 235 aa12.56□□□□□ -0.4
LRRC28-216ENST00000559819 RBM25P49756 843 aaKnown RBP12.56□□□□□ -0.4
LRRC28-216ENST00000559819 TBC1D9Q6ZT07 1266 aa12.56□□□□□ -0.4
LRRC28-216ENST00000559819 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
LRRC28-216ENST00000559819 C16orf71Q8IYS4 520 aaPredicted RBP12.55□□□□□ -0.4
LRRC28-216ENST00000559819 SSH2Q76I76 1423 aa12.55□□□□□ -0.4
LRRC28-216ENST00000559819 RIMS1Q86UR5 1692 aaKnown RBP12.55□□□□□ -0.4
LRRC28-216ENST00000559819 GSPT1P15170 499 aaKnown RBP12.54□□□□□ -0.4
LRRC28-216ENST00000559819 MTHFSDQ2M296 383 aaKnown RBP12.54□□□□□ -0.4
LRRC28-216ENST00000559819 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
LRRC28-216ENST00000559819 EID1Q9Y6B2 187 aa12.54□□□□□ -0.4
LRRC28-216ENST00000559819 CRB1P82279 1406 aa12.54□□□□□ -0.4
LRRC28-216ENST00000559819 NGDNQ8NEJ9 315 aaKnown RBP12.54□□□□□ -0.4
LRRC28-216ENST00000559819 KIF2CQ99661 725 aa12.54□□□□□ -0.4
LRRC28-216ENST00000559819 CHMP5Q9NZZ3 219 aa12.54□□□□□ -0.4
LRRC28-216ENST00000559819 MSH6P52701 1360 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms