RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 OVOS2Q6IE36 1432 aa14.22□□□□□ -0.13
SPG11-217ENST00000559511 VIRMAQ69YN4 1812 aaKnown RBP14.21□□□□□ -0.13
SPG11-217ENST00000559511 HMOX1P09601 288 aa14.21□□□□□ -0.13
SPG11-217ENST00000559511 IL13P35225 146 aa14.21□□□□□ -0.13
SPG11-217ENST00000559511 PHACTR3Q96KR7 559 aa14.21□□□□□ -0.13
SPG11-217ENST00000559511 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
SPG11-217ENST00000559511 ANKARQ7Z5J8 1434 aa14.2□□□□□ -0.14
SPG11-217ENST00000559511 RRS1Q15050 365 aaKnown RBP14.2□□□□□ -0.14
SPG11-217ENST00000559511 C8orf34Q49A92 452 aa14.2□□□□□ -0.14
SPG11-217ENST00000559511 PMFBP1Q8TBY8 1022 aa14.2□□□□□ -0.14
SPG11-217ENST00000559511 PIK3C2AO00443 1686 aa14.2□□□□□ -0.14
SPG11-217ENST00000559511 ZKSCAN2Q63HK3 967 aa14.2□□□□□ -0.14
SPG11-217ENST00000559511 PCDHB15Q9Y5E8 787 aa14.2□□□□□ -0.14
SPG11-217ENST00000559511 PEAK1Q9H792 1746 aa14.2□□□□□ -0.14
SPG11-217ENST00000559511 MARF1Q9Y4F3 1742 aaKnown RBP14.19□□□□□ -0.14
SPG11-217ENST00000559511 FAM161AQ3B820 660 aa14.19□□□□□ -0.14
SPG11-217ENST00000559511 SSH1Q8WYL5 1049 aa14.19□□□□□ -0.14
SPG11-217ENST00000559511 SMC4Q9NTJ3 1288 aa14.19□□□□□ -0.14
SPG11-217ENST00000559511 AAMPQ13685 434 aa14.18□□□□□ -0.14
SPG11-217ENST00000559511 NPHP4O75161 1426 aaPredicted RBP14.18□□□□□ -0.14
SPG11-217ENST00000559511 MVPQ14764 893 aaKnown RBP14.18□□□□□ -0.14
SPG11-217ENST00000559511 NFE2L2Q16236 605 aa14.17□□□□□ -0.14
SPG11-217ENST00000559511 TTC21AQ8NDW8 1320 aa14.17□□□□□ -0.14
SPG11-217ENST00000559511 NEFMP07197 916 aa14.17□□□□□ -0.14
SPG11-217ENST00000559511 TRIM27P14373 513 aa14.17□□□□□ -0.14
SPG11-217ENST00000559511 DZIP1LQ8IYY4 767 aaKnown RBP14.17□□□□□ -0.14
SPG11-217ENST00000559511 NGDNQ8NEJ9 315 aaKnown RBP14.17□□□□□ -0.14
SPG11-217ENST00000559511 USP31Q70CQ4 1352 aa14.17□□□□□ -0.14
SPG11-217ENST00000559511 FTSJ3Q8IY81 847 aaKnown RBP14.16□□□□□ -0.14
SPG11-217ENST00000559511 USP54Q70EL1 1684 aa14.16□□□□□ -0.14
SPG11-217ENST00000559511 THUMPD2Q9BTF0 503 aaKnown RBP14.15□□□□□ -0.14
SPG11-217ENST00000559511 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
SPG11-217ENST00000559511 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
SPG11-217ENST00000559511 NWD1Q149M9 1564 aa14.14□□□□□ -0.15
SPG11-217ENST00000559511 ATF7IPQ6VMQ6 1270 aa14.14□□□□□ -0.15
SPG11-217ENST00000559511 RBM33Q96EV2 1170 aaKnown RBP14.14□□□□□ -0.15
SPG11-217ENST00000559511 LAS1LQ9Y4W2 734 aaKnown RBP14.14□□□□□ -0.15
SPG11-217ENST00000559511 ADGRL3Q9HAR2 1447 aa14.13□□□□□ -0.15
SPG11-217ENST00000559511 EIF4A2Q14240 407 aaKnown RBP14.11□□□□□ -0.15
SPG11-217ENST00000559511 ALDH1L2Q3SY69 923 aa14.11□□□□□ -0.15
SPG11-217ENST00000559511 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
SPG11-217ENST00000559511 RWDD1Q9H446 243 aaPredicted RBP14.11□□□□□ -0.15
SPG11-217ENST00000559511 KIF16BQ96L93 1317 aa14.1□□□□□ -0.15
SPG11-217ENST00000559511 ZNF853P0CG23 659 aa14.1□□□□□ -0.15
SPG11-217ENST00000559511 NBR1Q14596 966 aa14.1□□□□□ -0.15
SPG11-217ENST00000559511 AEBP1Q8IUX7 1158 aa14.1□□□□□ -0.15
SPG11-217ENST00000559511 TMEM57Q8N5G2 664 aa14.1□□□□□ -0.15
SPG11-217ENST00000559511 IFT57Q9NWB7 429 aa14.1□□□□□ -0.15
SPG11-217ENST00000559511 PDZRN3Q9UPQ7 1066 aa14.1□□□□□ -0.15
SPG11-217ENST00000559511 FAM83GA6ND36 823 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 SOX12O15370 315 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 CALD1Q05682 793 aaKnown RBP14.09□□□□□ -0.15
SPG11-217ENST00000559511 MBIPQ9NS73 344 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 GNAI1P63096 354 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 HSP90AB2PQ58FF8 381 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 TSPYL6Q8N831 410 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 DDRGK1Q96HY6 314 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 MAP3K19Q56UN5 1328 aa14.09□□□□□ -0.15
SPG11-217ENST00000559511 LTN1O94822 1766 aa14.08□□□□□ -0.15
SPG11-217ENST00000559511 VAMP4O75379 141 aa14.08□□□□□ -0.16
SPG11-217ENST00000559511 STRCP1A6NGW2 1772 aa14.08□□□□□ -0.16
SPG11-217ENST00000559511 IPO8O15397 1037 aaKnown RBP14.08□□□□□ -0.16
SPG11-217ENST00000559511 SULT6B1Q6IMI4 303 aa14.08□□□□□ -0.16
SPG11-217ENST00000559511 ZNF428Q96B54 188 aa14.08□□□□□ -0.16
SPG11-217ENST00000559511 SBNO1A3KN83 1393 aa14.07□□□□□ -0.16
SPG11-217ENST00000559511 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
SPG11-217ENST00000559511 NLRP6P59044 892 aa14.07□□□□□ -0.16
SPG11-217ENST00000559511 LMOD3Q0VAK6 560 aa14.07□□□□□ -0.16
SPG11-217ENST00000559511 DCTN1Q14203 1278 aa14.07□□□□□ -0.16
SPG11-217ENST00000559511 CFAP44Q96MT7 982 aa14.06□□□□□ -0.16
SPG11-217ENST00000559511 ZBTB40Q9NUA8 1239 aa14.06□□□□□ -0.16
SPG11-217ENST00000559511 FLT4P35916 1363 aa14.06□□□□□ -0.16
SPG11-217ENST00000559511 MRPL50Q8N5N7 158 aaKnown RBP14.06□□□□□ -0.16
SPG11-217ENST00000559511 ELL2O00472 640 aaPredicted RBP14.05□□□□□ -0.16
SPG11-217ENST00000559511 SEC24BO95487 1268 aa14.05□□□□□ -0.16
SPG11-217ENST00000559511 HDAC1Q13547 482 aaPredicted RBP14.05□□□□□ -0.16
SPG11-217ENST00000559511 NUTM2GQ5VZR2 741 aa14.05□□□□□ -0.16
SPG11-217ENST00000559511 USP19O94966 1318 aa14.05□□□□□ -0.16
SPG11-217ENST00000559511 ABTB2Q8N961 1025 aa14.05□□□□□ -0.16
SPG11-217ENST00000559511 C8orf58Q8NAV2 365 aa14.05□□□□□ -0.16
SPG11-217ENST00000559511 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
SPG11-217ENST00000559511 TWISTNBQ3B726 338 aaPredicted RBP14.03□□□□□ -0.16
SPG11-217ENST00000559511 ESCO1Q5FWF5 840 aa14.03□□□□□ -0.16
SPG11-217ENST00000559511 SLC4A3P48751 1232 aa14.03□□□□□ -0.16
SPG11-217ENST00000559511 ARHGEF10O15013 1369 aa14.03□□□□□ -0.16
SPG11-217ENST00000559511 AMPHP49418 695 aa14.02□□□□□ -0.16
SPG11-217ENST00000559511 PROSER2Q86WR7 435 aaPredicted RBP14.02□□□□□ -0.16
SPG11-217ENST00000559511 ARHGAP45Q92619 1136 aa14.02□□□□□ -0.17
SPG11-217ENST00000559511 KIF24Q5T7B8 1368 aa14.01□□□□□ -0.17
SPG11-217ENST00000559511 TRPM3Q9HCF6 1732 aaPredicted RBP14.01□□□□□ -0.17
SPG11-217ENST00000559511 NFAT5O94916 1531 aa14.01□□□□□ -0.17
SPG11-217ENST00000559511 SMC5Q8IY18 1101 aa14.01□□□□□ -0.17
SPG11-217ENST00000559511 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
SPG11-217ENST00000559511 KIF1AQ12756 1690 aa14.01□□□□□ -0.17
SPG11-217ENST00000559511 PSME1Q06323 249 aa14□□□□□ -0.17
SPG11-217ENST00000559511 MCM10Q7L590 875 aa14□□□□□ -0.17
SPG11-217ENST00000559511 KDRP35968 1356 aa14□□□□□ -0.17
SPG11-217ENST00000559511 ABCC4O15439 1325 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms