RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
COPS2-206ENST00000559016 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
COPS2-206ENST00000559016 RGPD8O14715 1765 aaPredicted RBP11.3□□□□□ -0.6
COPS2-206ENST00000559016 TTC21AQ8NDW8 1320 aa11.3□□□□□ -0.6
COPS2-206ENST00000559016 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
COPS2-206ENST00000559016 USP6P35125 1406 aa11.29□□□□□ -0.6
COPS2-206ENST00000559016 SSH2Q76I76 1423 aa11.29□□□□□ -0.6
COPS2-206ENST00000559016 KCNA6P17658 529 aa11.29□□□□□ -0.6
COPS2-206ENST00000559016 TNNT2P45379 298 aaPredicted RBP11.29□□□□□ -0.6
COPS2-206ENST00000559016 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
COPS2-206ENST00000559016 CCDC27Q2M243 656 aa11.29□□□□□ -0.6
COPS2-206ENST00000559016 COG3Q96JB2 828 aa11.29□□□□□ -0.6
COPS2-206ENST00000559016 ACEP12821 1306 aa11.29□□□□□ -0.6
COPS2-206ENST00000559016 USP54Q70EL1 1684 aa11.28□□□□□ -0.6
COPS2-206ENST00000559016 IQSEC2Q5JU85 1478 aa11.28□□□□□ -0.6
COPS2-206ENST00000559016 CDK12Q9NYV4 1490 aaPredicted RBP11.28□□□□□ -0.6
COPS2-206ENST00000559016 POTEJP0CG39 1038 aa11.28□□□□□ -0.6
COPS2-206ENST00000559016 RASEFQ8IZ41 740 aa11.28□□□□□ -0.6
COPS2-206ENST00000559016 LRRC7Q96NW7 1537 aa11.28□□□□□ -0.6
COPS2-206ENST00000559016 APAF1O14727 1248 aa11.27□□□□□ -0.61
COPS2-206ENST00000559016 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
COPS2-206ENST00000559016 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
COPS2-206ENST00000559016 TTC21BQ7Z4L5 1316 aa11.27□□□□□ -0.61
COPS2-206ENST00000559016 ADGRL3Q9HAR2 1447 aa11.26□□□□□ -0.61
COPS2-206ENST00000559016 NKTRP30414 1462 aaKnown RBP11.26□□□□□ -0.61
COPS2-206ENST00000559016 E9PSI1 815 aa11.26□□□□□ -0.61
COPS2-206ENST00000559016 DIAPH1O60610 1272 aaKnown RBP11.26□□□□□ -0.61
COPS2-206ENST00000559016 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
COPS2-206ENST00000559016 IER5LQ5T953 404 aa11.26□□□□□ -0.61
COPS2-206ENST00000559016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.26□□□□□ -0.61
COPS2-206ENST00000559016 RCAN3Q9UKA8 241 aa11.26□□□□□ -0.61
COPS2-206ENST00000559016 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
COPS2-206ENST00000559016 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
COPS2-206ENST00000559016 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
COPS2-206ENST00000559016 NCOA3Q9Y6Q9 1424 aa11.26□□□□□ -0.61
COPS2-206ENST00000559016 WDR63Q8IWG1 891 aa11.25□□□□□ -0.61
COPS2-206ENST00000559016 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
COPS2-206ENST00000559016 POLKQ9UBT6 870 aa11.25□□□□□ -0.61
COPS2-206ENST00000559016 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
COPS2-206ENST00000559016 FCHSD2O94868 740 aa11.24□□□□□ -0.61
COPS2-206ENST00000559016 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
COPS2-206ENST00000559016 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
COPS2-206ENST00000559016 DUSP27Q5VZP5 1158 aa11.24□□□□□ -0.61
COPS2-206ENST00000559016 NME9Q86XW9 330 aa11.24□□□□□ -0.61
COPS2-206ENST00000559016 PPP4R2Q9NY27 417 aa11.24□□□□□ -0.61
COPS2-206ENST00000559016 SALL2Q9Y467 1007 aaPredicted RBP11.24□□□□□ -0.61
COPS2-206ENST00000559016 TTLL13PA6NNM8 815 aa11.23□□□□□ -0.61
COPS2-206ENST00000559016 WWC1Q8IX03 1113 aa11.23□□□□□ -0.61
COPS2-206ENST00000559016 CCDC146Q8IYE0 955 aa11.23□□□□□ -0.61
COPS2-206ENST00000559016 TCP11L2Q8N4U5 519 aa11.23□□□□□ -0.61
COPS2-206ENST00000559016 NGDNQ8NEJ9 315 aaKnown RBP11.23□□□□□ -0.61
COPS2-206ENST00000559016 CDCA7LQ96GN5 454 aa11.23□□□□□ -0.61
COPS2-206ENST00000559016 NCKAP5LQ9HCH0 1330 aa11.23□□□□□ -0.61
COPS2-206ENST00000559016 KIF24Q5T7B8 1368 aa11.23□□□□□ -0.61
COPS2-206ENST00000559016 PLEKHF1Q96S99 279 aa11.22□□□□□ -0.61
COPS2-206ENST00000559016 NEFMP07197 916 aa11.21□□□□□ -0.61
COPS2-206ENST00000559016 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
COPS2-206ENST00000559016 FAM212AQ96EL1 285 aa11.21□□□□□ -0.61
COPS2-206ENST00000559016 PIK3C2AO00443 1686 aa11.2□□□□□ -0.62
COPS2-206ENST00000559016 KIF1AQ12756 1690 aa11.2□□□□□ -0.62
COPS2-206ENST00000559016 IL16Q14005 1332 aa11.2□□□□□ -0.62
COPS2-206ENST00000559016 MAPK8IP3Q9UPT6 1336 aa11.2□□□□□ -0.62
COPS2-206ENST00000559016 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
COPS2-206ENST00000559016 DCCP43146 1447 aa11.19□□□□□ -0.62
COPS2-206ENST00000559016 U2SURPO15042 1029 aaKnown RBP11.19□□□□□ -0.62
COPS2-206ENST00000559016 IL13P35225 146 aa11.19□□□□□ -0.62
COPS2-206ENST00000559016 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.19□□□□□ -0.62
COPS2-206ENST00000559016 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
COPS2-206ENST00000559016 TRIM35Q9UPQ4 493 aa11.19□□□□□ -0.62
COPS2-206ENST00000559016 MARF1Q9Y4F3 1742 aaKnown RBP11.18□□□□□ -0.62
COPS2-206ENST00000559016 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
COPS2-206ENST00000559016 TMPOP42166 694 aaKnown RBP11.18□□□□□ -0.62
COPS2-206ENST00000559016 PMFBP1Q8TBY8 1022 aa11.18□□□□□ -0.62
COPS2-206ENST00000559016 SENP3-EIF4A1A0A087X0R7 540 aa11.17□□□□□ -0.62
COPS2-206ENST00000559016 POTEFA5A3E0 1075 aa11.17□□□□□ -0.62
COPS2-206ENST00000559016 CT47B1P0C2W7 299 aaPredicted RBP11.17□□□□□ -0.62
COPS2-206ENST00000559016 RSPH6AQ9H0K4 717 aa11.17□□□□□ -0.62
COPS2-206ENST00000559016 MYH16Q9H6N6 1097 aa11.17□□□□□ -0.62
COPS2-206ENST00000559016 C19orf44Q9H6X5 657 aa11.17□□□□□ -0.62
COPS2-206ENST00000559016 EMILIN1Q9Y6C2 1016 aa11.17□□□□□ -0.62
COPS2-206ENST00000559016 RGPD1P0DJD0 1748 aa11.17□□□□□ -0.62
COPS2-206ENST00000559016 PPM1GO15355 546 aaPredicted RBP11.16□□□□□ -0.62
COPS2-206ENST00000559016 CALD1Q05682 793 aaKnown RBP11.16□□□□□ -0.62
COPS2-206ENST00000559016 PROSER2Q86WR7 435 aaPredicted RBP11.16□□□□□ -0.62
COPS2-206ENST00000559016 PHRF1Q9P1Y6 1649 aaKnown RBP11.16□□□□□ -0.62
COPS2-206ENST00000559016 SBNO1A3KN83 1393 aa11.16□□□□□ -0.62
COPS2-206ENST00000559016 FLT4P35916 1363 aa11.16□□□□□ -0.62
COPS2-206ENST00000559016 PLCG2P16885 1265 aa11.15□□□□□ -0.62
COPS2-206ENST00000559016 PEAK1Q9H792 1746 aa11.15□□□□□ -0.63
COPS2-206ENST00000559016 LMTK3Q96Q04 1460 aa11.14□□□□□ -0.63
COPS2-206ENST00000559016 STRCP1A6NGW2 1772 aa11.14□□□□□ -0.63
COPS2-206ENST00000559016 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
COPS2-206ENST00000559016 IRX6P78412 446 aaPredicted RBP11.14□□□□□ -0.63
COPS2-206ENST00000559016 LMOD3Q0VAK6 560 aa11.14□□□□□ -0.63
COPS2-206ENST00000559016 C14orf37Q86TY3 774 aa11.14□□□□□ -0.63
COPS2-206ENST00000559016 COLQQ9Y215 455 aaPredicted RBP11.14□□□□□ -0.63
COPS2-206ENST00000559016 MST1RQ04912 1400 aa11.14□□□□□ -0.63
COPS2-206ENST00000559016 RTL1A6NKG5 1358 aa11.14□□□□□ -0.63
COPS2-206ENST00000559016 DLG5Q8TDM6 1919 aa11.13□□□□□ -0.63
COPS2-206ENST00000559016 STRCQ7RTU9 1775 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms