RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, human

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-215	ENST00000559201	SBNO1	A3KN83	1393 aa		13.81	□□□□□ -0.2
LRRC49-215	ENST00000559201	ADGRL3	Q9HAR2	1447 aa		13.81	□□□□□ -0.2
LRRC49-215	ENST00000559201	IPO8	O15397	1037 aa	Known RBP	13.8	□□□□□ -0.2
LRRC49-215	ENST00000559201	NLRP6	P59044	892 aa		13.8	□□□□□ -0.2
LRRC49-215	ENST00000559201	EIF4A2	Q14240	407 aa	Known RBP	13.8	□□□□□ -0.2
LRRC49-215	ENST00000559201	FANCI	Q9NVI1	1328 aa		13.8	□□□□□ -0.2
LRRC49-215	ENST00000559201	NCOA3	Q9Y6Q9	1424 aa		13.8	□□□□□ -0.2
LRRC49-215	ENST00000559201	LMTK3	Q96Q04	1460 aa		13.8	□□□□□ -0.2
LRRC49-215	ENST00000559201	LRRC7	Q96NW7	1537 aa		13.8	□□□□□ -0.2
LRRC49-215	ENST00000559201	FBLN1	P23142	703 aa		13.79	□□□□□ -0.2
LRRC49-215	ENST00000559201	BRPF1	P55201	1214 aa	Predicted RBP	13.79	□□□□□ -0.2
LRRC49-215	ENST00000559201	FLT4	P35916	1363 aa		13.79	□□□□□ -0.2
LRRC49-215	ENST00000559201	NRK	Q7Z2Y5	1582 aa		13.79	□□□□□ -0.2
LRRC49-215	ENST00000559201	HMOX1	P09601	288 aa		13.78	□□□□□ -0.2
LRRC49-215	ENST00000559201	AMPH	P49418	695 aa		13.78	□□□□□ -0.2
LRRC49-215	ENST00000559201	C20orf194	Q5TEA3	1177 aa		13.78	□□□□□ -0.2
LRRC49-215	ENST00000559201	ZKSCAN2	Q63HK3	967 aa		13.78	□□□□□ -0.2
LRRC49-215	ENST00000559201	CHMP4B	Q9H444	224 aa	Known RBP	13.78	□□□□□ -0.2
LRRC49-215	ENST00000559201	ARHGEF10	O15013	1369 aa		13.78	□□□□□ -0.2
LRRC49-215	ENST00000559201	CHD2	O14647	1828 aa	Known RBP	13.77	□□□□□ -0.21
LRRC49-215	ENST00000559201	EXOSC9	Q06265	439 aa	Known RBP	13.77	□□□□□ -0.21
LRRC49-215	ENST00000559201	PSME1	Q06323	249 aa		13.77	□□□□□ -0.21
LRRC49-215	ENST00000559201	MAP3K19	Q56UN5	1328 aa		13.77	□□□□□ -0.21
LRRC49-215	ENST00000559201	C14orf37	Q86TY3	774 aa		13.77	□□□□□ -0.21
LRRC49-215	ENST00000559201	ABTB2	Q8N961	1025 aa		13.77	□□□□□ -0.21
LRRC49-215	ENST00000559201	KCNH5	Q8NCM2	988 aa		13.77	□□□□□ -0.21
LRRC49-215	ENST00000559201	PHACTR3	Q96KR7	559 aa		13.77	□□□□□ -0.21
LRRC49-215	ENST00000559201	HTATSF1	O43719	755 aa	Known RBP	13.76	□□□□□ -0.21
LRRC49-215	ENST00000559201	ZNF853	P0CG23	659 aa		13.76	□□□□□ -0.21
LRRC49-215	ENST00000559201	SULT6B1	Q6IMI4	303 aa		13.76	□□□□□ -0.21
LRRC49-215	ENST00000559201	PROSER2	Q86WR7	435 aa	Predicted RBP	13.76	□□□□□ -0.21
LRRC49-215	ENST00000559201	CFAP44	Q96MT7	982 aa		13.76	□□□□□ -0.21
LRRC49-215	ENST00000559201	C19orf44	Q9H6X5	657 aa		13.76	□□□□□ -0.21
LRRC49-215	ENST00000559201	FMN2	Q9NZ56	1722 aa		13.76	□□□□□ -0.21
LRRC49-215	ENST00000559201	KIF16B	Q96L93	1317 aa		13.75	□□□□□ -0.21
LRRC49-215	ENST00000559201	HSP90AB2P	Q58FF8	381 aa		13.75	□□□□□ -0.21
LRRC49-215	ENST00000559201	FRAT1	Q92837	279 aa	Predicted RBP	13.75	□□□□□ -0.21
LRRC49-215	ENST00000559201	RTL1	A6NKG5	1358 aa		13.74	□□□□□ -0.21
LRRC49-215	ENST00000559201	KDM2B	Q8NHM5	1336 aa		13.74	□□□□□ -0.21
LRRC49-215	ENST00000559201	ESCO1	Q5FWF5	840 aa		13.74	□□□□□ -0.21
LRRC49-215	ENST00000559201	GAS2L2	Q8NHY3	880 aa		13.74	□□□□□ -0.21
LRRC49-215	ENST00000559201	SMC4	Q9NTJ3	1288 aa		13.74	□□□□□ -0.21
LRRC49-215	ENST00000559201	MAP2	P11137	1827 aa	Known RBP	13.74	□□□□□ -0.21
LRRC49-215	ENST00000559201	PAK3	O75914	559 aa	Predicted RBP	13.73	□□□□□ -0.21
LRRC49-215	ENST00000559201	DZIP1L	Q8IYY4	767 aa	Known RBP	13.73	□□□□□ -0.21
LRRC49-215	ENST00000559201	ARHGAP45	Q92619	1136 aa		13.73	□□□□□ -0.21
LRRC49-215	ENST00000559201	TSR2	Q969E8	191 aa	Known RBP	13.73	□□□□□ -0.21
LRRC49-215	ENST00000559201	CLUAP1	Q96AJ1	413 aa		13.73	□□□□□ -0.21
LRRC49-215	ENST00000559201	NWD1	Q149M9	1564 aa		13.73	□□□□□ -0.21
LRRC49-215	ENST00000559201	NALCN	Q8IZF0	1738 aa		13.72	□□□□□ -0.21
LRRC49-215	ENST00000559201	IGSF1	Q8N6C5	1336 aa		13.71	□□□□□ -0.21
LRRC49-215	ENST00000559201	ATF7IP	Q6VMQ6	1270 aa		13.71	□□□□□ -0.21
LRRC49-215	ENST00000559201	FTSJ3	Q8IY81	847 aa	Known RBP	13.71	□□□□□ -0.21
LRRC49-215	ENST00000559201	SSH1	Q8WYL5	1049 aa		13.71	□□□□□ -0.21
LRRC49-215	ENST00000559201	IP6K1	Q92551	441 aa		13.71	□□□□□ -0.21
LRRC49-215	ENST00000559201	DDX19B	Q9UMR2	479 aa		13.71	□□□□□ -0.21
LRRC49-215	ENST00000559201	KDR	P35968	1356 aa		13.71	□□□□□ -0.22
LRRC49-215	ENST00000559201	HOXC9	P31274	260 aa		13.7	□□□□□ -0.22
LRRC49-215	ENST00000559201	MVP	Q14764	893 aa	Known RBP	13.7	□□□□□ -0.22
LRRC49-215	ENST00000559201	RTF1	Q92541	710 aa	Known RBP	13.7	□□□□□ -0.22
LRRC49-215	ENST00000559201	RWDD1	Q9H446	243 aa	Predicted RBP	13.7	□□□□□ -0.22
LRRC49-215	ENST00000559201	BABAM1	Q9NWV8	329 aa		13.7	□□□□□ -0.22
LRRC49-215	ENST00000559201	COG6	Q9Y2V7	657 aa		13.7	□□□□□ -0.22
LRRC49-215	ENST00000559201	VAMP4	O75379	141 aa		13.69	□□□□□ -0.22
LRRC49-215	ENST00000559201	ATF3	P18847	181 aa		13.69	□□□□□ -0.22
LRRC49-215	ENST00000559201	PANK1	Q8TE04	598 aa		13.69	□□□□□ -0.22
LRRC49-215	ENST00000559201	EYA1	Q99502	592 aa		13.69	□□□□□ -0.22
LRRC49-215	ENST00000559201	LAS1L	Q9Y4W2	734 aa	Known RBP	13.69	□□□□□ -0.22
LRRC49-215	ENST00000559201	DCC	P43146	1447 aa		13.69	□□□□□ -0.22
LRRC49-215	ENST00000559201	USP54	Q70EL1	1684 aa		13.69	□□□□□ -0.22
LRRC49-215	ENST00000559201	CHL1	O00533	1208 aa		13.68	□□□□□ -0.22
LRRC49-215	ENST00000559201	SOCS7	O14512	581 aa		13.68	□□□□□ -0.22
LRRC49-215	ENST00000559201	HOXD11	P31277	338 aa	Predicted RBP	13.68	□□□□□ -0.22
LRRC49-215	ENST00000559201	KIAA0232	Q92628	1395 aa		13.68	□□□□□ -0.22
LRRC49-215	ENST00000559201	SOS1	Q07889	1333 aa	Predicted RBP	13.67	□□□□□ -0.22
LRRC49-215	ENST00000559201	SOX12	O15370	315 aa		13.67	□□□□□ -0.22
LRRC49-215	ENST00000559201	CADPS2	Q86UW7	1296 aa		13.67	□□□□□ -0.22
LRRC49-215	ENST00000559201	AEBP1	Q8IUX7	1158 aa		13.67	□□□□□ -0.22
LRRC49-215	ENST00000559201	CHMP4A	Q9BY43	222 aa		13.67	□□□□□ -0.22
LRRC49-215	ENST00000559201	API5	Q9BZZ5	524 aa	Known RBP	13.67	□□□□□ -0.22
LRRC49-215	ENST00000559201	MBIP	Q9NS73	344 aa		13.67	□□□□□ -0.22
LRRC49-215	ENST00000559201	NOB1	Q9ULX3	412 aa	Known RBP	13.67	□□□□□ -0.22
LRRC49-215	ENST00000559201	MST1R	Q04912	1400 aa		13.66	□□□□□ -0.22
LRRC49-215	ENST00000559201	TWISTNB	Q3B726	338 aa	Predicted RBP	13.66	□□□□□ -0.22
LRRC49-215	ENST00000559201	KRT28	Q7Z3Y7	464 aa		13.66	□□□□□ -0.22
LRRC49-215	ENST00000559201	MRPL50	Q8N5N7	158 aa	Known RBP	13.65	□□□□□ -0.22
LRRC49-215	ENST00000559201	BCL2L13	Q9BXK5	485 aa		13.65	□□□□□ -0.22
LRRC49-215	ENST00000559201	PIK3C2A	O00443	1686 aa		13.65	□□□□□ -0.22
LRRC49-215	ENST00000559201	C1orf167	Q5SNV9	1468 aa		13.64	□□□□□ -0.23
LRRC49-215	ENST00000559201	TRIM27	P14373	513 aa		13.64	□□□□□ -0.23
LRRC49-215	ENST00000559201	GNAT3	A8MTJ3	354 aa		13.63	□□□□□ -0.23
LRRC49-215	ENST00000559201	FOXO3	O43524	673 aa		13.63	□□□□□ -0.23
LRRC49-215	ENST00000559201	GC	P02774	474 aa		13.63	□□□□□ -0.23
LRRC49-215	ENST00000559201	RLBP1	P12271	317 aa		13.63	□□□□□ -0.23
LRRC49-215	ENST00000559201	PDE4A	P27815	886 aa		13.63	□□□□□ -0.23
LRRC49-215	ENST00000559201	MTHFSD	Q2M296	383 aa	Known RBP	13.63	□□□□□ -0.23
LRRC49-215	ENST00000559201	NUTM2G	Q5VZR2	741 aa		13.63	□□□□□ -0.23
LRRC49-215	ENST00000559201	ORAI2	Q96SN7	254 aa		13.63	□□□□□ -0.23
LRRC49-215	ENST00000559201	BACH2	Q9BYV9	841 aa		13.63	□□□□□ -0.23
LRRC49-215	ENST00000559201	RGPD1	P0DJD0	1748 aa		13.62	□□□□□ -0.23

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