RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 ANP32EQ9BTT0 268 aa20.52■□□□□ 0.88
USP8-208ENST00000559329 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
USP8-208ENST00000559329 PIK3C2AO00443 1686 aa20.51■□□□□ 0.87
USP8-208ENST00000559329 IGHDP01880 384 aa20.5■□□□□ 0.87
USP8-208ENST00000559329 ZKSCAN2Q63HK3 967 aa20.5■□□□□ 0.87
USP8-208ENST00000559329 SSH1Q8WYL5 1049 aa20.5■□□□□ 0.87
USP8-208ENST00000559329 USP54Q70EL1 1684 aa20.49■□□□□ 0.87
USP8-208ENST00000559329 EIF4A2Q14240 407 aaKnown RBP20.49■□□□□ 0.87
USP8-208ENST00000559329 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
USP8-208ENST00000559329 PMFBP1Q8TBY8 1022 aa20.48■□□□□ 0.87
USP8-208ENST00000559329 SMC4Q9NTJ3 1288 aa20.48■□□□□ 0.87
USP8-208ENST00000559329 ZNF853P0CG23 659 aa20.47■□□□□ 0.87
USP8-208ENST00000559329 MVPQ14764 893 aaKnown RBP20.47■□□□□ 0.87
USP8-208ENST00000559329 ANKLE2Q86XL3 938 aa20.47■□□□□ 0.87
USP8-208ENST00000559329 MARF1Q9Y4F3 1742 aaKnown RBP20.46■□□□□ 0.87
USP8-208ENST00000559329 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
USP8-208ENST00000559329 IFT57Q9NWB7 429 aa20.46■□□□□ 0.87
USP8-208ENST00000559329 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
USP8-208ENST00000559329 DZIP1LQ8IYY4 767 aaKnown RBP20.45■□□□□ 0.86
USP8-208ENST00000559329 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
USP8-208ENST00000559329 SETD1BQ9UPS6 1966 aaKnown RBP20.45■□□□□ 0.86
USP8-208ENST00000559329 TRIM27P14373 513 aa20.45■□□□□ 0.86
USP8-208ENST00000559329 ANP32AP39687 249 aaKnown RBP20.45■□□□□ 0.86
USP8-208ENST00000559329 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
USP8-208ENST00000559329 BRPF1P55201 1214 aaPredicted RBP20.44■□□□□ 0.86
USP8-208ENST00000559329 THUMPD2Q9BTF0 503 aaKnown RBP20.44■□□□□ 0.86
USP8-208ENST00000559329 PCDHB15Q9Y5E8 787 aa20.44■□□□□ 0.86
USP8-208ENST00000559329 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
USP8-208ENST00000559329 SBNO1A3KN83 1393 aa20.43■□□□□ 0.86
USP8-208ENST00000559329 MAP3K19Q56UN5 1328 aa20.43■□□□□ 0.86
USP8-208ENST00000559329 KIF16BQ96L93 1317 aa20.43■□□□□ 0.86
USP8-208ENST00000559329 GNAI1P63096 354 aa20.43■□□□□ 0.86
USP8-208ENST00000559329 ATF7IPQ6VMQ6 1270 aa20.43■□□□□ 0.86
USP8-208ENST00000559329 AEBP1Q8IUX7 1158 aa20.43■□□□□ 0.86
USP8-208ENST00000559329 ARHGEF10O15013 1369 aa20.41■□□□□ 0.86
USP8-208ENST00000559329 FLT4P35916 1363 aa20.41■□□□□ 0.86
USP8-208ENST00000559329 SULT6B1Q6IMI4 303 aa20.41■□□□□ 0.86
USP8-208ENST00000559329 FTSJ3Q8IY81 847 aaKnown RBP20.41■□□□□ 0.86
USP8-208ENST00000559329 IPO9Q96P70 1041 aaKnown RBP20.41■□□□□ 0.86
USP8-208ENST00000559329 NOB1Q9ULX3 412 aaKnown RBP20.41■□□□□ 0.86
USP8-208ENST00000559329 CFAP44Q96MT7 982 aa20.4■□□□□ 0.86
USP8-208ENST00000559329 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
USP8-208ENST00000559329 VAMP4O75379 141 aa20.39■□□□□ 0.85
USP8-208ENST00000559329 FAM161AQ3B820 660 aa20.38■□□□□ 0.85
USP8-208ENST00000559329 C8orf34Q49A92 452 aa20.38■□□□□ 0.85
USP8-208ENST00000559329 ADGRL3Q9HAR2 1447 aa20.38■□□□□ 0.85
USP8-208ENST00000559329 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
USP8-208ENST00000559329 KDRP35968 1356 aa20.38■□□□□ 0.85
USP8-208ENST00000559329 IPO8O15397 1037 aaKnown RBP20.37■□□□□ 0.85
USP8-208ENST00000559329 KIF24Q5T7B8 1368 aa20.37■□□□□ 0.85
USP8-208ENST00000559329 NPHP4O75161 1426 aaPredicted RBP20.37■□□□□ 0.85
USP8-208ENST00000559329 FAM83GA6ND36 823 aa20.37■□□□□ 0.85
USP8-208ENST00000559329 RGS3P49796 1198 aa20.37■□□□□ 0.85
USP8-208ENST00000559329 DDX19BQ9UMR2 479 aa20.37■□□□□ 0.85
USP8-208ENST00000559329 NOP58Q9Y2X3 529 aaKnown RBP20.37■□□□□ 0.85
USP8-208ENST00000559329 TSPYL6Q8N831 410 aa20.35■□□□□ 0.85
USP8-208ENST00000559329 NWD1Q149M9 1564 aa20.35■□□□□ 0.85
USP8-208ENST00000559329 SOX12O15370 315 aa20.35■□□□□ 0.85
USP8-208ENST00000559329 MRPL50Q8N5N7 158 aaKnown RBP20.35■□□□□ 0.85
USP8-208ENST00000559329 VIRMAQ69YN4 1812 aaKnown RBP20.35■□□□□ 0.85
USP8-208ENST00000559329 TMEM57Q8N5G2 664 aa20.34■□□□□ 0.85
USP8-208ENST00000559329 RWDD1Q9H446 243 aaPredicted RBP20.34■□□□□ 0.85
USP8-208ENST00000559329 IGSF1Q8N6C5 1336 aa20.34■□□□□ 0.85
USP8-208ENST00000559329 DCTN1Q14203 1278 aa20.33■□□□□ 0.85
USP8-208ENST00000559329 ARHGAP45Q92619 1136 aa20.33■□□□□ 0.85
USP8-208ENST00000559329 NLRP6P59044 892 aa20.33■□□□□ 0.84
USP8-208ENST00000559329 PHF8Q9UPP1 1060 aa20.33■□□□□ 0.84
USP8-208ENST00000559329 ITPRIPQ8IWB1 547 aa20.32■□□□□ 0.84
USP8-208ENST00000559329 PAK3O75914 559 aaPredicted RBP20.31■□□□□ 0.84
USP8-208ENST00000559329 MYT1Q01538 1121 aa20.31■□□□□ 0.84
USP8-208ENST00000559329 HDAC1Q13547 482 aaPredicted RBP20.31■□□□□ 0.84
USP8-208ENST00000559329 TWISTNBQ3B726 338 aaPredicted RBP20.31■□□□□ 0.84
USP8-208ENST00000559329 ERICH6Q7L0X2 663 aa20.31■□□□□ 0.84
USP8-208ENST00000559329 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
USP8-208ENST00000559329 ZBTB40Q9NUA8 1239 aa20.31■□□□□ 0.84
USP8-208ENST00000559329 CRB1P82279 1406 aa20.3■□□□□ 0.84
USP8-208ENST00000559329 AMPHP49418 695 aa20.3■□□□□ 0.84
USP8-208ENST00000559329 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
USP8-208ENST00000559329 CHL1O00533 1208 aa20.29■□□□□ 0.84
USP8-208ENST00000559329 EYA1Q99502 592 aa20.29■□□□□ 0.84
USP8-208ENST00000559329 NFAT5O94916 1531 aa20.28■□□□□ 0.84
USP8-208ENST00000559329 HOXC9P31274 260 aa20.28■□□□□ 0.84
USP8-208ENST00000559329 ABTB2Q8N961 1025 aa20.28■□□□□ 0.84
USP8-208ENST00000559329 PDZRN3Q9UPQ7 1066 aa20.28■□□□□ 0.84
USP8-208ENST00000559329 RTL1A6NKG5 1358 aa20.28■□□□□ 0.84
USP8-208ENST00000559329 ABCC4O15439 1325 aa20.27■□□□□ 0.84
USP8-208ENST00000559329 KIAA0232Q92628 1395 aa20.27■□□□□ 0.84
USP8-208ENST00000559329 MCM10Q7L590 875 aa20.27■□□□□ 0.84
USP8-208ENST00000559329 RBM33Q96EV2 1170 aaKnown RBP20.27■□□□□ 0.84
USP8-208ENST00000559329 LRRC37A3O60309 1634 aa20.26■□□□□ 0.83
USP8-208ENST00000559329 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
USP8-208ENST00000559329 ZBTB47Q9UFB7 747 aaPredicted RBP20.26■□□□□ 0.83
USP8-208ENST00000559329 ELL2O00472 640 aaPredicted RBP20.25■□□□□ 0.83
USP8-208ENST00000559329 NUTM2GQ5VZR2 741 aa20.25■□□□□ 0.83
USP8-208ENST00000559329 LTN1O94822 1766 aa20.25■□□□□ 0.83
USP8-208ENST00000559329 PHRF1Q9P1Y6 1649 aaKnown RBP20.25■□□□□ 0.83
USP8-208ENST00000559329 SMC5Q8IY18 1101 aa20.23■□□□□ 0.83
USP8-208ENST00000559329 FOXO3O43524 673 aa20.23■□□□□ 0.83
USP8-208ENST00000559329 ZBTB7BO15156 539 aaPredicted RBP20.22■□□□□ 0.83
USP8-208ENST00000559329 GAS2L2Q8NHY3 880 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms